Os12g0188700 - Revision history

Guangyi: /* References */

2016-12-12T06:06:37Z

‎References

Guangyi: /* Mutant */

2016-12-12T06:05:53Z

‎Mutant

Guangyi: /* Annotated Information */

2016-12-12T06:05:36Z

‎Annotated Information

Guangyi at 06:02, 12 December 2016

2016-12-12T06:02:28Z

192.168.72.52 at 03:38, 15 May 2015

2015-05-15T03:38:40Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os12g0188700| Description = Similar to Thioredoxin (TRX)| Version = NM_001189897.1 GI:297728924 GeneID:9270622| Length = 1023 bp| Definition = ..."

2012-06-21T10:24:06Z

Created page with "{{JaponicaGene| GeneName = Os12g0188700| Description = Similar to Thioredoxin (TRX)| Version = NM_001189897.1 GI:297728924 GeneID:9270622| Length = 1023 bp| Definition = ..."

New page

{{JaponicaGene|
GeneName = Os12g0188700|
Description = Similar to Thioredoxin (TRX)|
Version = NM_001189897.1 GI:297728924 GeneID:9270622|
Length = 1023 bp|
Definition = Oryza sativa Japonica Group Os12g0188700, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 12|Chromosome 12]]|
AP = Chromosome 12:4460770..4461792|
CDS = 4461112..4461431,4461517..4461715|
GCID = <gbrowseImage1>
name=NC_008405:4460770..4461792
source=RiceChromosome12
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008405:4460770..4461792
source=RiceChromosome12
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggcgttggagacgtgcttcagagcctgggcgactctgcacgccccacagccaccgtcctccggcggcagtagggacagactcctcctctccggcgccggcagcagccagtccaagccaaggttgtccgtcgcctcgccgtcaccgctccgacctgcctcccgcttcgcctgccagtgcagcaacgtcgtcgacgaagtggtggtggcggacgagaagaactgggacagcatggtgctggggagcgaggcgccggtgctggtggagttctgggcaccgtggtgcggaccgtgcaggatgatcgcgccggtgatcgacgagctggccaaggagtacgtcggcaagatcaagtgctgcaaggtgaacacggacgactcaccaaacatcgccaccaactacggcatccggagcatccccaccgtcctcatgttcaagaacggcgagaagaaggagagcgtcatcggcgccgtccccaagaccaccctcgccaccatcatcgacaagtacgtcagcagctga</cdnaseq>|
AA = <aaseq>MALETCFRAWATLHAPQPPSSGGSRDRLLLSGAGSSQSKPRLSV ASPSPLRPASRFACQCSNVVDEVVVADEKNWDSMVLGSEAPVLVEFWAPWCGPCRMIA PVIDELAKEYVGKIKCCKVNTDDSPNIATNYGIRSIPTVLMFKNGEKKESVIGAVPKT TLATIIDKYVSS</aaseq>|
DNA = <dnaseqindica>362..681#78..276#acaaaaaattttctcctcctctttctcttctctctgtgtcactgcgtgtgaggagcgtagcttagagtgagaaaataatggcgttggagacgtgcttcagagcctgggcgactctgcacgccccacagccaccgtcctccggcggcagtagggacagactcctcctctccggcgccggcagcagccagtccaagccaaggttgtccgtcgcctcgccgtcaccgctccgacctgcctcccgcttcgcctgccagtgcagcaacgtcgtcgacgaaggtaaaacacatgtttgaccattcgtcatattctggtgcaaaacaaaacgaaaaccatcgtatgtgtgcgtgtggggtcgtggcagtggtggtggcggacgagaagaactgggacagcatggtgctggggagcgaggcgccggtgctggtggagttctgggcaccgtggtgcggaccgtgcaggatgatcgcgccggtgatcgacgagctggccaaggagtacgtcggcaagatcaagtgctgcaaggtgaacacggacgactcaccaaacatcgccaccaactacggcatccggagcatccccaccgtcctcatgttcaagaacggcgagaagaaggagagcgtcatcggcgccgtccccaagaccaccctcgccaccatcatcgacaagtacgtcagcagctgattgcatcatcatcgtcgtcttcttcctcttcttcttcagctgcatcaatcaaatcagacttgatcgatcagagcttcgtttgtaagttgtaactaagctaccccctgctttgcctctctatgtgtatcgccagccacccctttctcttcatcgtccttaattgttgtaatcctactactccatggaatcaatactgtaactattattgattgatgataccatcttttgactagcaaagaggaatcaaactgtgctacatatacatatatgatggccacatctgtttgaactttgattgtatatgcttcaaggcatcaagcggtaatcagggcaattcaattc</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001189897.1 RefSeq:Os12g0188700]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 12]]
[[Category:Chromosome 12]]

@@ Line 18: / Line 18: @@
 <br>
 ==References==
-Please input cited references here.
+<references>
 ==Structured Information==
       [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 12]]

@@ Line 9: / Line 9: @@
 <br>
 ===Mutant===
-*RNA interference (RNAi) of '''Ostrxm''' resulted in rice plants with developmental defects, including semidwarfism, pale-green leaves, abnormal chloroplast structure, and reduced carotenoid and chlorophyll content. '''Ostrxm'''RNAi plants showed remarkably decreased Fv/Fm values under high irradiance conditions (1,000 mmol m22 s21) with delayed recovery. Two-dimensional electrophoresis and matrix-assisted laser-desorption/ionization time-of-flight analysis showed that the levels of several chloroplast proteins critical for photosynthesis and biogenesis were significantly decreased in '''Ostrxm''' RNAi plants. Furthermore, 2-Cys peroxiredoxin, a known target of thioredoxin, was present in oxidized forms, and hydrogen peroxide levels were increased in '''Ostrxm''' RNAi plants.
+*RNA interference (RNAi) of '''Ostrxm''' resulted in rice plants with developmental defects, including semidwarfism, pale-green leaves, abnormal chloroplast structure, and reduced carotenoid and chlorophyll content. '''Ostrxm''' RNAi plants showed remarkably decreased Fv/Fm values under high irradiance conditions (1,000 mmol m22 s21) with delayed recovery. Two-dimensional electrophoresis and matrix-assisted laser-desorption/ionization time-of-flight analysis showed that the levels of several chloroplast proteins critical for photosynthesis and biogenesis were significantly decreased in '''Ostrxm''' RNAi plants. Furthermore, 2-Cys peroxiredoxin, a known target of thioredoxin, was present in oxidized forms, and hydrogen peroxide levels were increased in '''Ostrxm''' RNAi plants.
 <br>

@@ Line 6: / Line 6: @@
 <br>
 ===Function===
-Please input function information here.
+*The pleiotropic effects of '''Ostrxm''' RNAi suggest that Ostrxm plays an important role in the redox regulation of chloroplast target proteins involved in diverse physiological functions.
+<br>
-===Expression===
+===Mutant===
-Please input expression information here.
+*RNA interference (RNAi) of '''Ostrxm''' resulted in rice plants with developmental defects, including semidwarfism, pale-green leaves, abnormal chloroplast structure, and reduced carotenoid and chlorophyll content. '''Ostrxm'''RNAi plants showed remarkably decreased Fv/Fm values under high irradiance conditions (1,000 mmol m22 s21) with delayed recovery. Two-dimensional electrophoresis and matrix-assisted laser-desorption/ionization time-of-flight analysis showed that the levels of several chloroplast proteins critical for photosynthesis and biogenesis were significantly decreased in '''Ostrxm''' RNAi plants. Furthermore, 2-Cys peroxiredoxin, a known target of thioredoxin, was present in oxidized forms, and hydrogen peroxide levels were increased in '''Ostrxm''' RNAi plants.
+<br>
 ==Labs working on this gene==

@@ Line 1: / Line 1: @@
-Please input one-sentence summary here.
+The rice '''Os12g0188700''' was reported as '''	Ostrxm''' in 2008 <ref name="ref1" /> by researchers from the Korea.
+<br>
 ==Annotated Information==
 ===Function===
 Please input function information here.
@@ Line 14: / Line 17: @@
 ==Labs working on this gene==
-Please input related labs here.
+*Division of Applied Life Science (BK21 Program), EB-NCRC and Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju 660–701, Korea (Y.H.C., J.C.M., J.H.P., W.I.F., H.H.J.,J.R.L., Y.M.L., S.T.K., C.O.L., J.-Y.K., D.-J.Y., K.O.L., S.Y.L.);
+*Department of Molecular Biology, Pusan National University, Busan 609–735, Korea (H.-S.K., I.S.Z, C.-H.L.);
 ==References==
 Please input cited references here.

@@ Line 1: / Line 1: @@
-{{JaponicaGene|
+Please input one-sentence summary here.
-  ORGANISM  Oryza sativa Japonica Group
+==Annotated Information==
-            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
+===Function===
-            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
+Please input function information here.
-            clade; Ehrhartoideae; Oryzeae; Oryza.
+===Expression===
-Chromosome = [[:category:Japonica Chromosome 12|Chromosome 12]]|
+Please input expression information here.
-AP = Chromosome 12:4460770..4461792|
-CDS = 4461112..4461431,4461517..4461715|
+===Evolution===
-GCID = <gbrowseImage1>
+Please input evolution information here.
-name=NC_008405:4460770..4461792
-source=RiceChromosome12
+You can also add sub-section(s) at will.
-preset=GeneLocation
-</gbrowseImage1>|
+==Labs working on this gene==
-GSID = <gbrowseImage2>
+Please input related labs here.
-name=NC_008405:4460770..4461792
-source=RiceChromosome12
+==References==
-preset=GeneLocation
+Please input cited references here.
-</gbrowseImage2>|
-CDNA = <cdnaseq>atggcgttggagacgtgcttcagagcctgggcgactctgcacgccccacagccaccgtcctccggcggcagtagggacagactcctcctctccggcgccggcagcagccagtccaagccaaggttgtccgtcgcctcgccgtcaccgctccgacctgcctcccgcttcgcctgccagtgcagcaacgtcgtcgacgaagtggtggtggcggacgagaagaactgggacagcatggtgctggggagcgaggcgccggtgctggtggagttctgggcaccgtggtgcggaccgtgcaggatgatcgcgccggtgatcgacgagctggccaaggagtacgtcggcaagatcaagtgctgcaaggtgaacacggacgactcaccaaacatcgccaccaactacggcatccggagcatccccaccgtcctcatgttcaagaacggcgagaagaaggagagcgtcatcggcgccgtccccaagaccaccctcgccaccatcatcgacaagtacgtcagcagctga</cdnaseq>|
+==Structured Information==
-AA = <aaseq>MALETCFRAWATLHAPQPPSSGGSRDRLLLSGAGSSQSKPRLSV                     ASPSPLRPASRFACQCSNVVDEVVVADEKNWDSMVLGSEAPVLVEFWAPWCGPCRMIA                     PVIDELAKEYVGKIKCCKVNTDDSPNIATNYGIRSIPTVLMFKNGEKKESVIGAVPKT                     TLATIIDKYVSS</aaseq>|
+     [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 12]]