Os11g0592100 - Revision history

Xysj2017 at 02:05, 15 February 2017

2017-02-15T02:05:04Z

Xysj2017: /* Expression */

2017-02-15T01:56:56Z

‎Expression

Xysj2017 at 01:56, 15 February 2017

2017-02-15T01:56:44Z

Xysj2017 at 01:36, 15 February 2017

2017-02-15T01:36:01Z

Xysj2017 at 01:25, 15 February 2017

2017-02-15T01:25:50Z

Xysj2017 at 01:25, 15 February 2017

2017-02-15T01:25:25Z

192.168.72.52 at 13:58, 14 May 2015

2015-05-14T13:58:03Z

124.16.129.48 at 21:22, 22 July 2012

2012-07-22T21:22:03Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os11g0592100| Description = Similar to Barwin| Version = NM_001074721.1 GI:115486090 GeneID:4350822| Length = 1420 bp| Definition = Oryza sativ..."

2012-06-21T09:15:19Z

Created page with "{{JaponicaGene| GeneName = Os11g0592100| Description = Similar to Barwin| Version = NM_001074721.1 GI:115486090 GeneID:4350822| Length = 1420 bp| Definition = Oryza sativ..."

New page

{{JaponicaGene|
GeneName = Os11g0592100|
Description = Similar to Barwin|
Version = NM_001074721.1 GI:115486090 GeneID:4350822|
Length = 1420 bp|
Definition = Oryza sativa Japonica Group Os11g0592100, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 11|Chromosome 11]]|
AP = Chromosome 11:24348533..24349952|
CDS = 24348596..24348877,24349568..24349744|
GCID = <gbrowseImage1>
name=NC_008404:24348533..24349952
source=RiceChromosome11
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008404:24348533..24349952
source=RiceChromosome11
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atgatggtcatggcgatgatgagaagggtggtgatggtggtggcggtgctgtgtgcggtagcaactatggccatggcacaagaggcgtccaacgtgcgtgccacgtaccactactaccgtccggcggaaaacaattgggatttgggggccccggccgttagcgcgtactgtgccacgtgggatgctgacaagccgcttgaatggcgccagaagtatggatggaccgccttctgtgggcccgttggtcccactggtcaggatgcatgtggcaaatgtctctcggtgacgaacacggcgacaggggatcagatcacggcgaggatcgtggaccagtgcgccaatggggggctggatttagactgggacaccgtcttctccaagatcgacagcgacggtcaaggctaccagaatggccacctcatcgtcgactaccagttcgtcgactgcggcgataactag</cdnaseq>|
AA = <aaseq>MMVMAMMRRVVMVVAVLCAVATMAMAQEASNVRATYHYYRPAEN NWDLGAPAVSAYCATWDADKPLEWRQKYGWTAFCGPVGPTGQDACGKCLSVTNTATGD QITARIVDQCANGGLDLDWDTVFSKIDSDGQGYQNGHLIVDYQFVDCGDN</aaseq>|
DNA = <dnaseqindica>64..345#1036..1212#atttcactagcatctagcaagtgcacaacacatctataaatcgtagtaaccaccttaggtgagatgatggtcatggcgatgatgagaagggtggtgatggtggtggcggtgctgtgtgcggtagcaactatggccatggcacaagaggcgtccaacgtgcgtgccacgtaccactactaccgtccggcggaaaacaattgggatttgggggccccggccgttagcgcgtactgtgccacgtgggatgctgacaagccgcttgaatggcgccagaagtatggatggaccgccttctgtgggcccgttggtcccactggtcaggatgcatgtggcaaatgtctctcggtaagaatgttttttttctttcttgcgttgagaaatgtaatacatattagatatcgagacaagcttataactttgaccattgtttttttttaaagtatatcactacaaaattagcaccttatgaaagtattttcaaataaaacttatgatgataaaatccaacttgtaaaactagttttacgatataatctacttagtatccccctcttacataacttacaccgattttaactacacgtcgtttcttaaaagatatttgctctggtccaacaaaaagtatttcaagataccagtatctcatggtaccaagatccaacgatcggaaacgatttggtaccatgaggtaccggtacctcgaggtacttttcgttggaccgtagcaaatctcttcttaaaaatctataaaaaaaattaaacgatatcgtattatcaaattaatttgcatgcaagtataattatactactcgcattcataaaaatatataatttaaaagttgtattggttaaaagtaaaatcacattggtcaatgaccaatgatgtcaagtaaaagggaaggctgagggtacaatcgaagggagtaattaaatgatgatatataacaaacttatctgtgacaggagagagtaaacaataaaattacacatgatcccccaagatatatgaccatggagtgtgtgtaatatttgcaggtgacgaacacggcgacaggggatcagatcacggcgaggatcgtggaccagtgcgccaatggggggctggatttagactgggacaccgtcttctccaagatcgacagcgacggtcaaggctaccagaatggccacctcatcgtcgactaccagttcgtcgactgcggcgataactagcagctaattaaccactcttataaacttccctacatatatatacacatttcggacagaggagtaattaatatatctctgcctgatgaatgaataaagtggctggtgaataattgtgatgctaggctgctgtagatcgatccgtttacacatgctcgaagtatcaataaaattgtgtggaaatgtgatggatttctgtggctaaaagcct</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001074721.1 RefSeq:Os11g0592100]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 11]]
[[Category:Chromosome 11]]

@@ Line 3: / Line 3: @@
 ==Annotated Information==
 ===Gene Symbol===
-* '''''Os11g0592200''''' '''<=>''' '''''OsPR4,OsPR4a,PR4a,OsPR-4'''''
+* '''''Os11g0592200''''' '''<=>''' '''''OsPR4b,PR4B'''''
 ===Function===
 * '''''PR4''''' proteins constitute a pathogenesis-related (PR) protein family with a conserved BARWIN domain.

@@ Line 15: / Line 15: @@
 * Their expression levels were strongly induced by at least one of the stress treatments including drought, salt, cold, wounding, heat shock, and ultraviolet.
 * The transcript levels of OsPR4 genes were also induced by some phytohormones such as abscisic acid and jasmonic acid.
+<br>
 [[File:232-Os11g0592200.png|center|thumb|727px|'''Figure 4. (SnapShot)''' ''Expression level of OsPR4 genes in various tissues or organs. (A) Expression levels examined by quantitative real-time RT-PCR.<ref name="ref1" />.'']]

@@ Line 3: / Line 3: @@
 ==Annotated Information==
 ===Gene Symbol===
-*'''''Os11g0592200''''' '''<=>''' '''''PR4B,OsPR4b,OsPR-4b'''''
+* '''''Os11g0592200''''' '''<=>''' '''''OsPR4,OsPR4a,PR4a,OsPR-4'''''
+===Function===
-===Function===
+===Expression===
-Please input function information here.
+* OsPR4 genes showed diverse temporal–spatial expression patterns, and their expressions are responsive to Magnaporthe grisea infection. Interestingly, the OsPR4 genes are also responsive to abiotic stresses.
-===Expression===
+[[File:232-Os11g0592200.png|center|thumb|727px|'''Figure 4. (SnapShot)''' ''Expression level of OsPR4 genes in various tissues or organs. (A) Expression levels examined by quantitative real-time RT-PCR.<ref name="ref1" />.'']]
 ===Evolution===
-Please input evolution information here.
+* The PR4 genes are located in tandem on chromosome 11 and constitute a gene cluster with high sequence similarity to each other.
 You can also add sub-section(s) at will.

@@ Line 19: / Line 19: @@
 ==Labs working on this gene==
-Please input related labs here.
+* National Key Laboratory of Crop Genetic Improvement and National Center of Plant Gene Research, Huazhong Agricultural University, Wuhan 430070, China
+* College of Plant Science and Technology, Huazhong Agricultural University, Wuhan 430070, China
 ==References==
-Please input cited references here.
+<references>
 ==Structured Information==
 		 [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 11]]

← Older revision		Revision as of 01:25, 15 February 2017
Line 1:		Line 1:
−	The rice '''''Os11g0592100''''' was reported as '''''~~OsPR4~~''''' in 2011 <ref name="ref1" /> by researchers from China.	+	The rice '''''Os11g0592100''''' was reported as '''''OsPR4b''''' in 2011 <ref name="ref1" /> by researchers from China.

	==Annotated Information==		==Annotated Information==

← Older revision		Revision as of 13:58, 14 May 2015
Line 20:		Line 20:

	==Structured Information==		==Structured Information==
−	~~{{JaponicaGene\|~~	+	[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 11]]
−	~~GeneName = Os11g0592100\|~~
−	~~Description = Similar to Barwin\|~~
−	~~Version = NM_001074721.1 GI:115486090 GeneID:4350822\|~~
−	~~Length = 1420 bp\|~~
−	~~Definition = Oryza sativa Japonica Group Os11g0592100, complete gene.\|~~
−	~~Source = Oryza sativa Japonica Group~~
−
−	~~ORGANISM Oryza sativa Japonica Group~~
−	~~Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;~~
−	~~Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP~~
−	~~clade; Ehrhartoideae; Oryzeae; Oryza.~~
−	\|
−	~~Chromosome = [[:category:Japonica Chromosome 11\|Chromosome 11]]\|~~
−	~~AP = Chromosome 11:24348533..24349952\|~~
−	~~CDS = 24348596..24348877,24349568..24349744\|~~
−	~~GCID = <gbrowseImage1>~~
−	~~name=NC_008404:24348533..24349952~~
−	~~source=RiceChromosome11~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage1>\|~~
−	~~GSID = <gbrowseImage2>~~
−	~~name=NC_008404:24348533..24349952~~
−	~~source=RiceChromosome11~~
−	~~preset=GeneLocation~~
−	~~</gbrowseImage2>\|~~
−	CDNA = <cdnaseq>atgatggtcatggcgatgatgagaagggtggtgatggtggtggcggtgctgtgtgcggtagcaactatggccatggcacaagaggcgtccaacgtgcgtgccacgtaccactactaccgtccggcggaaaacaattgggatttgggggccccggccgttagcgcgtactgtgccacgtgggatgctgacaagccgcttgaatggcgccagaagtatggatggaccgccttctgtgggcccgttggtcccactggtcaggatgcatgtggcaaatgtctctcggtgacgaacacggcgacaggggatcagatcacggcgaggatcgtggaccagtgcgccaatggggggctggatttagactgggacaccgtcttctccaagatcgacagcgacggtcaaggctaccagaatggccacctcatcgtcgactaccagttcgtcgactgcggcgataactag</cdnaseq>\|
−	AA = <aaseq>MMVMAMMRRVVMVVAVLCAVATMAMAQEASNVRATYHYYRPAEN NWDLGAPAVSAYCATWDADKPLEWRQKYGWTAFCGPVGPTGQDACGKCLSVTNTATGD QITARIVDQCANGGLDLDWDTVFSKIDSDGQGYQNGHLIVDYQFVDCGDN</aaseq>\|
−	DNA = <dnaseqindica>64..345#1036..1212#atttcactagcatctagcaagtgcacaacacatctataaatcgtagtaaccaccttaggtgagatgatggtcatggcgatgatgagaagggtggtgatggtggtggcggtgctgtgtgcggtagcaactatggccatggcacaagaggcgtccaacgtgcgtgccacgtaccactactaccgtccggcggaaaacaattgggatttgggggccccggccgttagcgcgtactgtgccacgtgggatgctgacaagccgcttgaatggcgccagaagtatggatggaccgccttctgtgggcccgttggtcccactggtcaggatgcatgtggcaaatgtctctcggtaagaatgttttttttctttcttgcgttgagaaatgtaatacatattagatatcgagacaagcttataactttgaccattgtttttttttaaagtatatcactacaaaattagcaccttatgaaagtattttcaaataaaacttatgatgataaaatccaacttgtaaaactagttttacgatataatctacttagtatccccctcttacataacttacaccgattttaactacacgtcgtttcttaaaagatatttgctctggtccaacaaaaagtatttcaagataccagtatctcatggtaccaagatccaacgatcggaaacgatttggtaccatgaggtaccggtacctcgaggtacttttcgttggaccgtagcaaatctcttcttaaaaatctataaaaaaaattaaacgatatcgtattatcaaattaatttgcatgcaagtataattatactactcgcattcataaaaatatataatttaaaagttgtattggttaaaagtaaaatcacattggtcaatgaccaatgatgtcaagtaaaagggaaggctgagggtacaatcgaagggagtaattaaatgatgatatataacaaacttatctgtgacaggagagagtaaacaataaaattacacatgatcccccaagatatatgaccatggagtgtgtgtaatatttgcaggtgacgaacacggcgacaggggatcagatcacggcgaggatcgtggaccagtgcgccaatggggggctggatttagactgggacaccgtcttctccaagatcgacagcgacggtcaaggctaccagaatggccacctcatcgtcgactaccagttcgtcgactgcggcgataactagcagctaattaaccactcttataaacttccctacatatatatacacatttcggacagaggagtaattaatatatctctgcctgatgaatgaataaagtggctggtgaataattgtgatgctaggctgctgtagatcgatccgtttacacatgctcgaagtatcaataaaattgtgtggaaatgtgatggatttctgtggctaaaagcct</dnaseqindica>\|
−	~~Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001074721.1 RefSeq:Os11g0592100]\|~~
−	}}
−	[[Category:Genes]]
−	~~[[Category:Japonica mRNA]]~~
−	[[Category:Oryza Sativa Japonica Group]]
−	[[Category:Japonica ~~Genes]]~~
−	~~[[Category:Japonica Chromosome 11]]~~
−	~~[[Category:~~Chromosome 11]]

← Older revision		Revision as of 21:22, 22 July 2012
Line 1:		Line 1:
		+	Please input one-sentence summary here.
		+
		+	==Annotated Information==
		+	===Function===
		+	Please input function information here.
		+
		+	===Expression===
		+	Please input expression information here.
		+
		+	===Evolution===
		+	Please input evolution information here.
		+
		+	You can also add sub-section(s) at will.
		+
		+	==Labs working on this gene==
		+	Please input related labs here.
		+
		+	==References==
		+	Please input cited references here.
		+
		+	==Structured Information==
	{{JaponicaGene\|		{{JaponicaGene\|
	GeneName = Os11g0592100\|		GeneName = Os11g0592100\|