Os10g0389200 - Revision history

Guangyi: /* Annotated Information */

2016-12-11T13:24:40Z

‎Annotated Information

Guangyi at 13:22, 11 December 2016

2016-12-11T13:22:00Z

192.168.72.52 at 12:42, 14 May 2015

2015-05-14T12:42:33Z

124.16.129.48 at 21:07, 22 July 2012

2012-07-22T21:07:54Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os10g0389200| Description = Similar to Red chlorophyll catabolite reductase [Oryza sativa (japonica cultivar-group)]| Version = NM_001071035.1 GI..."

2012-06-21T08:36:39Z

Created page with "{{JaponicaGene| GeneName = Os10g0389200| Description = Similar to Red chlorophyll catabolite reductase [Oryza sativa (japonica cultivar-group)]| Version = NM_001071035.1 GI..."

New page

{{JaponicaGene|
GeneName = Os10g0389200|
Description = Similar to Red chlorophyll catabolite reductase [Oryza sativa (japonica cultivar-group)]|
Version = NM_001071035.1 GI:115481813 GeneID:4348519|
Length = 1535 bp|
Definition = Oryza sativa Japonica Group Os10g0389200, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 10|Chromosome 10]]|
AP = Chromosome 10:13242540..13244074|
CDS = 13242540..13243157,13243895..13244074|
GCID = <gbrowseImage1>
name=NC_008403:13242540..13244074
source=RiceChromosome10
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008403:13242540..13244074
source=RiceChromosome10
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggtggaggtggcgcaccgggaggtggcgcgggcgctcgcgtccctggcggaggcgcggctgggcgcgcggctgctcccctccgccgtgccgcccgacgtcgccgagttccgcagcggcggcggcgccgggaacgccgtgggctcgctcgacgtgcgccgcggcgcgccgggatcgacgattgatttcatgctccagtcctcactacactgcaaagtcccaaatggcgcaatcgacattacatctcttctcatctttctgaacgcctcgacagatgctccgcatttcctcatggaatttatacaaggtagcccaacttcgatcgtggtgcttctggaccttctcccacggaaagaccttgcgctccatcccgaatacatagagagatactatgagaatactcaggtggacaaacagcgtgagaaggtcgaagaattgccgcaggcccgtccataccgatcgcgatccctcttcgtgcgcagcaccttctcactgacagcaatactgatgagcatcgactgtgggcaaggaggagagggtaccttggaagagatagtgcgtggtcaactagcaacagctgctagggcacttcttcaaatttggcttgatagttgtgctgatcatacttcagagatggaagaaggcgagagagaaaacatgataaagagggaccaaattgtaaggtccaagtcaatcgaggtcgacctgacttcaaatttgccgaggatgtttggtcccgatgtcgcagaccgagtcatagctgaaatccagaaggcctttggggtacaagaggcctag</cdnaseq>|
AA = <aaseq>MVEVAHREVARALASLAEARLGARLLPSAVPPDVAEFRSGGGAG NAVGSLDVRRGAPGSTIDFMLQSSLHCKVPNGAIDITSLLIFLNASTDAPHFLMEFIQ GSPTSIVVLLDLLPRKDLALHPEYIERYYENTQVDKQREKVEELPQARPYRSRSLFVR STFSLTAILMSIDCGQGGEGTLEEIVRGQLATAARALLQIWLDSCADHTSEMEEGERE NMIKRDQIVRSKSIEVDLTSNLPRMFGPDVADRVIAEIQKAFGVQEA</aaseq>|
DNA = <dnaseqindica>918..1535#1..180#atggtggaggtggcgcaccgggaggtggcgcgggcgctcgcgtccctggcggaggcgcggctgggcgcgcggctgctcccctccgccgtgccgcccgacgtcgccgagttccgcagcggcggcggcgccgggaacgccgtgggctcgctcgacgtgcgccgcggcgcgccgggatcgacggtaatggcacccctcctctcacttttgctcgtcagatcgtacagatttacctgttctgtcgattggagaacatcagaatcagtcatatgaattagtgaaatggtagtggtaaactggtaatgtctagagcaccatcagaatcagtcatatgaattaagtagtgaatcatatgaattaactaattaagtagtgaaatggtagtggtaaactggtaaaaacaggctggcacaaacagagcagaatagatcaatggcatgtcaaaagacttggacaatttactgaaactgttttacactgaaaaattgctgccgaactatttgtgatttgccctatcaaggtgaacttgcaaacttttagaagccaagatccataatccaactcttcggagcaaattatgacttttcattatattggcaatgctcaaattagttcatttgcttccaatatcgaaatggaaacaattggtctgttctagagtttgtacctcattcgtgattcttcctatcactcacagattttgtttcctctccaaaaacaaaaaaacaaaatcactccaactgaacggacacaattggagtggccaaaatgatcaacagcattcaaattatgaaactaatctcaccacttgaacacctgaattatgctccctagtgctcagtagcttagcgtggtagaatttcttgagttctgcaaggaatgacaaatggagttaaattattaatttttcttgtctacagattgatttcatgctccagtcctcactacactgcaaagtcccaaatggcgcaatcgacattacatctcttctcatctttctgaacgcctcgacagatgctccgcatttcctcatggaatttatacaaggtagcccaacttcgatcgtggtgcttctggaccttctcccacggaaagaccttgcgctccatcccgaatacatagagagatactatgagaatactcaggtggacaaacagcgtgagaaggtcgaagaattgccgcaggcccgtccataccgatcgcgatccctcttcgtgcgcagcaccttctcactgacagcaatactgatgagcatcgactgtgggcaaggaggagagggtaccttggaagagatagtgcgtggtcaactagcaacagctgctagggcacttcttcaaatttggcttgatagttgtgctgatcatacttcagagatggaagaaggcgagagagaaaacatgataaagagggaccaaattgtaaggtccaagtcaatcgaggtcgacctgacttcaaatttgccgaggatgtttggtcccgatgtcgcagaccgagtcatagctgaaatccagaaggcctttggggtacaagaggcctag</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001071035.1 RefSeq:Os10g0389200]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 10]]
[[Category:Chromosome 10]]

@@ Line 6: / Line 6: @@
 <br>
 ===Function===
-Please input function information here.
+*'''OsRCCR1''' play key roles in senescence and are involved in wound responses.
+<br>
 ===Expression===
-Please input expression information here.
+*Expression analysis by semi-quantitative PCR or quantitative real-time PCR showed that '''OsRCCR1''' transcripts were much more abundant than OsRCCR2, and all of these genes were upregulated during senescence and following wound treatment.
+<br>
-===Evolution===
+===Mutant===
-Please input evolution information here.
+*RNA interference knockdown of '''OsPAO''' led to pheophorbide a accumulation in leaves (especially dark-induced senescent leaves) and leaf death from regeneration stage onwards, even transgenic plants inviability after transplantation. While, knockdown of OsRCCR1 resulted in lesionmimic spots generation in older leaves which died off early in the transgenic plants.
+<br>
 ==Labs working on this gene==

@@ Line 1: / Line 1: @@
-Please input one-sentence summary here.
+The rice '''Os10g0389200''' was reported as '''	OsRCCR1''' in 2011 <ref name="ref1" /> by researchers from the China.
+<br>
 ==Annotated Information==
 ===Function===
 Please input function information here.
@@ Line 14: / Line 17: @@
 ==Labs working on this gene==
-Please input related labs here.
+*Key Laboratory of Plant Resources Conservation and Sustainable Utilization, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou 510650, PR China
+*Graduate University of the Chinese Academy of Sciences, Beijing 100049, PR China
 ==References==
-Please input cited references here.
+<references>
 ==Structured Information==
 		 [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 10]]

← Older revision		Revision as of 12:42, 14 May 2015
Line 20:		Line 20:

	==Structured Information==		==Structured Information==
−	~~{{JaponicaGene\|~~	+	[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 10]]
−	~~GeneName = Os10g0389200\|~~
−	~~Description = Similar to Red chlorophyll catabolite reductase [Oryza sativa (japonica cultivar-group)]\|~~
−	~~Version = NM_001071035.1 GI:115481813 GeneID:4348519\|~~
−	~~Length = 1535 bp\|~~
−	~~Definition = Oryza sativa Japonica Group Os10g0389200, complete gene.\|~~
−	~~Source = Oryza sativa Japonica Group~~
−
−	~~ORGANISM Oryza sativa Japonica Group~~
−	~~Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;~~
−	~~Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP~~
−	~~clade; Ehrhartoideae; Oryzeae; Oryza.~~
−	\|
−	~~Chromosome = [[:category:Japonica Chromosome 10\|Chromosome 10]]\|~~
−	~~AP = Chromosome 10:13242540..13244074\|~~
−	~~CDS = 13242540..13243157,13243895..13244074\|~~
−	~~GCID = <gbrowseImage1>~~
−	~~name=NC_008403:13242540..13244074~~
−	~~source=RiceChromosome10~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage1>\|~~
−	~~GSID = <gbrowseImage2>~~
−	~~name=NC_008403:13242540..13244074~~
−	~~source=RiceChromosome10~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage2>\|~~
−	CDNA = <cdnaseq>atggtggaggtggcgcaccgggaggtggcgcgggcgctcgcgtccctggcggaggcgcggctgggcgcgcggctgctcccctccgccgtgccgcccgacgtcgccgagttccgcagcggcggcggcgccgggaacgccgtgggctcgctcgacgtgcgccgcggcgcgccgggatcgacgattgatttcatgctccagtcctcactacactgcaaagtcccaaatggcgcaatcgacattacatctcttctcatctttctgaacgcctcgacagatgctccgcatttcctcatggaatttatacaaggtagcccaacttcgatcgtggtgcttctggaccttctcccacggaaagaccttgcgctccatcccgaatacatagagagatactatgagaatactcaggtggacaaacagcgtgagaaggtcgaagaattgccgcaggcccgtccataccgatcgcgatccctcttcgtgcgcagcaccttctcactgacagcaatactgatgagcatcgactgtgggcaaggaggagagggtaccttggaagagatagtgcgtggtcaactagcaacagctgctagggcacttcttcaaatttggcttgatagttgtgctgatcatacttcagagatggaagaaggcgagagagaaaacatgataaagagggaccaaattgtaaggtccaagtcaatcgaggtcgacctgacttcaaatttgccgaggatgtttggtcccgatgtcgcagaccgagtcatagctgaaatccagaaggcctttggggtacaagaggcctag</cdnaseq>\|
−	AA = <aaseq>MVEVAHREVARALASLAEARLGARLLPSAVPPDVAEFRSGGGAG NAVGSLDVRRGAPGSTIDFMLQSSLHCKVPNGAIDITSLLIFLNASTDAPHFLMEFIQ GSPTSIVVLLDLLPRKDLALHPEYIERYYENTQVDKQREKVEELPQARPYRSRSLFVR STFSLTAILMSIDCGQGGEGTLEEIVRGQLATAARALLQIWLDSCADHTSEMEEGERE NMIKRDQIVRSKSIEVDLTSNLPRMFGPDVADRVIAEIQKAFGVQEA</aaseq>\|
−	DNA = <dnaseqindica>918..1535#1..180#atggtggaggtggcgcaccgggaggtggcgcgggcgctcgcgtccctggcggaggcgcggctgggcgcgcggctgctcccctccgccgtgccgcccgacgtcgccgagttccgcagcggcggcggcgccgggaacgccgtgggctcgctcgacgtgcgccgcggcgcgccgggatcgacggtaatggcacccctcctctcacttttgctcgtcagatcgtacagatttacctgttctgtcgattggagaacatcagaatcagtcatatgaattagtgaaatggtagtggtaaactggtaatgtctagagcaccatcagaatcagtcatatgaattaagtagtgaatcatatgaattaactaattaagtagtgaaatggtagtggtaaactggtaaaaacaggctggcacaaacagagcagaatagatcaatggcatgtcaaaagacttggacaatttactgaaactgttttacactgaaaaattgctgccgaactatttgtgatttgccctatcaaggtgaacttgcaaacttttagaagccaagatccataatccaactcttcggagcaaattatgacttttcattatattggcaatgctcaaattagttcatttgcttccaatatcgaaatggaaacaattggtctgttctagagtttgtacctcattcgtgattcttcctatcactcacagattttgtttcctctccaaaaacaaaaaaacaaaatcactccaactgaacggacacaattggagtggccaaaatgatcaacagcattcaaattatgaaactaatctcaccacttgaacacctgaattatgctccctagtgctcagtagcttagcgtggtagaatttcttgagttctgcaaggaatgacaaatggagttaaattattaatttttcttgtctacagattgatttcatgctccagtcctcactacactgcaaagtcccaaatggcgcaatcgacattacatctcttctcatctttctgaacgcctcgacagatgctccgcatttcctcatggaatttatacaaggtagcccaacttcgatcgtggtgcttctggaccttctcccacggaaagaccttgcgctccatcccgaatacatagagagatactatgagaatactcaggtggacaaacagcgtgagaaggtcgaagaattgccgcaggcccgtccataccgatcgcgatccctcttcgtgcgcagcaccttctcactgacagcaatactgatgagcatcgactgtgggcaaggaggagagggtaccttggaagagatagtgcgtggtcaactagcaacagctgctagggcacttcttcaaatttggcttgatagttgtgctgatcatacttcagagatggaagaaggcgagagagaaaacatgataaagagggaccaaattgtaaggtccaagtcaatcgaggtcgacctgacttcaaatttgccgaggatgtttggtcccgatgtcgcagaccgagtcatagctgaaatccagaaggcctttggggtacaagaggcctag</dnaseqindica>\|
−	~~Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001071035.1 RefSeq:Os10g0389200]\|~~
−	}}
−	[[Category:Genes]]
−	~~[[Category:Japonica mRNA]]~~
−	[[Category:Oryza Sativa Japonica Group]]
−	[[Category:Japonica ~~Genes]]~~
−	~~[[Category:Japonica Chromosome 10]]~~
−	~~[[Category:~~Chromosome 10]]

← Older revision		Revision as of 21:07, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os10g0389200\|		GeneName = Os10g0389200\|