Os09g0451500 - Revision history

Rice2012: /* Structured Information */

2015-06-12T09:44:48Z

‎Structured Information

Snowzll: /* Function */

2014-06-05T04:04:08Z

‎Function

Snowzll: /* References */

2014-06-05T04:02:39Z

‎References

Snowzll: /* Labs working on this gene */

2014-06-05T04:02:01Z

‎Labs working on this gene

Snowzll: /* Expression */

2014-06-05T03:59:25Z

‎Expression

Snowzll: /* Function */

2014-06-05T03:58:59Z

‎Function

Snowzll: /* Evolution */

2014-06-05T03:57:21Z

‎Evolution

Snowzll: /* Function */

2014-06-05T03:56:52Z

‎Function

124.16.129.48 at 21:00, 22 July 2012

2012-07-22T21:00:18Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os09g0451500| Description = Thioredoxin domain 2 containing protein| Version = NM_001069866.1 GI:115479474 GeneID:4347226| Length = 4864 bp| De..."

2012-06-21T07:27:39Z

Created page with "{{JaponicaGene| GeneName = Os09g0451500| Description = Thioredoxin domain 2 containing protein| Version = NM_001069866.1 GI:115479474 GeneID:4347226| Length = 4864 bp| De..."

New page

{{JaponicaGene|
GeneName = Os09g0451500|
Description = Thioredoxin domain 2 containing protein|
Version = NM_001069866.1 GI:115479474 GeneID:4347226|
Length = 4864 bp|
Definition = Oryza sativa Japonica Group Os09g0451500, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 9|Chromosome 9]]|
AP = Chromosome 9:17584752..17589615|
CDS = 17584851..17584976,17585080..17585238,17586351..17586464,17587063..17587244,17587504..17587603<br>,17588180..17588356,17588446..17588588,17588992..17589141,17589224..17589398<br>|
GCID = <gbrowseImage1>
name=NC_008402:17584752..17589615
source=RiceChromosome09
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008402:17584752..17589615
source=RiceChromosome09
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atgcgccccgcggtcgccgccgccctcctcctcgtcgccgccgccgtcgcggcctcgccggtttccgccctctactccgccggctctcccgtcctccagttcaaccccaacaacttcaaatccaaggtgctgaactcgaatggggtggtgctggtggagttcttcgcgccgtggtgcgggcactgccagcagctgacgccgatttgggagaaggccgcgggcgtcctcaagggcgtcgccacggtcgccgcgctcgacgccgacgcgcacaaggagctcgcgcaggaatatggaataagaggatttccaactattaaggtgtttgttcctggaaagcctccagtagattatcaaggagcaagagatgtaaagccaattgttgaatttgctctttcacaggtcaaggctcttcttagagatcggttgaatggaaagacatcagcaggttcaggtggcaagaaatcaggtggttcaagtgagaaaactgaaccaagtgcgtcaatagaattaaattctcaaaacttcgataaacttgtcaccaaaagcaaggatctttggattgttgagttctttgcaccatggtgtgggcactgcaagaaattggcacctgaatggaaaaaggctgcaaagaacttgaagggccaagtgaagctaggtcatgtggattgtgatgctgaaaagtctttgatgagcaagtacaaggtagaaggctttcctactattttggtatttggtgccgataaggagagcccattcccttaccagggggctagagttgcctctgctatcgagtcctttgcattggagcagttggaagccaatgctgctccacctgaagtttctgagttgactggcccagacgccatggaagagaaatgtgcttctgctgccatttgctttgtatctttccttccagatatcttggattcaaaggccgaaggaagaaacaagtaccttgagctgctattatctgttgctgagaaatttaaaaagagtccatacagttttgtctggacagctgctgggaagcaagctgatcttgagaagcaagttggagttggtggttatggctatccagcgatggttgctctcaacgtgaaaaaaggcgcatatgctccactccgtagtgctttccagcttgatgaaataactgagtttgtgaaggaagcagggcgcggtgggaagggtaatcttcctttggacggtaccccaacgatagtccaatctgaaccatgggacggcaaagatggtgaggttattgaagaggacgaattctcccttgaggagctgatggccgacaactctccagtaaatgacgagttgtga</cdnaseq>|
AA = <aaseq>MRPAVAAALLLVAAAVAASPVSALYSAGSPVLQFNPNNFKSKVL NSNGVVLVEFFAPWCGHCQQLTPIWEKAAGVLKGVATVAALDADAHKELAQEYGIRGF PTIKVFVPGKPPVDYQGARDVKPIVEFALSQVKALLRDRLNGKTSAGSGGKKSGGSSE KTEPSASIELNSQNFDKLVTKSKDLWIVEFFAPWCGHCKKLAPEWKKAAKNLKGQVKL GHVDCDAEKSLMSKYKVEGFPTILVFGADKESPFPYQGARVASAIESFALEQLEANAA PPEVSELTGPDAMEEKCASAAICFVSFLPDILDSKAEGRNKYLELLLSVAEKFKKSPY SFVWTAAGKQADLEKQVGVGGYGYPAMVALNVKKGAYAPLRSAFQLDEITEFVKEAGR GGKGNLPLDGTPTIVQSEPWDGKDGEVIEEDEFSLEELMADNSPVNDEL</aaseq>|
DNA = <dnaseqindica>100..225#329..487#1600..1713#2312..2493#2753..2852#3429..3605#3695..3837#4241..4390#4473..4647#cctcgcgagcgaacttaaaatcgcagtcgcaccccggcgccgatcgcaaggtccacctcctcccctctccactccttctagaaccttctcgaccccgccatgcgccccgcggtcgccgccgccctcctcctcgtcgccgccgccgtcgcggcctcgccggtttccgccctctactccgccggctctcccgtcctccagttcaaccccaacaacttcaaatccaaggtctctcgatcgactcccccctcacactcttcccttccgtctccggatcggcttcccttacttgggggctctcgctgagttcgaatttcggttgggggtgcaggtgctgaactcgaatggggtggtgctggtggagttcttcgcgccgtggtgcgggcactgccagcagctgacgccgatttgggagaaggccgcgggcgtcctcaagggcgtcgccacggtcgccgcgctcgacgccgacgcgcacaaggagctcgcgcaggtgagcaaacgtcctgtttggcatctcggttcattgggattggctgatctaccttttcctggtgtgatctgatctctgcatcagttgttgcgtcaacgtaatttgatcgagctaggacataactgcgtatatgcaatgtgcaaactcgactccataaaaaaaaaagttacacctgttatgggttttttgtgtagctctcagtatcagagagtacaatgccacatttgtttggtggaggaaatatgggaagatcaatgtttggtgtctacacgtactgatcaaaaaggggcgtcgtttttattttttaaaggagggcattaacatcggatatgagttatacaataccgaattaatgcatattaaaatgctgtagctgggattaatattgatggaatgtggtgcattgttgatttcatacagtaaatttatttattttttcactttttcagcatggtgattggatgctgttctcttttttttaaaaaaaataacctggattttgaattatattgaacgaattaagcattttaattggtgttaattagggttttatctgtttttcttttgatccgaaggtgagagcggccttggttagtttattgccaataaaagtgtatatgtgactttagatgtgggaaatgcatacttttatgaaggacgaaaccgtggaagccaatgggttgtgcaactttacaatatctgatgcaacattgtttattggtgaatcagaaaattaggttatgtatcccagattctctaactgaaaatttagtcactcatcaaatgaaataaaggcatctatcctgagagaaggcaagcaagagtgaaagatagttatgtacctttgccattgtacctgcagtgcggtgattttgagtctctgtcatatttagacatatatttttttttacagtaattttacagtatcatgcttattgaccaagaggcattttttagctacgttatatctttgttttggtgagtattagtcttctgtctaggctaaatcaataaaaactgcacattagaacgtcttccaccattgccatttgtaaatattttgactggatgctatcaagtttttcctgatgcatgatgcctttgttctgcaggaatatggaataagaggatttccaactattaaggtgtttgttcctggaaagcctccagtagattatcaaggagcaagagatgtaaagccaattgttgaatttgctctttcacaggtttgttgcagcttgccctatttgatatatataaaaatgatatgttgtttttacttttattgctcctgttctatctgccactccactagtgtatacaactacaaatccttttctgaagatgttaagtgcttcctggattttcacagaccaaacttattcagattgcaattgtcagctgaatgttgacataaataacttttatcttaacatgaagtattactaggggggaaaaacaacagatatcatatatcaactgatactaatgtcctaggtagctaattgattttgctatatatctccctcaaatgctaaacctttcaaacttatcaactttttatatgggatactggatatgaggtgatgcagtgatgcttctcagttcttaccatggtggagctttatgtacctgctcttgcacagctggtgcttctggtagcacccatgattttcgttaaaaaatacactgtctgtcgctgctgtgttacagtgggttgccattttaccttttttttttgggtatttctctgtaaaaaatttcagccttgtgacacacgatatgagtttccacttttaaatacaatgaatctgtatcctacaggtcaaggctcttcttagagatcggttgaatggaaagacatcagcaggttcaggtggcaagaaatcaggtggttcaagtgagaaaactgaaccaagtgcgtcaatagaattaaattctcaaaacttcgataaacttgtcaccaaaagcaaggatctttggattgttgagttctttgcaccatggtatgtggcttaatgcatttatggttttcatgttgactgatttattctttactgttgtttctgaacttaactctgaatccaaaagtagagaaggaaagtgaagaaaaacacaaaatttcatacaatttagtcacatgttagtattgtagtgtgtacattttagatcattgcccttaagattatgttgttcaagataataagtaaatcctgttaactgaagacattatttgactcattaactgtactggtcttttgtaaggtgtgggcactgcaagaaattggcacctgaatggaaaaaggctgcaaagaacttgaagggccaagtgaagctaggtcatgtggattgtgatgctgaaaaggttcttgccctttttctatttggtcataagtttttgttgtatgtgcatttcttgtttgcaaataatttatacaaaattataaactgaaatttgacaatgcattggatatttcatcaattcaaaggactttgataaaggtattgtaaaataaaattaaactgagggttagcactctagtttatagggacacaatcaggatatgcataggaaagtacaaaatgctgtatcaaggaaagcaatggcctaactttatcctaaggcatttgttgggatcttattttgtgctgttttaggttgtctctttaacagtttaacatgatgtactatgattgaagttttatgtttttttttctagaatactaattcaagtgtttggtcagttgataaaagttaccgagtgagtttaaatgaacttaggcagaaaattcaggcagtgtatcagtatatttataaaacacagttaatgtttgacctttttaaagcattcatgtgcgttctgtacaacatttgtcaaactatacaacctagttttcaagtaccacttatgtaacataacgtgtgacttgaattttgcagtctttgatgagcaagtacaaggtagaaggctttcctactattttggtatttggtgccgataaggagagcccattcccttaccagggggctagagttgcctctgctatcgagtcctttgcattggagcagttggaagccaatgctgctccacctgaagtttctgagttgactggcccagtaagttttcgtgatattaacaaagttatccttttgtggagacaatggtctgggattgatgttttgacgaggtggtttggcttctgtaggacgccatggaagagaaatgtgcttctgctgccatttgctttgtatctttccttccagatatcttggattcaaaggccgaaggaagaaacaagtaccttgagctgctattatctgttgctgagaaatttaaaaagagtccatacaggcaagattcaactaaacttgttgtggactttataccattctacctatcattccttgtcttgttatgtcttttgagataaaaaaatccacagttaaattgatacattaatttccttttgctattgaatattgattgacaaaaagattgatagtaaccttcatatatttgaaacaccttaaaagaattaaatgacttagttcgataatgttatatgccaaggcgtgtatactataagctctaaacataatggagattttatatattatatatgcaaatctgccatgtgactgagttctatgttgagaagtttcctcagacaaatccattcacttagttaatgccttgaaatctcttccgtttcttgagaaagccattctgagctagaaaaagcattgtcttgcagttttgtctggacagctgctgggaagcaagctgatcttgagaagcaagttggagttggtggttatggctatccagcgatggttgctctcaacgtgaaaaaaggcgcatatgctccactccgtagtgctttccagcttgatgaaataacgtaagttccttgtgcatagaaaattaattgctgcttaaggttcatttgccagatgtttgataacaaaaccggtctcctgcagtgagtttgtgaaggaagcagggcgcggtgggaagggtaatcttcctttggacggtaccccaacgatagtccaatctgaaccatgggacggcaaagatggtgaggttattgaagaggacgaattctcccttgaggagctgatggccgacaactctccagtaaatgacgagttgtgattctgataattccggaaatgatgttagagttgattagccagactgtaaatctgagtaacactaatgcttcactcgtgtcaactgtacaatttgggcgggacaattttcagaatgctcctttggtgttattacagtacattttagttgaagaaaaacatcgtttgtggtcttttaggagggatgcttttctctgggaaataaaactacttcgtaatct</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001069866.1 RefSeq:Os09g0451500]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 9]]
[[Category:Chromosome 9]]

← Older revision		Revision as of 04:04, 5 June 2014
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	===Function===		===Function===

		+	Protein disulfide isomerase (PDI), a ubiquitous sulfhydryl oxidoreductase found in all eukaryotic cells, is multifunctional enzyme, which catalyzes a wide range of thiol-disulfide exchange reactions, including oxidation, reduction, and isomerization, and also displays chaperone activity.
	PDIL2;3 and PDIL1;1 are not functionally redundant in sulfhydryl oxidations of structurally diverse storage proteins and play distinct roles in PB development. PDIL2;3-dependent and PDIL2;3-independent oxidation pathways that sustain disulfide bonds of crP10 in PB-I.		PDIL2;3 and PDIL1;1 are not functionally redundant in sulfhydryl oxidations of structurally diverse storage proteins and play distinct roles in PB development. PDIL2;3-dependent and PDIL2;3-independent oxidation pathways that sustain disulfide bonds of crP10 in PB-I.

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 ==References==
-Please input cited references here.
 ==Structured Information==

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 ==Labs working on this gene==
-Please input related labs here.
 ==References==

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 ===Expression===
-Please input expression information here.
 ===Evolution===

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 ===Function===
-Complementation analyses using PDIL1;1 knockout esp2 mutant indicated that the a and a' TRX domains of PDIL1;1 exhibited similar redox activities and that PDIL2;3 was unable to perform the PDIL1;1 functions. PDIL2;3 knockdown inhibited the accumulation of Cys-rich 10-kD prolamin (crP10) in the core of PB-I. Conversely, crP10 knockdown dispersed PDIL2;3 into the ER lumen. Glutathione S-transferase-PDIL2;3 formed a stable tetramer when it was expressed in Escherichia coli, and the recombinant PDIL2;3 tetramer facilitated α-globulin(C79F) mutant protein to form nonnative intermolecular disulfide bonds in vitro. These results indicate that PDIL2;3 and PDIL1;1 are not functionally redundant in sulfhydryl oxidations of structurally diverse storage proteins and play distinct roles in PB development. We discuss PDIL2;3-dependent and PDIL2;3-independent oxidation pathways that sustain disulfide bonds of crP10 in PB-I.
+PDIL2;3 and PDIL1;1 are not functionally redundant in sulfhydryl oxidations of structurally diverse storage proteins and play distinct roles in PB development.  PDIL2;3-dependent and PDIL2;3-independent oxidation pathways that sustain disulfide bonds of crP10 in PB-I.
 ===Expression===

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 ==Structured Information==
 [[Category:Genes]]
 [[Category:Japonica mRNA]]

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 ===Evolution===
-You can also add sub-section(s) at will.
+Protein disulfide isomerase (PDI) family oxidoreductase PDIL2;3, an ortholog of human P5, contains a conserved structural disulfide in the redox-inactive thioredoxin-like (TRX) domain and was efficiently targeted to the surface of PB-I in a redox active site-dependent manner, whereas PDIL1;1, an ortholog of human PDI, was localized in the ER lumen.
 ==Labs working on this gene==

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 ==Annotated Information==
 ===Function===
-Please input function information here.
 ===Expression===

← Older revision		Revision as of 21:00, 22 July 2012
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		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os09g0451500\|		GeneName = Os09g0451500\|