Os10g0499500 - Revision history

Xysj2017: /* Labs working on this gene */

2017-02-14T14:38:25Z

‎Labs working on this gene

Liman at 02:21, 22 December 2016

2016-12-22T02:21:13Z

Liman at 02:14, 22 December 2016

2016-12-22T02:14:41Z

Liman at 09:22, 10 December 2016

2016-12-10T09:22:41Z

192.168.72.52 at 12:48, 14 May 2015

2015-05-14T12:48:01Z

124.16.129.48 at 21:11, 22 July 2012

2012-07-22T21:11:03Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os10g0499500| Description = Similar to Fertility restorer| Version = NM_001071510.1 GI:115482763 GeneID:4349026| Length = 2497 bp| Definition =..."

2012-06-21T08:43:58Z

Created page with "{{JaponicaGene| GeneName = Os10g0499500| Description = Similar to Fertility restorer| Version = NM_001071510.1 GI:115482763 GeneID:4349026| Length = 2497 bp| Definition =..."

New page

{{JaponicaGene|
GeneName = Os10g0499500|
Description = Similar to Fertility restorer|
Version = NM_001071510.1 GI:115482763 GeneID:4349026|
Length = 2497 bp|
Definition = Oryza sativa Japonica Group Os10g0499500, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 10|Chromosome 10]]|
AP = Chromosome 10:19514088..19516584|
CDS = 19514342..19515862|
GCID = <gbrowseImage1>
name=NC_008403:19514088..19516584
source=RiceChromosome10
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008403:19514088..19516584
source=RiceChromosome10
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggcacgccgcgtcgctgcccgcgcccgcgcccgcgccggcggcgtcccgcgctcggagggtacgatccaagaccgagcacgcgttgggagcggtggcgccgaggacgcactcgacgtgttcgacgaattgctccggcgaggcatcggcgctccgatccgcagcttgaacggcgctctcgccgacgtcgcgcgcgacaaccccgcggccgctgtgtcccgcttcaaccgcatggcacgagctggtgccagcatggtaactcccaccgtgcacacctatggcatcctcatcggctgctgctgcagtgcgggccgcttagacctcggtttcgcggccttgggccatgtcgttaagaagggattcagagtggaacccatcatctttaatcctctgctcaagggcctctgtgcagacaagaggacggacgacgcaatggacatagtgctccgtggaatgaccgagctcagctgcgtgccaaatgtcttctcccacaccattattctcaagggactctgtcatgagaacagaagccaagaagctctcgagctgctccacatgatggctgatgatggaggaggctgcttacctaatgttgtgtcatacagcaccgtcatcgatggcctcttgaaaggaggggatccggacaaagcctacgctacataccgtgaaatgcttgaccggaggattttgccaaatgttgtgatttacagctccattattgctgccctatgcaagggtcaagcaatggacaaggccatggaggtacacgataggatggttaagaatggagttacacccaattgcttcacgtatactagtcttgtgcatggattttgctcttcagggcagttgacagaggctattaaatttctagaaaagatgtgcagcaatggtgttgaaccaaatgttgttacttatagctcgtttatggactatctctgcaagaacggaagatgcacagaagctagaaagatttttgattctatggtcaagaggggcctaaagcctgatattactacctacagtagcttacttcatgggtatgctatcgaaggagctcttgttgagatgcatggtctctttgatttgatggtacaaagtgatatgcaacccgatcattatgtcttcaacacactaatatatgcatccgccaagcaaggaaaagtagatgaggccatgcttgtatttagcaaaatgaggcagcaaggattgaaacctaattgtgttacgtatagcactttgattaatggctactgtaaaattactaggatggagaatgctttagcacttttccaagagatggtgagcaatggtgttagtcctaattttatcacatataacataatgctgcaaggtttatttcgtacaggaagaactgctactgcaaaagaattctatgtacagattatcaaaagtggcaaaaaagatcttatagaacaggggttgctagaagaattggatgatctatttctttcaatggaggacaatgactgtagtactgtgtcgactcctgcatgctaa</cdnaseq>|
AA = <aaseq>MARRVAARARARAGGVPRSEGTIQDRARVGSGGAEDALDVFDEL LRRGIGAPIRSLNGALADVARDNPAAAVSRFNRMARAGASMVTPTVHTYGILIGCCCS AGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLRGMTELSCVPN VFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGLLKGGDPDKAY ATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVH GFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGL KPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEA MLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIML QGLFRTGRTATAKEFYVQIIKSGKKDLIEQGLLEELDDLFLSMEDNDCSTVSTPAC</aaseq>|
DNA = <dnaseqindica>255..1775#gtcgtcttcttcccgcgcctttcgcgaagccaactgctcgaacggacgcacccgtgcagccgcgctcgtcggccgtcgccgtcgaggccgcccctccgccgccgccagcagctgatccgttcgccattccttcgcgcgctggttagttccaccttcctttgcctctggttcctagtttcctagtaaaccacggggtgatttattcagcgctgccgcaggtttccacctttccttgcccgtccgtcaggccggacatggcacgccgcgtcgctgcccgcgcccgcgcccgcgccggcggcgtcccgcgctcggagggtacgatccaagaccgagcacgcgttgggagcggtggcgccgaggacgcactcgacgtgttcgacgaattgctccggcgaggcatcggcgctccgatccgcagcttgaacggcgctctcgccgacgtcgcgcgcgacaaccccgcggccgctgtgtcccgcttcaaccgcatggcacgagctggtgccagcatggtaactcccaccgtgcacacctatggcatcctcatcggctgctgctgcagtgcgggccgcttagacctcggtttcgcggccttgggccatgtcgttaagaagggattcagagtggaacccatcatctttaatcctctgctcaagggcctctgtgcagacaagaggacggacgacgcaatggacatagtgctccgtggaatgaccgagctcagctgcgtgccaaatgtcttctcccacaccattattctcaagggactctgtcatgagaacagaagccaagaagctctcgagctgctccacatgatggctgatgatggaggaggctgcttacctaatgttgtgtcatacagcaccgtcatcgatggcctcttgaaaggaggggatccggacaaagcctacgctacataccgtgaaatgcttgaccggaggattttgccaaatgttgtgatttacagctccattattgctgccctatgcaagggtcaagcaatggacaaggccatggaggtacacgataggatggttaagaatggagttacacccaattgcttcacgtatactagtcttgtgcatggattttgctcttcagggcagttgacagaggctattaaatttctagaaaagatgtgcagcaatggtgttgaaccaaatgttgttacttatagctcgtttatggactatctctgcaagaacggaagatgcacagaagctagaaagatttttgattctatggtcaagaggggcctaaagcctgatattactacctacagtagcttacttcatgggtatgctatcgaaggagctcttgttgagatgcatggtctctttgatttgatggtacaaagtgatatgcaacccgatcattatgtcttcaacacactaatatatgcatccgccaagcaaggaaaagtagatgaggccatgcttgtatttagcaaaatgaggcagcaaggattgaaacctaattgtgttacgtatagcactttgattaatggctactgtaaaattactaggatggagaatgctttagcacttttccaagagatggtgagcaatggtgttagtcctaattttatcacatataacataatgctgcaaggtttatttcgtacaggaagaactgctactgcaaaagaattctatgtacagattatcaaaagtggcaaaaaagatcttatagaacaggggttgctagaagaattggatgatctatttctttcaatggaggacaatgactgtagtactgtgtcgactcctgcatgctaaattgcagagttacaaagttacttcaaaaaggggaagtaggcactaggcagtgctggggtttacatgtccaaaattgatcaaaataacctccccgttgaagcttcgactgttgatttgctgattttgctgatttcaagcaggaaattcaatcaaacatacggaatttctccctgaaaagttttgctctgaagtgaaatccatcctgtttgaaatggcctacagttatgcagttgtaactggctattgttggccttctcactgaattagtaatacaaacaagaaattctggaccactctatgtttggggatcacctttatctgttacatgtggattgctaggtacaaactgcccttttttttgtcacactatatctgattcccttcgaagaaaaattcccagatgatattatagttctctaattttgctactttttgtagctttgttagaactaatttattatctgctaaacttgcagtgacaaagattcccctgtatgataaatagcatagttagcagactgtttcacagaggtgcactaagcagagctggtgcttacctctccatgactgatgataagcacttctctctcaaagcatggtctgtttccctgttttatagatctttttttctggaggcaaacaccaagaatatcataggttttcccctgaaaagtacaagtatttatagaatattggaaccgctgaagatttttgcagctacg</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001071510.1 RefSeq:Os10g0499500]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 10]]
[[Category:Chromosome 10]]

@@ Line 14: / Line 14: @@
 You can also add sub-section(s) at will.
 ==Labs working on this gene==
-* Key Laboratory of Plant Functional Genomics and Biotechnology of Guangdong Province, College of Life Sciences,
+* Key Laboratory of Plant Functional Genomics and Biotechnology of Guangdong Province, College of Life Sciences, South China Agricultural University, Guangzhou 510642, China
 * Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, Shanghai 200032, China
 * School of Life Science and Biotechnology, Shanghai Jiao Tong University, Shanghai 200030, China
 * School of Life Sciences, Fudan University, Shanghai 200433, China
 ==References==
 <references>

@@ Line 1: / Line 1: @@
-The rice gene Os10g0499500 was reported as '''''RF1b''''' in 20<ref name="ref1" /> by researchers from China and Japan.
+The rice gene Os10g0499500 was reported as '''''RF1b''''' in 2006<ref name="ref1" /> by researchers from China.
 ==Annotated Information==
 ===Gene Symbol===
@@ Line 6: / Line 5: @@
 ===Function===
-[[File:.png|right|thumb|400px|'''''' '' <ref name="ref1" />.'']]
+* Two fertility restorer genes, '''''Rf1a''''' and '''''Rf1b''''', were identified at the classical locus Rf-1 as members of a multigene cluster that encode pentatricopeptide repeat proteins. '''''RF1A''''' and '''''RF1B''''' are both targeted to mitochondria and can restore male fertility by blocking ORF79 production via endonucleolytic cleavage (RF1A) or degradation (RF1B) of dicistronic B-atp6/orf79 mRNA.
-===Mutation===
+* '''''Rf1a''''' and '''''Rf1b''''' function independently to restore male fertility by silencing the CMS gene via different RNA processing pathways.
 ===Expression ===
 ===Evolution===

@@ Line 1: / Line 1: @@
-The rice gene  was reported as '''''''''' in 20<ref name="ref1" /> by researchers from China and Japan.
+The rice gene Os10g0499500 was reported as '''''RF1b''''' in 20<ref name="ref1" /> by researchers from China and Japan.
 ==Annotated Information==
 ===Gene Symbol===
-*''''' <=>
+*'''''Os10g0499500 <=> RF1b, Rf-1B, PPR7
 ===Function===
@@ Line 19: / Line 19: @@
 You can also add sub-section(s) at will.
 ==Labs working on this gene==
+* Key Laboratory of Plant Functional Genomics and Biotechnology of Guangdong Province, College of Life Sciences,
 ==References==
 <references>
 * <ref name="ref1">
+Wang Z, Zou Y, Li X, et al. Cytoplasmic male sterility of rice with boro II cytoplasm is caused by a cytotoxic peptide and is restored by two related PPR motif genes via distinct modes of mRNA silencing[J]. The Plant Cell, 2006, 18(3): 676-687.
 </ref>
 </references>

@@ Line 1: / Line 1: @@
-Please input one-sentence summary here.
+The rice gene  was reported as '''''''''' in 20<ref name="ref1" /> by researchers from China and Japan.
 ==Annotated Information==
 ===Function===
-Please input function information here.
+[[File:.png|right|thumb|400px|'''''' '' <ref name="ref1" />.'']]
 ===Evolution===
 You can also add sub-section(s) at will.
 ==Labs working on this gene==
 ==References==
-Please input cited references here.
+<references>
 ==Structured Information==
 		 [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 10]]

← Older revision		Revision as of 12:48, 14 May 2015
Line 20:		Line 20:

	==Structured Information==		==Structured Information==
−	~~{{JaponicaGene\|~~	+	[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 10]]
−	~~GeneName = Os10g0499500\|~~
−	~~Description = Similar to Fertility restorer\|~~
−	~~Version = NM_001071510.1 GI:115482763 GeneID:4349026\|~~
−	~~Length = 2497 bp\|~~
−	~~Definition = Oryza sativa Japonica Group Os10g0499500, complete gene.\|~~
−	~~Source = Oryza sativa Japonica Group~~
−
−	~~ORGANISM Oryza sativa Japonica Group~~
−	~~Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;~~
−	~~Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP~~
−	~~clade; Ehrhartoideae; Oryzeae; Oryza.~~
−	\|
−	~~Chromosome = [[:category:Japonica Chromosome 10\|Chromosome 10]]\|~~
−	~~AP = Chromosome 10:19514088..19516584\|~~
−	~~CDS = 19514342..19515862\|~~
−	~~GCID = <gbrowseImage1>~~
−	~~name=NC_008403:19514088..19516584~~
−	~~source=RiceChromosome10~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage1>\|~~
−	~~GSID = <gbrowseImage2>~~
−	~~name=NC_008403:19514088..19516584~~
−	~~source=RiceChromosome10~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage2>\|~~
−	CDNA = <cdnaseq>atggcacgccgcgtcgctgcccgcgcccgcgcccgcgccggcggcgtcccgcgctcggagggtacgatccaagaccgagcacgcgttgggagcggtggcgccgaggacgcactcgacgtgttcgacgaattgctccggcgaggcatcggcgctccgatccgcagcttgaacggcgctctcgccgacgtcgcgcgcgacaaccccgcggccgctgtgtcccgcttcaaccgcatggcacgagctggtgccagcatggtaactcccaccgtgcacacctatggcatcctcatcggctgctgctgcagtgcgggccgcttagacctcggtttcgcggccttgggccatgtcgttaagaagggattcagagtggaacccatcatctttaatcctctgctcaagggcctctgtgcagacaagaggacggacgacgcaatggacatagtgctccgtggaatgaccgagctcagctgcgtgccaaatgtcttctcccacaccattattctcaagggactctgtcatgagaacagaagccaagaagctctcgagctgctccacatgatggctgatgatggaggaggctgcttacctaatgttgtgtcatacagcaccgtcatcgatggcctcttgaaaggaggggatccggacaaagcctacgctacataccgtgaaatgcttgaccggaggattttgccaaatgttgtgatttacagctccattattgctgccctatgcaagggtcaagcaatggacaaggccatggaggtacacgataggatggttaagaatggagttacacccaattgcttcacgtatactagtcttgtgcatggattttgctcttcagggcagttgacagaggctattaaatttctagaaaagatgtgcagcaatggtgttgaaccaaatgttgttacttatagctcgtttatggactatctctgcaagaacggaagatgcacagaagctagaaagatttttgattctatggtcaagaggggcctaaagcctgatattactacctacagtagcttacttcatgggtatgctatcgaaggagctcttgttgagatgcatggtctctttgatttgatggtacaaagtgatatgcaacccgatcattatgtcttcaacacactaatatatgcatccgccaagcaaggaaaagtagatgaggccatgcttgtatttagcaaaatgaggcagcaaggattgaaacctaattgtgttacgtatagcactttgattaatggctactgtaaaattactaggatggagaatgctttagcacttttccaagagatggtgagcaatggtgttagtcctaattttatcacatataacataatgctgcaaggtttatttcgtacaggaagaactgctactgcaaaagaattctatgtacagattatcaaaagtggcaaaaaagatcttatagaacaggggttgctagaagaattggatgatctatttctttcaatggaggacaatgactgtagtactgtgtcgactcctgcatgctaa</cdnaseq>\|
−	AA = <aaseq>MARRVAARARARAGGVPRSEGTIQDRARVGSGGAEDALDVFDEL LRRGIGAPIRSLNGALADVARDNPAAAVSRFNRMARAGASMVTPTVHTYGILIGCCCS AGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLRGMTELSCVPN VFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGLLKGGDPDKAY ATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVH GFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGL KPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEA MLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIML QGLFRTGRTATAKEFYVQIIKSGKKDLIEQGLLEELDDLFLSMEDNDCSTVSTPAC</aaseq>\|
−	DNA = <dnaseqindica>255..1775#gtcgtcttcttcccgcgcctttcgcgaagccaactgctcgaacggacgcacccgtgcagccgcgctcgtcggccgtcgccgtcgaggccgcccctccgccgccgccagcagctgatccgttcgccattccttcgcgcgctggttagttccaccttcctttgcctctggttcctagtttcctagtaaaccacggggtgatttattcagcgctgccgcaggtttccacctttccttgcccgtccgtcaggccggacatggcacgccgcgtcgctgcccgcgcccgcgcccgcgccggcggcgtcccgcgctcggagggtacgatccaagaccgagcacgcgttgggagcggtggcgccgaggacgcactcgacgtgttcgacgaattgctccggcgaggcatcggcgctccgatccgcagcttgaacggcgctctcgccgacgtcgcgcgcgacaaccccgcggccgctgtgtcccgcttcaaccgcatggcacgagctggtgccagcatggtaactcccaccgtgcacacctatggcatcctcatcggctgctgctgcagtgcgggccgcttagacctcggtttcgcggccttgggccatgtcgttaagaagggattcagagtggaacccatcatctttaatcctctgctcaagggcctctgtgcagacaagaggacggacgacgcaatggacatagtgctccgtggaatgaccgagctcagctgcgtgccaaatgtcttctcccacaccattattctcaagggactctgtcatgagaacagaagccaagaagctctcgagctgctccacatgatggctgatgatggaggaggctgcttacctaatgttgtgtcatacagcaccgtcatcgatggcctcttgaaaggaggggatccggacaaagcctacgctacataccgtgaaatgcttgaccggaggattttgccaaatgttgtgatttacagctccattattgctgccctatgcaagggtcaagcaatggacaaggccatggaggtacacgataggatggttaagaatggagttacacccaattgcttcacgtatactagtcttgtgcatggattttgctcttcagggcagttgacagaggctattaaatttctagaaaagatgtgcagcaatggtgttgaaccaaatgttgttacttatagctcgtttatggactatctctgcaagaacggaagatgcacagaagctagaaagatttttgattctatggtcaagaggggcctaaagcctgatattactacctacagtagcttacttcatgggtatgctatcgaaggagctcttgttgagatgcatggtctctttgatttgatggtacaaagtgatatgcaacccgatcattatgtcttcaacacactaatatatgcatccgccaagcaaggaaaagtagatgaggccatgcttgtatttagcaaaatgaggcagcaaggattgaaacctaattgtgttacgtatagcactttgattaatggctactgtaaaattactaggatggagaatgctttagcacttttccaagagatggtgagcaatggtgttagtcctaattttatcacatataacataatgctgcaaggtttatttcgtacaggaagaactgctactgcaaaagaattctatgtacagattatcaaaagtggcaaaaaagatcttatagaacaggggttgctagaagaattggatgatctatttctttcaatggaggacaatgactgtagtactgtgtcgactcctgcatgctaaattgcagagttacaaagttacttcaaaaaggggaagtaggcactaggcagtgctggggtttacatgtccaaaattgatcaaaataacctccccgttgaagcttcgactgttgatttgctgattttgctgatttcaagcaggaaattcaatcaaacatacggaatttctccctgaaaagttttgctctgaagtgaaatccatcctgtttgaaatggcctacagttatgcagttgtaactggctattgttggccttctcactgaattagtaatacaaacaagaaattctggaccactctatgtttggggatcacctttatctgttacatgtggattgctaggtacaaactgcccttttttttgtcacactatatctgattcccttcgaagaaaaattcccagatgatattatagttctctaattttgctactttttgtagctttgttagaactaatttattatctgctaaacttgcagtgacaaagattcccctgtatgataaatagcatagttagcagactgtttcacagaggtgcactaagcagagctggtgcttacctctccatgactgatgataagcacttctctctcaaagcatggtctgtttccctgttttatagatctttttttctggaggcaaacaccaagaatatcataggttttcccctgaaaagtacaagtatttatagaatattggaaccgctgaagatttttgcagctacg</dnaseqindica>\|
−	~~Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001071510.1 RefSeq:Os10g0499500]\|~~
−	}}
−	[[Category:Genes]]
−	~~[[Category:Japonica mRNA]]~~
−	[[Category:Oryza Sativa Japonica Group]]
−	[[Category:Japonica ~~Genes]]~~
−	~~[[Category:Japonica Chromosome 10]]~~
−	~~[[Category:~~Chromosome 10]]

← Older revision		Revision as of 21:11, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os10g0499500\|		GeneName = Os10g0499500\|