Sucrose synthase - Revision history

Rice2012: /* Brief Introduction */

2013-07-18T03:20:11Z

‎Brief Introduction

Xysj2012 at 03:38, 17 July 2013

2013-07-17T03:38:48Z

Xysj2012 at 03:38, 17 July 2013

2013-07-17T03:38:35Z

Xysj2012: /* Brief Introduction */

2013-07-17T02:35:04Z

‎Brief Introduction

Xysj2012: /* Indica Group */

2013-07-17T02:32:56Z

‎Indica Group

Xysj2012: /* Brief Introduction */

2013-07-17T02:32:45Z

‎Brief Introduction

Xysj2012: Created page with "==Brief Introduction== '''Figure 1.''' ''The role of Sucrose synthase'' * [http://en.wikipedia.org/wiki/Sucrose_synthase '''Sucrose ..."

2013-07-17T02:32:21Z

Created page with "==Brief Introduction== right|thumb|220px|'''Figure 1.''' ''The role of Sucrose synthase'' * [http://en.wikipedia.org/wiki/Sucrose_synthase '''Sucrose ..."

New page

==Brief Introduction==
[[File:Sus_pathway.jpg|right|thumb|220px|'''Figure 1.''' ''The role of Sucrose synthase'']]
* [http://en.wikipedia.org/wiki/Sucrose_synthase '''Sucrose synthase'''], encoded by a small multigene family, has been regared as a key enzyme involved in energy metabolism of plants which can catalyse the reversible conversion of sucrose and UDP to UDP-glucose and fructose<ref name="ref1" /><ref name="ref2" /><ref name="ref3" /><ref name="ref4" /><ref name="ref5" />.
* The study of sus gene family has been carried out in several plant species. So far, six sus gene members in ''Arabidopsis''<ref name="ref2" />, seven in ''Populus''<ref name="ref3" /> and seven in cotton<ref name="ref4" />, five in ''Saccharum''<ref name="ref5" /> have been identified.
* The previous study by Hirose ''et al''. showed that there were six sus genes in ''Oryza sativa Japonica Group''<ref name="ref1" />, namely [[Os03g0401300|'''''Os03g0401300''''']], [[Os06g0194900|'''''Os06g0194900''''']], [[Os07g0616800|'''''Os07g0616800''''']], [[Os03g0340500|'''''Os03g0340500''''']], [[Os04g0309600|'''''Os04g0309600''''']] and [[Os02g0831500|'''''Os02g0831500''''']]. Recently, three new sus genes ( [[Os04g0249500|'''''Os04g0249500''''']], [[Os02g0184400|'''''Os02g0184400''''']] and [[Os08g0301500|'''''Os08g0301500''''']] ) were identified in ''Oryza sativa Japonica Group'' through NCBI BLASTP, HMM model and [http://www.ebi.ac.uk/interpro/ InterPro].
[[File:Os02g0831500.png|center|thumb|1000px|'''Figure 1.''' ''Gene Structure of '''Os02g0831500''' '']]
* Sucrose synthase have specific functions in regulating carbon sotrage and metabolic structure of plant cell. During plants development, sus is very important for cellulose deposition and cell wall formation and they can transport sucrose across the tonoplast from the vacuole to the cytosol in sucrose-storing organs. In addition, Sus is also considered to be associated with responses to biotic and abiotic stresses and nitrogen fixation as well as arbuscule maturation and maintenance in mycorrhizal roots of legumes<ref name="ref2" /><ref name="ref3" /><ref name="ref4" /><ref name="ref5" />.
*'''Pfam: [http://pfam.janelia.org/family/PF00862 PF00862]''' <font color=green>'''||'''</font> '''InterPro: [http://www.ebi.ac.uk/interpro/entry/IPR000368 IPR000368]''' <font color=green>'''||'''</font>

← Older revision		Revision as of 02:32, 17 July 2013
Line 69:		Line 69:

	\|}		\|}
		+	==References==
		+	<references>
		+	* <ref name="ref1">
		+	Hirose, Tatsuro, Graham N. Scofield, and Tomio Terao. "An expression analysis profile for the entire sucrose synthase gene family in rice." Plant Science 174.5 (2008): 534-543.
		+	</ref>
		+	* <ref name="ref2">
		+	Bieniawska, Zuzanna, et al. "Analysis of the sucrose synthase gene family in Arabidopsis." The Plant Journal 49.5 (2007): 810-828.
		+	</ref>
		+	* <ref name="ref3">
		+	Zhang, Deqiang, et al. "The sucrose synthase gene family in Populus: structure, expression, and evolution." Tree Genetics & Genomes 7.3 (2011): 443-456.
		+	</ref>
		+	* <ref name="ref4">
		+	Chen, Aiqun, et al. "Analyses of the sucrose synthase gene family in cotton: structure, phylogeny and expression patterns." BMC plant biology 12.1 (2012): 85.
		+	</ref>
		+	* <ref name="ref5">
		+	Zhang, Jisen, et al. "Haplotype analysis of sucrose synthase gene family in three Saccharum species." BMC genomics 14.1 (2013): 1-11.
		+	</ref>
		+	</references>

← Older revision		Revision as of 02:32, 17 July 2013
Line 7:		Line 7:
	* Sucrose synthase have specific functions in regulating carbon sotrage and metabolic structure of plant cell. During plants development, sus is very important for cellulose deposition and cell wall formation and they can transport sucrose across the tonoplast from the vacuole to the cytosol in sucrose-storing organs. In addition, Sus is also considered to be associated with responses to biotic and abiotic stresses and nitrogen fixation as well as arbuscule maturation and maintenance in mycorrhizal roots of legumes<ref name="ref2" /><ref name="ref3" /><ref name="ref4" /><ref name="ref5" />.		* Sucrose synthase have specific functions in regulating carbon sotrage and metabolic structure of plant cell. During plants development, sus is very important for cellulose deposition and cell wall formation and they can transport sucrose across the tonoplast from the vacuole to the cytosol in sucrose-storing organs. In addition, Sus is also considered to be associated with responses to biotic and abiotic stresses and nitrogen fixation as well as arbuscule maturation and maintenance in mycorrhizal roots of legumes<ref name="ref2" /><ref name="ref3" /><ref name="ref4" /><ref name="ref5" />.
	*'''Pfam: [http://pfam.janelia.org/family/PF00862 PF00862]''' <font color=green>'''\|\|'''</font> '''InterPro: [http://www.ebi.ac.uk/interpro/entry/IPR000368 IPR000368]''' <font color=green>'''\|\|'''</font>		*'''Pfam: [http://pfam.janelia.org/family/PF00862 PF00862]''' <font color=green>'''\|\|'''</font> '''InterPro: [http://www.ebi.ac.uk/interpro/entry/IPR000368 IPR000368]''' <font color=green>'''\|\|'''</font>
		+	==''Japonica'' Group==
		+	{\| style="background:#A1A3A6; width:85%;" border="0"
		+	\|-style="background:white; color:black" align="center"
		+	!
		+	'''[[Os03g0401300]]'''
		+	\|\|
		+	'''[[Os06g0194900]]'''
		+	\|\|
		+	'''[[Os07g0616800]]'''
		+	\|\|
		+	'''[[Os03g0340500]]'''
		+	\|\|
		+	'''[[Os04g0309600]]'''
		+	\|-style="background:white; color:black" align="center"
		+	!
		+	'''[[Os04g0249500]]'''
		+	\|\|
		+	'''[[Os02g0831500]]'''
		+	\|\|
		+	'''[[Os02g0184400]]'''
		+	\|\|
		+	'''[[Os08g0301500]]'''
		+	\|\|
		+
		+	\|}
		+
		+	==''Indica'' Group==
		+	{\| style="background:#A1A3A6; width:85%;" border="0"
		+	\|-style="background:white; color:black" align="center"
		+	!
		+	'''[[BGIOSGA010570]]'''
		+	\|\|
		+	'''[[BGIOSGA021739]]'''
		+	\|\|
		+	'''[[BGIOSGA026140]]'''
		+	\|\|
		+	'''[[BGIOSGA010770]]'''
		+	\|\|
		+	'''[[BGIOSGA015483]]'''
		+	\|-style="background:white; color:black" align="center"
		+	!
		+	'''[[BGIOSGA009348]]'''
		+	\|\|
		+	'''[[BGIOSGA009346]]'''
		+	\|\|
		+	'''[[BGIOSGA021710]]'''
		+	\|\|
		+	'''[[BGIOSGA020798]]'''
		+	\|\|
		+	'''[[BGIOSGA007680]]'''
		+	\|-style="background:white; color:black" align="center"
		+	!
		+	'''[[BGIOSGA000239]]'''
		+	\|\|
		+	'''[[BGIOSGA034240]]'''
		+	\|\|
		+	'''[[BGIOSGA028425]]'''
		+	\|\|
		+
		+	\|\|
		+
		+	\|}

@@ Line 2: / Line 2: @@
 [[File:Sus_pathway.jpg|right|thumb|220px|'''Figure 1.''' ''The role of Sucrose synthase'']]
 * [http://en.wikipedia.org/wiki/Sucrose_synthase '''Sucrose synthase'''], encoded by a small multigene family, has been regared as a key enzyme involved in energy metabolism of plants which can catalyse the reversible conversion of sucrose and UDP to UDP-glucose and fructose<ref name="ref1" /><ref name="ref2" /><ref name="ref3" /><ref name="ref4" /><ref name="ref5" />.
-* The study of sus gene family has been carried out in several plant species. So far, six sus gene members in ''Arabidopsis''<ref name="ref2" />, seven in ''Populus''<ref name="ref3" /> and seven in cotton<ref name="ref4" />, five in ''Saccharum''<ref name="ref5" /> have been identified.
+* The study of sus gene family has been carried out in several plant species. So far, six sus gene members in ''Arabidopsis''<ref name="ref2" />, seven in ''Populus''<ref name="ref3" />, seven in cotton<ref name="ref4" /> and five in ''Saccharum''<ref name="ref5" /> have been identified.
 * The previous study by Hirose ''et al''. showed that there were six sus genes in ''Oryza sativa Japonica Group''<ref name="ref1" />, namely [[Os03g0401300|'''''Os03g0401300''''']], [[Os06g0194900|'''''Os06g0194900''''']], [[Os07g0616800|'''''Os07g0616800''''']], [[Os03g0340500|'''''Os03g0340500''''']], [[Os04g0309600|'''''Os04g0309600''''']] and [[Os02g0831500|'''''Os02g0831500''''']]. Recently, three new sus genes ( [[Os04g0249500|'''''Os04g0249500''''']], [[Os02g0184400|'''''Os02g0184400''''']] and [[Os08g0301500|'''''Os08g0301500''''']] ) were identified in ''Oryza sativa Japonica Group'' through NCBI BLASTP, HMM model and [http://www.ebi.ac.uk/interpro/ InterPro].
 <br>

@@ Line 4: / Line 4: @@
 * The study of sus gene family has been carried out in several plant species. So far, six sus gene members in ''Arabidopsis''<ref name="ref2" />, seven in ''Populus''<ref name="ref3" /> and seven in cotton<ref name="ref4" />, five in ''Saccharum''<ref name="ref5" /> have been identified.
 * The previous study by Hirose ''et al''. showed that there were six sus genes in ''Oryza sativa Japonica Group''<ref name="ref1" />, namely [[Os03g0401300|'''''Os03g0401300''''']], [[Os06g0194900|'''''Os06g0194900''''']], [[Os07g0616800|'''''Os07g0616800''''']], [[Os03g0340500|'''''Os03g0340500''''']], [[Os04g0309600|'''''Os04g0309600''''']] and [[Os02g0831500|'''''Os02g0831500''''']]. Recently, three new sus genes ( [[Os04g0249500|'''''Os04g0249500''''']], [[Os02g0184400|'''''Os02g0184400''''']] and [[Os08g0301500|'''''Os08g0301500''''']] ) were identified in ''Oryza sativa Japonica Group'' through NCBI BLASTP, HMM model and [http://www.ebi.ac.uk/interpro/ InterPro].
 [[File:Os02g0831500.png|center|thumb|1000px|'''Figure 1.''' ''Gene Structure of '''Os02g0831500''' '']]
 * Sucrose synthase have specific functions in regulating carbon sotrage and metabolic structure of plant cell. During plants development, sus is very important for cellulose deposition and cell wall formation and they can transport sucrose across the tonoplast from the vacuole to the cytosol in sucrose-storing organs. In addition, Sus is also considered to be associated with responses to biotic and abiotic stresses and nitrogen fixation as well as arbuscule maturation and maintenance in mycorrhizal roots of legumes<ref name="ref2" /><ref name="ref3" /><ref name="ref4" /><ref name="ref5" />.
 *'''Pfam: [http://pfam.janelia.org/family/PF00862 PF00862]'''    <font color=green>'''||'''</font>      '''InterPro: [http://www.ebi.ac.uk/interpro/entry/IPR000368 IPR000368]''' <font color=green>'''||'''</font>
 ==''Japonica'' Group==
 {| style="background:#A1A3A6; width:85%;" border="0"