Os09g0244900 - Revision history

Rice2012: /* Structured Information */

2015-06-12T09:38:15Z

‎Structured Information

Sinaweb1988: /* References= */

2014-05-19T14:35:15Z

‎References=

Sinaweb1988: /* Labs working on this gene */

2014-05-19T14:28:26Z

‎Labs working on this gene

Sinaweb1988: /* Labs working on this gene */

2014-05-19T14:27:59Z

‎Labs working on this gene

Sinaweb1988: /* Evolution */

2014-05-19T14:22:56Z

‎Evolution

Sinaweb1988: /* Evolution */

2014-05-19T14:15:17Z

‎Evolution

Sinaweb1988: /* Evolution */

2014-05-19T14:14:42Z

‎Evolution

Sinaweb1988: /* Evolution */

2014-05-19T14:14:07Z

‎Evolution

Sinaweb1988: /* Evolution */

2014-05-19T14:12:52Z

‎Evolution

Sinaweb1988: /* References= */

2014-05-19T13:49:53Z

‎References=

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 ==Structured Information==
 [[Category:Genes]]
 [[Category:Japonica mRNA]]

← Older revision		Revision as of 14:35, 19 May 2014
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	<ref name="ref2"> Shenshen Zou, Yutao Liu, [...], and Nava Segev.Modular TRAPP Complexes Regulate Intracellular Protein Trafficking Through Multiple Ypt/Rab GTPases in Saccharomyces cerevisiae.Genetics. Jun 2012; 191(2): 451–460.</ref>		<ref name="ref2"> Shenshen Zou, Yutao Liu, [...], and Nava Segev.Modular TRAPP Complexes Regulate Intracellular Protein Trafficking Through Multiple Ypt/Rab GTPases in Saccharomyces cerevisiae.Genetics. Jun 2012; 191(2): 451–460.</ref>

−	~~<ref name="ref3"> Michael Sacher, Yeon-Gil Kim, [...], and Nava Segev.The TRAPP Complex: Insights into its Architecture and Function.Traffic. Dec 2008; 9(12): 2032–2042.</ref>~~

	</references>		</references>

@@ Line 13: / Line 13: @@
 ==Labs working on this gene==
 Yale University, Department of Molecular Biophysics & Biochemistry, 260 Whitney Avenue, New Haven 06520
 Department of Cell Biology, Yale University School of Medicine, 333 Cedar Street, New Haven, Connecticut 06520
 The Howard Hughes Medical Institute and the Department of Cellular and Molecular Medicine, University of California at San Diego, La Jolla, CA 92093-0668
 Department of Biochemistry and Molecular Genetics, University of Illinois, 900 S. Ashland Ave., Chicago, IL 60607.
 College of Life Sciences, Nanjing Agricultural University, Nanjing 210095, People’s Republic of China.

@@ Line 12: / Line 12: @@
 ==Labs working on this gene==
-Please input related labs here.
+Yale University, Department of Molecular Biophysics & Biochemistry, 260 Whitney Avenue, New Haven 06520
 ==References===

@@ Line 8: / Line 8: @@
 Ypt/Rabs are activated by guanine-nucleotide exchange factors (GEFs) and the GEF for Ypt1 and Ypt31/32 is the TRAPP complex. TRAPP is a multisubunit modular complex (Sacher et al. 2008), which exists in at least three forms. TRAPP I, which contains five essential subunits, acts as a GEF for Ypt1 (Jones et al. 2000; Wang et al. 2000), and is required for ER-to-Golgi transport (Sacher et al. 1998). Trs85, a TRAPP subunit, nonessential for cell viability, plays a role in autophagy (Meiling-Wesse et al. 2005; Nazarko et al. 2005). A Trs85-containing TRAPP complex, termed TRAPP III, also acts as a Ypt1 GEF (Lynch-Day et al. 2010). TRAPP II, which contains Trs120 and Trs130 in addition to TRAPP I subunits, functions at the trans-Golgi (Sacher et al. 2001). However, currently the Ypt GEF specificity of the TRAPP II complex is under dispute.<ref name="ref2" />.
-===Evolution===
+===Extention===
 The interaction of Ypt1p with guanine nucleotides (GDP or GTP) and TRAPP, as with other GTPases and exchange factors,2 is defined by the following closed, cyclic reaction scheme of linked equilibria (Figure 1[[File:Nihms-121360-f0006.jpg|right|thumb|120px|Figure 1(from reference <ref name="ref1" />).]]): where GNP represents either GDP or GTP and Ki represent the overall dissociation equilibrium constants for binding of a given ligand. The results in the following sections are discussed in terms of this Scheme, which has been used in characterizing other exchange factors.

@@ Line 9: / Line 9: @@
 ===Evolution===
-The interaction of Ypt1p with guanine nucleotides (GDP or GTP) and TRAPP, as with other GTPases and exchange factors,2 is defined by the following closed, cyclic reaction scheme of linked equilibria ([[File:Nihms-121360-f0006.jpg|right|thumb|120px|Figure 1．Scheme1.(from reference <ref name="ref1" />).]]): where GNP represents either GDP or GTP and Ki represent the overall dissociation equilibrium constants for binding of a given ligand. The results in the following sections are discussed in terms of this Scheme, which has been used in characterizing other exchange factors.
+The interaction of Ypt1p with guanine nucleotides (GDP or GTP) and TRAPP, as with other GTPases and exchange factors,2 is defined by the following closed, cyclic reaction scheme of linked equilibria (Figure 1[[File:Nihms-121360-f0006.jpg|right|thumb|120px|Figure 1．Scheme1.(from reference <ref name="ref1" />).]]): where GNP represents either GDP or GTP and Ki represent the overall dissociation equilibrium constants for binding of a given ligand. The results in the following sections are discussed in terms of this Scheme, which has been used in characterizing other exchange factors.
 ==Labs working on this gene==

@@ Line 22: / Line 22: @@
 <ref name="ref2"> Shenshen Zou, Yutao Liu, [...], and Nava Segev.Modular TRAPP Complexes Regulate Intracellular Protein Trafficking Through Multiple Ypt/Rab GTPases in Saccharomyces cerevisiae.Genetics. Jun 2012; 191(2): 451–460.</ref>
-<ref name="ref3"> Stephanie Brunet, Baraa Noueihed, [...], and Michael Sacher.The SMS domain of Trs23p is responsible for the in vitro appearance of the TRAPP I complex in Saccharomyces cerevisiae.Cell Logist. Jan 1, 2012; 2(1): 28–42.</ref>
+<ref name="ref3"> Michael Sacher, Yeon-Gil Kim, [...], and Nava Segev.The TRAPP Complex: Insights into its Architecture and Function.Traffic. Dec 2008; 9(12): 2032–2042.</ref>
 </references>