Os09g0563300 - Revision history

Rice999: /* Annotated Information */

2016-10-12T09:27:34Z

‎Annotated Information

Rice999 at 09:26, 12 October 2016

2016-10-12T09:26:59Z

Rice999: /* Subcellular localization */

2016-10-12T09:24:51Z

‎Subcellular localization

Rice999: /* Evolution */

2016-10-12T09:24:36Z

‎Evolution

Rice999: /* Phenotypic analysis */

2016-10-12T09:23:10Z

‎Phenotypic analysis

Rice999: /* Function */

2016-10-12T09:22:58Z

‎Function

Rice999: /* Expression */

2016-10-12T09:21:17Z

‎Expression

Rice999 at 09:20, 12 October 2016

2016-10-12T09:20:43Z

192.168.72.52 at 13:33, 14 May 2015

2015-05-14T13:33:03Z

124.16.129.48 at 21:04, 22 July 2012

2012-07-22T21:04:01Z

@@ Line 2: / Line 2: @@
 ==Annotated Information==
-[[File:58-Os09g0563300.png|right|thumb|327px|'''Figure 6.''' ''Subcellular localization of pMON530-SPTCD9-GFP protein.<ref name="ref1" />.'']]
+[[File:58-Os09g0563300.png|right|thumb|427px|'''Figure 6.''' ''Subcellular localization of pMON530-SPTCD9-GFP protein.<ref name="ref1" />.'']]
 ===Gene Symbol===
 *'''''Os09g0563300''''' '''<=>''' '''''OsTCD9,TCD9'''''

@@ Line 2: / Line 2: @@
 ==Annotated Information==
 ===Gene Symbol===
 *'''''Os09g0563300''''' '''<=>''' '''''OsTCD9,TCD9'''''

@@ Line 17: / Line 17: @@
 ===Subcellular localization===
-* Subcellular localization analysis showed that the GFP fluorescence was colocalized with chlorophyll autofluorescence, showing that '''''TCD9''''' was a chloroplast-localized protein
+* Subcellular localization analysis showed that the GFP fluorescence was colocalized with chlorophyll autofluorescence, showing that '''''TCD9''''' was a chloroplast-localized protein.
 You can also add sub-section(s) at will.

@@ Line 16: / Line 16: @@
 * qRT-PCR analysis showed that '''''TCD9''''' exhibited the high expression in all tested tissues,especially in young leaves.
-===Evolution===
+===Subcellular localization===
-Please input evolution information here.
+* Subcellular localization analysis showed that the GFP fluorescence was colocalized with chlorophyll autofluorescence, showing that '''''TCD9''''' was a chloroplast-localized protein
 You can also add sub-section(s) at will.

@@ Line 10: / Line 10: @@
 ===Phenotypic analysis===
 * The leaves of tcd9 mutant appeared albino phenotype before the 3-leaf stage when grown below 24 ◦C, but the 4th leaves gradu- ally turned green and appeared normal green after the 5-leaf stage even at 20 ◦ C (Fig. 1A).
-* The color and height of tcd9 mutant was no discrepancy with wild type when grown beyond 28 ◦C (Fig. 1A). Similarly, the contents of Chl a, Chl b, total Chl and carotenoid (Car) in tcd9 plants before the 3-leaf stage at 20 ◦C were drastically lower than those in the wild type plants and itself grown beyond 28 ◦C(Suppl. Table S3); however, the contents were comparable between
+* The color and height of tcd9 mutant was no discrepancy with wild type when grown beyond 28 ◦C (Fig. 1A). Similarly, the contents of Chl a, Chl b, total Chl and carotenoid (Car) in tcd9 plants before the 3-leaf stage at 20 ◦C were drastically lower than those in the wild type plants and itself grown beyond 28 ◦C(Suppl. Table S3); however, the contents were comparable between wild type plants and tcd9 plant grown at 32 ◦ C (Fig. 1B).
 * The observations suggested the thermo-sensitivity of albino phenotype in the mutant as 7436S, Fan5, v1, v2 and v3

@@ Line 7: / Line 7: @@
 * '''''TCD9''''' encoding α-subunit of Cpn60 protein (Cpn60α),
 * '''''TCD9''''' plays a crucial role in chloroplast development at early leaf stage of rice.
 ===Expression===
 * qRT-PCR analysis showed that '''''TCD9''''' exhibited the high expression in all tested tissues,especially in young leaves.

@@ Line 1: / Line 1: @@
-Please input one-sentence summary here.
+The rice '''''Os09g0563300''''' was reported as '''''TCD9''''' in 2014 <ref name="ref1" /> by researchers from China.
 ==Annotated Information==
 ===Function===
-Please input function information here.
+* '''''TCD9''''' encoding α-subunit of Cpn60 protein (Cpn60α),
+* '''''TCD9''''' plays a crucial role in chloroplast development at early leaf stage of rice.
 ===Expression===
-Please input expression information here.
+'''''TCD9''''' exhibited the high expression in all tested tissues,especially in young leaves.
 ===Evolution===
@@ Line 14: / Line 16: @@
 ==Labs working on this gene==
-Please input related labs here.
+* Development Center of Plant Germplasm Resources, College of Life and Environment Sciences, Shanghai Normal University, Shanghai 200234, China
 ==References==
-Please input cited references here.
+<references>
 ==Structured Information==
 		 [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 9]]

← Older revision		Revision as of 13:33, 14 May 2015
Line 20:		Line 20:

	==Structured Information==		==Structured Information==
−	~~{{JaponicaGene\|~~	+	[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 9]]
−	~~GeneName = Os09g0563300\|~~
−	~~Description = Similar to RuBisCO subunit binding-protein alpha subunit, chloroplast precursor (60 kDa chaperonin alpha subunit) (CPN-60 alpha) (Fragment)\|~~
−	~~Version = NM_001189054.1 GI:297727238 GeneID:9268167\|~~
−	~~Length = 4066 bp\|~~
−	~~Definition = Oryza sativa Japonica Group Os09g0563300, complete gene.\|~~
−	~~Source = Oryza sativa Japonica Group~~
−
−	~~ORGANISM Oryza sativa Japonica Group~~
−	~~Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;~~
−	~~Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP~~
−	~~clade; Ehrhartoideae; Oryzeae; Oryza.~~
−	\|
−	~~Chromosome = [[:category:Japonica Chromosome 9\|Chromosome 9]]\|~~
−	~~AP = Chromosome 9:23214566..23218631\|~~
−	~~CDS = 23214801..23215011,23215325..23215446,23215529..23215810\|~~
−	~~GCID = <gbrowseImage1>~~
−	~~name=NC_008402:23214566..23218631~~
−	~~source=RiceChromosome09~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage1>\|~~
−	~~GSID = <gbrowseImage2>~~
−	~~name=NC_008402:23214566..23218631~~
−	~~source=RiceChromosome09~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage2>\|~~
−	CDNA = <cdnaseq>atgtctttgaccaccgtttctttctcataccccgccaagccgcttcccaaatggccgtgcacgctgcctaagccgccgccgagggctcgctgccgttttgtggtgcgggcggacgtcaaggtgatctcttccggtgaggcctgccgccgtgggctcgccgccggcatcgacaagctcgccgacgccgtcgcggtcactctaggccccaaaggcaggaatgttgttattgaccaagacgatgttcctaaagtaatcaatgatggtatcacaattgccaaggctatagagctcccaaatgctgttgagcacgcaggtgccatgttacttcaagagatagcatccaagacgaatagttctgttggcgatggaacaacaactgctattattttggcaagagaaattatcaatcttgggttgttggcagtagccactggtgctaacccagttgccctgagaaagggtattgacaaagctgttcatgaacttattgggatcttgaagactaaatgtatccctgtaagtacaaaggaggacataaaaggtaattttgtcacctgggaagcatacatcacgagcacagaaatacggaataataaaccatacccactagactag</cdnaseq>\|
−	AA = <aaseq>MSLTTVSFSYPAKPLPKWPCTLPKPPPRARCRFVVRADVKVISS GEACRRGLAAGIDKLADAVAVTLGPKGRNVVIDQDDVPKVINDGITIAKAIELPNAVE HAGAMLLQEIASKTNSSVGDGTTTAIILAREIINLGLLAVATGANPVALRKGIDKAVH ELIGILKTKCIPVSTKEDIKGNFVTWEAYITSTEIRNNKPYPLD</aaseq>\|
−	DNA = <dnaseqindica>236..446#760..881#964..1245#tttgtggagaaggagaaatgttgatttcttgagagttgagacgaggaagaagagcaagcggataaaccacctgtgctaaaaccctcatcgccgcgccgccgcctccgcctctgctccgccgctcccaaccctgcgcggcgggcggcggtgagccggtctgctcttccctctaccggccgcccacgctgctcctcacggcgctctcgattcctggttcctctccccgtgggcctccatgtctttgaccaccgtttctttctcataccccgccaagccgcttcccaaatggccgtgcacgctgcctaagccgccgccgagggctcgctgccgttttgtggtgcgggcggacgtcaaggtgatctcttccggtgaggcctgccgccgtgggctcgccgccggcatcgacaagctcgccgacgccgtcgcggtcactctaggccccaaaggtcagcctactgtttttttttggtgctcttgagtaccaattcttgctgtccaacttctaatttcttgcaatttcagtgcttatatggatgattcgatgtaagatatgaatctagtgaatgcacagaaaatgagccatcaggagcctaaaaggatttcaattttttttttcttgctaaagcctaaagatgttgggtttggtatatccatcagtttagtttgttgttcatgttgttgggttctcatgagcctggattacctgtttaattgtcttgtaatgctacggaatgttgagagctcaaaaatttactgcaggcaggaatgttgttattgaccaagacgatgttcctaaagtaatcaatgatggtatcacaattgccaaggctatagagctcccaaatgctgttgagcacgcaggtgccatgttacttcaagaggttgggtgccgaatgtcttcatattctttaaattggtcaatatcgacaccgctgtttattttactgatagcatgttaaccagatagcatccaagacgaatagttctgttggcgatggaacaacaactgctattattttggcaagagaaattatcaatcttgggttgttggcagtagccactggtgctaacccagttgccctgagaaagggtattgacaaagctgttcatgaacttattgggatcttgaagactaaatgtatccctgtaagtacaaaggaggacataaaaggtaattttgtcacctgggaagcatacatcacgagcacagaaatacggaataataaaccatacccactagactagtaacctttcctttttattttagaaagcatatagtcgatatagcatgaagcatatcatgatttgtctgtgaatgcaccgaaattattctgtggtcagattataaaatgttgtaaatctctaaatttcattttcagctgttgcttcaatatcagctggcaatgatgaatatgttggcgatctcattgctgatgcattggagaagataggtcctgatggaataattaaaattgagtcctcatcttcaatatatacttcagttgaggtgcaagaaggaatgaaggtatgtttatgtggatatgaaatttctccctacaatatgctacctgtatgcaaagaacttcccttttgcaacaaaatgcagctatgtctcagggtgtgtcaaacaaaatcattccattgaaccactaatcaacatttagtgcagaaagtagctggtgtaaatttatagtactatggttcatgattctccgtctggtcgttgcagatagacaaaggttatatctctccacatttcatcacaaatcaagacaaagcaattgttgaatttgaaaatgctagggtacttttaactgatcagcgggtggatgatgtccaagagatacttcctttgctagagaagaccacacagttgagtgtccctttgttgattattgcggaggatgtttcacatacggtgtattcaactcttgttcttaacaaactgaatggactgctaaatgttgctgttgttaaatgtcctggtttgggagatgaaaagaaggctattctccaagatattgctattatgacaggtgaagaattagtacactagaactatgtaccttgaaatttaatgttagaattattccatacatcaaagtacatgattttatcttgtagtacatgcttacaggatataggccatatcctaatagtcttttaaaacatatttagcagttccttagtatttgtcttgtcagatgacattatgctatttccctctaccgtgttgccgagaccagcattttcatatttggctttcaccatctttcatgtgcatggtgaattgctttaaacttatctgtctagctccgttaggctctgagtttttgtttctccttcaatttacaggtgcagatttctttgctagtgaccttggctggtgtcttcaaggtgctacttctgatcagctaggtatggctcagaagatcactataacaagtgatactactactatcattgcacatccttcgatgagaccagaaattgaggccagaattcagcaacttaagaaagatctagaggagacaacaagtgcctatctaaaagaaaggttttcatctcgtatcgctaaactctcaagaggtattgcagttatcaaggtgcgttgctatgacattatgtcaacaaacctatattcccattgtttaatgaatatgtgctttctgtatacaattttaccggaaagctttctttgtgtcaaaaagattttcaggacataatgcagaaatcactttagttgtggtataaaactgttagtttgtgtctggggatttgataagagtggacttttttcaggttggtgcagctactgaagctgaactcgaggataggaaactgagagcggaggatgcaaaaaatgcaacctttgcagccattagcgaaggcataactcctggaggtggtgtgacgtatgttcaattatcaaagtatattcccagtatcatggatcttgtagatgactctgaagagaagattggtgtaaatatagttgggaaggtttgtttctctattcactgacaaccatcactttttttttggcatatttgcattacactgctgctgctgtattacacacttggtttgtttctccattcactaacaaccatcacctttttttttcttttttttttcatattttcttacactgctgcagctgtattacacactaggtttgaagaataatctacattttgaacctaagcatcaaatactcaatatggcaaatatgtcaattcctttagtgactaacaagtgcaaagacgcatcaatttaaatttaaggcgttcactgtattaacacattctcagaagatattttttcttgcaaaaataattaaatcagttgcataacatcctaattctgaaatctgtccaatgaccaatgttgctctaggcacttctcgtccctgctatgacgatagctcgcaatgctggggcagatggtccagctgttgtagagaagcttcttgcgagtgaatggcgagttggatacaatgcaatgactgacaaatttgaagaccttgttgatgctggtgtggtagacccatgcagggttgcaagatgtgtgcttcaaaactctgcctctattgcaggacttattttaatgacgcaagctatgatgttcgacaaaataaagaagaaaaagtccaccattcctcaaattcctggcatcccaccattgcagataaatcaaaatgcttagatttgaactagtaacttactgtcattgaagaaaggtccatgatgcaaggcctttgtttgatcggttagatgagttgaaccaagaattggaagtggagcctctgagcagatcatcagctggagccactgggtacgataacggaggaaaagatctacttctatggttcagatatcagtaacttaaaactaactgtatactagtcagcaaaatgtctccatatccctcttctctcttttcccttggaggtgcaaggagcattttttttccttcacaattttgtaacgtagaagataggattactaatccattgcagatcccaaaatgttgaacgtgctagttttattgtacttttatatct</dnaseqindica>\|
−	~~Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001189054.1 RefSeq:Os09g0563300]\|~~
−	}}
−	[[Category:Genes]]
−	~~[[Category:Japonica mRNA]]~~
−	[[Category:Oryza Sativa Japonica Group]]
−	[[Category:Japonica ~~Genes]]~~
−	~~[[Category:Japonica Chromosome 9]]~~
−	~~[[Category:~~Chromosome 9]]

← Older revision		Revision as of 21:04, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os09g0563300\|		GeneName = Os09g0563300\|