Os12g0614600 - Revision history

Xysj2017: /* Annotated Information */

2017-02-14T15:40:58Z

‎Annotated Information

Xysj2017: /* Annotated Information */

2017-02-14T15:40:50Z

‎Annotated Information

Xysj2017 at 15:39, 14 February 2017

2017-02-14T15:39:02Z

192.168.72.52 at 03:49, 15 May 2015

2015-05-15T03:49:23Z

127.0.0.1: Created page with "{{JaponicaGene| GeneName = Os12g0614600| Description = Protein kinase-like domain containing protein| Version = NM_001073800.1 GI:115489561 GeneID:4352785| Length = 1760 b..."

2012-06-21T10:37:15Z

Created page with "{{JaponicaGene| GeneName = Os12g0614600| Description = Protein kinase-like domain containing protein| Version = NM_001073800.1 GI:115489561 GeneID:4352785| Length = 1760 b..."

New page

{{JaponicaGene|
GeneName = Os12g0614600|
Description = Protein kinase-like domain containing protein|
Version = NM_001073800.1 GI:115489561 GeneID:4352785|
Length = 1760 bp|
Definition = Oryza sativa Japonica Group Os12g0614600, complete gene.|
Source = Oryza sativa Japonica Group

ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
Chromosome = [[:category:Japonica Chromosome 12|Chromosome 12]]|
AP = Chromosome 12:26281668..26283427|
CDS = 26281758..26283212|
GCID = <gbrowseImage1>
name=NC_008405:26281668..26283427
source=RiceChromosome12
preset=GeneLocation
</gbrowseImage1>|
GSID = <gbrowseImage2>
name=NC_008405:26281668..26283427
source=RiceChromosome12
preset=GeneLocation
</gbrowseImage2>|
CDNA = <cdnaseq>atggtggcggcggtgcgcgcgccggtgaagccggagatggtggagctctcgccggcggcgatggagaggtactcctccgacgccgacacgacggcgccgaactcgagccttagctcggcggcgagcagcacggggagcctcgcgcggtgctcgagcctgtcgcgcctgtcgttcgactgctcgccgtcggccgccgtggcggcggcggcgacgtcgtgctcgccgccgcgggcgtcggtgctgttgcggccgcacaggtccggcgacgtcgcgtgggcggccatccgcgcggcttcgacgacctccgcggcgccgctaggcccgcgggacttcaagctcgtgcggcgcatcggcggcggcgacatcgggacggtgtacctgtgccgcctccggagctcgccggagagggagagcccgtgcatgtacgcgatgaaggtggtggaccggagggcggtggcgaggaagcagaagctggggcgcgcggcggcggagaagcggatcctgcggcagctggaccaccccttcctccccaccctcttcgccgacttcgacgccacgccgcacttctcctgcgccgtcatggagttctgccccggcggcgacctccactccctccgccaccgcatgccgtcccgccgcttcccgctcccctccgcccgcttctacgccgccgaggtgctcctcgccatcgagtacctccacatgatgggcatcgtctaccgcgacctcaagcccgagaacgtcctcatccgcgccgacggccacatcatgctcaccgacttcgacctctcgctgcagtccaccacctcgccgtctctcgacggcgacaccgacaccgacgacgaggccagcggtggcgcgtcctgcttcccggaccacctcctccggttcaagcggcggcggaacgccgtggcggcgccgcgtccgcggttcgtggcggagccggtggatgcgaggtcgtgctcgttcgtggggacgcacgagtacgtggcccccgaggtggcgagcggcggcgcgcatggcgcggccgtggactggtgggcgtacggggtgttcctctacgagctcatctacggccgtacgccgttcgccggcgctacaaacgaggcgacgctccgcaacatcgtccgccgcccgctcgccttcccctccggctccggctcgtgcggtcccgccgacgccgacgcgcgcgacctcatcgcccgcctcctcgccaaggaccccgccgcccgcctcggctcccgccgcggcgccgccgacgtcaagtcccaccccttcttcaagtccctcaacctcgccctcctccgttcgtcgcgcccgcccgtcgtccccggcgccggcgccggcgccgcgccgctacaccggtcgcagtcgtgcaaggcggcgccgacaacgccgccgccgccgacgacgacgaagccggcgaacgccaccgcgcggttcgacctcttctga</cdnaseq>|
AA = <aaseq>MVAAVRAPVKPEMVELSPAAMERYSSDADTTAPNSSLSSAASST GSLARCSSLSRLSFDCSPSAAVAAAATSCSPPRASVLLRPHRSGDVAWAAIRAASTTS AAPLGPRDFKLVRRIGGGDIGTVYLCRLRSSPERESPCMYAMKVVDRRAVARKQKLGR AAAEKRILRQLDHPFLPTLFADFDATPHFSCAVMEFCPGGDLHSLRHRMPSRRFPLPS ARFYAAEVLLAIEYLHMMGIVYRDLKPENVLIRADGHIMLTDFDLSLQSTTSPSLDGD TDTDDEASGGASCFPDHLLRFKRRRNAVAAPRPRFVAEPVDARSCSFVGTHEYVAPEV ASGGAHGAAVDWWAYGVFLYELIYGRTPFAGATNEATLRNIVRRPLAFPSGSGSCGPA DADARDLIARLLAKDPAARLGSRRGAADVKSHPFFKSLNLALLRSSRPPVVPGAGAGA APLHRSQSCKAAPTTPPPPTTTKPANATARFDLF</aaseq>|
DNA = <dnaseqindica>91..1545#acttcaccaccgcacagcgagctcgccgcggagagctttcgccggagaggtagacgacgacggcgacgacagtgtcacgtgctcacgttcatggtggcggcggtgcgcgcgccggtgaagccggagatggtggagctctcgccggcggcgatggagaggtactcctccgacgccgacacgacggcgccgaactcgagccttagctcggcggcgagcagcacggggagcctcgcgcggtgctcgagcctgtcgcgcctgtcgttcgactgctcgccgtcggccgccgtggcggcggcggcgacgtcgtgctcgccgccgcgggcgtcggtgctgttgcggccgcacaggtccggcgacgtcgcgtgggcggccatccgcgcggcttcgacgacctccgcggcgccgctaggcccgcgggacttcaagctcgtgcggcgcatcggcggcggcgacatcgggacggtgtacctgtgccgcctccggagctcgccggagagggagagcccgtgcatgtacgcgatgaaggtggtggaccggagggcggtggcgaggaagcagaagctggggcgcgcggcggcggagaagcggatcctgcggcagctggaccaccccttcctccccaccctcttcgccgacttcgacgccacgccgcacttctcctgcgccgtcatggagttctgccccggcggcgacctccactccctccgccaccgcatgccgtcccgccgcttcccgctcccctccgcccgcttctacgccgccgaggtgctcctcgccatcgagtacctccacatgatgggcatcgtctaccgcgacctcaagcccgagaacgtcctcatccgcgccgacggccacatcatgctcaccgacttcgacctctcgctgcagtccaccacctcgccgtctctcgacggcgacaccgacaccgacgacgaggccagcggtggcgcgtcctgcttcccggaccacctcctccggttcaagcggcggcggaacgccgtggcggcgccgcgtccgcggttcgtggcggagccggtggatgcgaggtcgtgctcgttcgtggggacgcacgagtacgtggcccccgaggtggcgagcggcggcgcgcatggcgcggccgtggactggtgggcgtacggggtgttcctctacgagctcatctacggccgtacgccgttcgccggcgctacaaacgaggcgacgctccgcaacatcgtccgccgcccgctcgccttcccctccggctccggctcgtgcggtcccgccgacgccgacgcgcgcgacctcatcgcccgcctcctcgccaaggaccccgccgcccgcctcggctcccgccgcggcgccgccgacgtcaagtcccaccccttcttcaagtccctcaacctcgccctcctccgttcgtcgcgcccgcccgtcgtccccggcgccggcgccggcgccgcgccgctacaccggtcgcagtcgtgcaaggcggcgccgacaacgccgccgccgccgacgacgacgaagccggcgaacgccaccgcgcggttcgacctcttctgagcatattgaccgttgctgtctgctactacctacccgcgtcgtcgccgacatcgccggcgggagacacgctccggccaccgtgacattaatttctcgttgacccttagctaccgcgttgaatgtacacactgttaattaattactactcctagttaatcactgctaatcaccttgctgttagtactactaaactaatataatctagtggcttaatt</dnaseqindica>|
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001073800.1 RefSeq:Os12g0614600]|
}}
[[Category:Genes]]
[[Category:Japonica mRNA]]
[[Category:Oryza Sativa Japonica Group]]
[[Category:Japonica Genes]]
[[Category:Japonica Chromosome 12]]
[[Category:Chromosome 12]]

@@ Line 2: / Line 2: @@
 ==Annotated Information==
-[[File:228-Os12g0614600.png|right|thumb|427px|'''Figure 4.''' ''Phenotypes of OsPID overexpression.<ref name="ref1" />.'']]
+[[File:228-Os12g0614600.png|right|thumb|327px|'''Figure 4.''' ''Phenotypes of OsPID overexpression.<ref name="ref1" />.'']]
 ===Gene Symbol===
 *'''''Os12g0614600''''' '''<=>''' '''''bif2,Osbif2,OsBIF2,OsPID'''''

@@ Line 2: / Line 2: @@
 ==Annotated Information==
 ===Gene Symbol===
 *'''''Os12g0614600''''' '''<=>''' '''''bif2,Osbif2,OsBIF2,OsPID'''''

@@ Line 1: / Line 1: @@
-Please input one-sentence summary here.
+The rice '''''Os12g0614600''''' was reported as '''''OsPID''''' in 2007 <ref name="ref1" /> by researchers from Japan.
 ==Annotated Information==
 ===Function===
-Please input function information here.
+* '''''PINOID''''', is a serine threonine protein kinase in Arabidopsis, controls auxin distribution through a positive control of subcellular localization of PIN auxin efflux carriers.
-===Expression===
+===Phenotypic analysis===
-Please input expression information here.
+* Constitutive overexpression of OsPID caused a variety of abnormalities, such as delay of adventitious root development, curled growth of shoots and agravitropism. Abnormalities observed in the plants that overexpress OsPID could be phenocopied by treatment with an inhibitor of active polar transport of auxin, indicating that OsPID could be involved in the control of polar auxin transport in rice.
 ===Evolution===
-Please input evolution information here.
+* Phylogenetic analysis showed that the rice genome contains a single PID ortholog, OsPID.
 You can also add sub-section(s) at will.
 ==Labs working on this gene==
-Please input related labs here.
+* Graduate School of Agriculture and Life Sciences, University of Tokyo, Yayoi, Bunkyo, Tokyo, 113-0032 Japan
 ==References==
-Please input cited references here.
+<references>
 ==Structured Information==
       [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 12]]

@@ Line 1: / Line 1: @@
-{{JaponicaGene|
+Please input one-sentence summary here.
-  ORGANISM  Oryza sativa Japonica Group
+==Annotated Information==
-            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
+===Function===
-            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
+Please input function information here.
-            clade; Ehrhartoideae; Oryzeae; Oryza.
+===Expression===
-Chromosome = [[:category:Japonica Chromosome 12|Chromosome 12]]|
+Please input expression information here.
-AP = Chromosome 12:26281668..26283427|
-CDS = 26281758..26283212|
+===Evolution===
-GCID = <gbrowseImage1>
+Please input evolution information here.
-name=NC_008405:26281668..26283427
-source=RiceChromosome12
+You can also add sub-section(s) at will.
-preset=GeneLocation
-</gbrowseImage1>|
+==Labs working on this gene==
-GSID = <gbrowseImage2>
+Please input related labs here.
-name=NC_008405:26281668..26283427
-source=RiceChromosome12
+==References==
-preset=GeneLocation
+Please input cited references here.
-</gbrowseImage2>|
-CDNA = <cdnaseq>atggtggcggcggtgcgcgcgccggtgaagccggagatggtggagctctcgccggcggcgatggagaggtactcctccgacgccgacacgacggcgccgaactcgagccttagctcggcggcgagcagcacggggagcctcgcgcggtgctcgagcctgtcgcgcctgtcgttcgactgctcgccgtcggccgccgtggcggcggcggcgacgtcgtgctcgccgccgcgggcgtcggtgctgttgcggccgcacaggtccggcgacgtcgcgtgggcggccatccgcgcggcttcgacgacctccgcggcgccgctaggcccgcgggacttcaagctcgtgcggcgcatcggcggcggcgacatcgggacggtgtacctgtgccgcctccggagctcgccggagagggagagcccgtgcatgtacgcgatgaaggtggtggaccggagggcggtggcgaggaagcagaagctggggcgcgcggcggcggagaagcggatcctgcggcagctggaccaccccttcctccccaccctcttcgccgacttcgacgccacgccgcacttctcctgcgccgtcatggagttctgccccggcggcgacctccactccctccgccaccgcatgccgtcccgccgcttcccgctcccctccgcccgcttctacgccgccgaggtgctcctcgccatcgagtacctccacatgatgggcatcgtctaccgcgacctcaagcccgagaacgtcctcatccgcgccgacggccacatcatgctcaccgacttcgacctctcgctgcagtccaccacctcgccgtctctcgacggcgacaccgacaccgacgacgaggccagcggtggcgcgtcctgcttcccggaccacctcctccggttcaagcggcggcggaacgccgtggcggcgccgcgtccgcggttcgtggcggagccggtggatgcgaggtcgtgctcgttcgtggggacgcacgagtacgtggcccccgaggtggcgagcggcggcgcgcatggcgcggccgtggactggtgggcgtacggggtgttcctctacgagctcatctacggccgtacgccgttcgccggcgctacaaacgaggcgacgctccgcaacatcgtccgccgcccgctcgccttcccctccggctccggctcgtgcggtcccgccgacgccgacgcgcgcgacctcatcgcccgcctcctcgccaaggaccccgccgcccgcctcggctcccgccgcggcgccgccgacgtcaagtcccaccccttcttcaagtccctcaacctcgccctcctccgttcgtcgcgcccgcccgtcgtccccggcgccggcgccggcgccgcgccgctacaccggtcgcagtcgtgcaaggcggcgccgacaacgccgccgccgccgacgacgacgaagccggcgaacgccaccgcgcggttcgacctcttctga</cdnaseq>|
+==Structured Information==
-AA = <aaseq>MVAAVRAPVKPEMVELSPAAMERYSSDADTTAPNSSLSSAASST                     GSLARCSSLSRLSFDCSPSAAVAAAATSCSPPRASVLLRPHRSGDVAWAAIRAASTTS                     AAPLGPRDFKLVRRIGGGDIGTVYLCRLRSSPERESPCMYAMKVVDRRAVARKQKLGR                     AAAEKRILRQLDHPFLPTLFADFDATPHFSCAVMEFCPGGDLHSLRHRMPSRRFPLPS                     ARFYAAEVLLAIEYLHMMGIVYRDLKPENVLIRADGHIMLTDFDLSLQSTTSPSLDGD                     TDTDDEASGGASCFPDHLLRFKRRRNAVAAPRPRFVAEPVDARSCSFVGTHEYVAPEV                     ASGGAHGAAVDWWAYGVFLYELIYGRTPFAGATNEATLRNIVRRPLAFPSGSGSCGPA                     DADARDLIARLLAKDPAARLGSRRGAADVKSHPFFKSLNLALLRSSRPPVVPGAGAGA                     APLHRSQSCKAAPTTPPPPTTTKPANATARFDLF</aaseq>|
+     [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 12]]