Os12g0189500 - Revision history

Xysj1981 at 06:07, 8 March 2017

2017-03-08T06:07:35Z

Xysj1981: /* Labs working on this gene */

2017-03-08T06:03:54Z

‎Labs working on this gene

Xysj1981: /* Labs working on this gene */

2017-03-08T06:03:17Z

‎Labs working on this gene

Xysj1981 at 06:01, 8 March 2017

2017-03-08T06:01:40Z

Rice2012: /* Labs working on this gene */

2015-06-13T09:16:08Z

‎Labs working on this gene

Lmw2015: /* References */

2015-06-12T04:31:33Z

‎References

Huanghs: /* References */

2014-06-03T16:14:02Z

‎References

Huanghs: /* Labs working on this gene */

2014-06-03T16:13:41Z

‎Labs working on this gene

Huanghs: /* Function */

2014-06-03T16:13:12Z

‎Function

Huanghs: /* Function */

2014-06-03T16:12:53Z

‎Function

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 ===Function===
-* IAA production in developing rice grains is controlled via expression of OsTAR1, OsYUC9, '''''OsYUC11''''' and that IAA may be important during starch deposition in addition to its previously suggested role early in grain development.
+* IAA production in developing rice grains is controlled via expression of '''''OsTAR1, OsYUC9,OsYUC11''''' and that IAA may be important during starch deposition in addition to its previously suggested role early in grain development.
 ===Expression===

@@ Line 15: / Line 15: @@
 ==Labs working on this gene==
-*Department of applied biological science, Al-Ghad International AppliedMedical Science University, Jeddah, Saudi Arabia
+* Molecular and Cellular Biology, University of New England, Armidale, New South Wales, Australia
 <references>
 * <ref name="ref1">

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 ==Labs working on this gene==
 *Department of applied biological science, Al-Ghad International AppliedMedical Science University, Jeddah, Saudi Arabia
 [[Category:Genes]]
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 [[Category:Japonica Chromosome 12]]
 [[Category:Chromosome 12]]
 ==Structured Information==

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-Please input one-sentence summary here.
+The rice '''''Os12g0189500''''' was reported as ''''' OsYUC11''''' in 2012 <ref name="ref1" /> by researchers from Australia.
 ==Annotated Information==
 ===Function===
-The increase in IAA content was strongly correlated with the expression of putative
+* IAA production in developing rice grains is controlled via expression of OsTAR1, OsYUC9, '''''OsYUC11''''' and that IAA may be important during starch deposition in addition to its previously suggested role early in grain development.
 ===Expression===
-Quantitative RT–PCR results for OsYUC3, OsYUC 9, OsYUC 11, OsYUC 12, OsYUC 14, OsTAR1, OsTAR2 and OsTDC1. Total RNA was extracted using a Qiagen RNeasy Kit. Reaction tubes were prepared using a CAS-1200 Robotic liquid-handling system, Qiagen. Each tube contained 250 ng
+* '''''OsYUC11''''' was expressed in endosperm, the expression of '''''OsYUC11''''' appeared to be confined to endosperm tissue
 ===Evolution===
-*Phylogenetic tree of Trp decarboxylases and sequence homologues: sequences were obtained by BLASTp search of proteomes of Rice (Os), Arabidopsis (At), Sorghum (Sb) and Poplar (POPTR) <ref name="pmid: 22025721" />. In addition, sequences of experimentally characterized TDCs from Catharanthus roseus (CatroTDC), Camptotheca acuminata (CaTDC1, CaTDC2), Ophiorrhiza pumila (OpTDC), TyDCs from Papaver somniferum (PapsoTYDC1, PapsoTYDC2) and Petroselinum crispum (PetcrTYD) and phenylacetaldehyde synthases from Petunia hybrida (PetuniaPAAS) and Rosa hybrid cultivar (RosaPAAS) were included. The tree was rooted with the putative TDC/TyDC from Chlamydomonas reinhardtii (Cre01.g028423). Multiple sequence alignments were carried out using MUSCLE (Edgar 2004); trees were constructed using PROTDIST and FITSCH； bootstrapping was conducted using SEQBOOT .
+* Phylogenetic analysis indicated that OsYUC11 and AtYUC10 belong to a separate clade of YUCCAs, which do not have orthologues outside the Angiosperms. This clade may have evolved with a specific role in endosperm.
 ==Labs working on this gene==

← Older revision		Revision as of 09:16, 13 June 2015
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	[[Category:Japonica Chromosome 12]]		[[Category:Japonica Chromosome 12]]
	[[Category:Chromosome 12]]		[[Category:Chromosome 12]]
		+	==Structured Information==

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-Please input cited references here.
 {{JaponicaGene|
 GeneName = Os12g0189500|

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 ==Labs working on this gene==
-Please input related labs here.
+*Department of applied biological science, Al-Ghad International AppliedMedical Science University, Jeddah, Saudi Arabia
 ==References==