Difference between revisions of "BGIOSGA016863"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA016863| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016863, complete gene.| tag = OS04G05...")
 
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA016863|
 
GeneName = BGIOSGA016863|

Latest revision as of 16:10, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA016863

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016863, complete gene.

LocusTag

OS04G0543900

Ensembl Transcript ID

BGIOSGA016863-TA

Ensembl Protein ID

BGIOSGA016863-PA

Length

3879

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26020747..26024625

Sequence Coding Region

26020747..26020854,26020962..26021075,26022517..26022738,26022813..26022887,26022976..26023092
,26023548..26023798,26024089..26024164,26024265..26024351,26024440..26024625

Genome Context

<gbrowseImage1> name=IndicaChromosome04:26020747..26024625 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:26020747..26024625 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAACGCGCTCGCCGCCACCAGCCGTAACTTCCGGCAGGCCGCCAGGCTGCTCGGCCTCGACTCCAAGCTCGAGAAGAGCCTCCTGATCCCGTTCCGCGAGATCAAGGTGGAATGCACCATCCCCAAAGACGATGGAACCTTGGCGTCCTTCATTGGGTTCCGCGTGCAGCACGACAATGCCCGCGGGCCAATGAAAGGTGGCATTCGCTATCACCCTGAGGTTGATCCAGATGAAGTAAATGCACTTGCTCAACTAATGACATGGAAGACTGCTGTTGCAGCAATTCCATATGGTGGAGCAAAGGGTGGGATTGGATGCGCTCCTGGTGAATTAAGCACGAGTGAGCTGGAGCGTTTGACACGTGTATTTACACAGAAAATTCATGATCTTATTGGAGCTCATACTGACGTGCCAGCTCCTGACATGGGAACTAATTCACAGACCATGGCTTGGATTTTGGATGAGTACTCGAAATTCCATGGTCATTCACCGGCAGTTGTCACTGGGAAGCCAATAGATCTTGGTGGATCATTAGGTAGAGATGCTGCTACAGGAAGAGGTGTGATGTACGCTACTGAGGCTCTTTTGGCTGAACATGGAAAGTCCATTTCTGGATCAACCTTTGTTATCCAGGGTTTTGGTAATGTTGGTTCATGGGCTGCACGAATCATCCATGAGAAGGGTGGCAAGGTGATTGCACTTGGAGATGTGACAGGCTCAATCAGAAACAAGAATGGGTTAGACATACCTGCTCTGATGAAGCACAGAAATGAGGGTGGTGCTTTGAAAGATTTTCATGATGCGGAAGTCATGGATTCTTCAGAGCTACTAGTGCATGAATGCGATGTTCTCATCCCATGCGCTTTAGGTGGAGTGCTCAACAGGGAAAATGCACCTGATGTGAAGGCCAAATTTATAATTGAAGCTGCTAATCATCCAACTGATCCAGAAGCTGACGAGATTCTTGCCAAGAAGGGAGTGACCATATTACCTGACATTTACGCCAACTCCGGTGGTGTGATCGTTAGCTATTTTGAGTGGGTTCAGAACATTCAAGGGTTCATGTGGGATGAGGAGAAGGTGAACATGGAGCTCCACAAGTACATGAACAATTCTTTCCAGCACATCAAGGCCATGTGTAAATCTCATGATTGCAACCTGAGGATGGGGGCGTTCACCCTGGGAGTCAACCGGGTTGCACGTGCCACCCTCTTGAGGGGATGGGAGGCATGA</cdnaseq>

Protein Sequence

<aaseq>MNALAATSRNFRQAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFIGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAAIPYGGAKGGIGCAPGELSTSELERLTRVFTQKIHDLIGAHTDVPAPDMGTNSQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVMYATEALLAEHGKSISGSTFVIQGFGNVGSWAARIIHEKGGKVIALGDVTGSIRNKNGLDIPALMKHRNEGGALKDFHDAEVMDSSELLVHECDVLIPCALGGVLNRENAPDVKAKFIIEAANHPTDPEADEILAKKGVTILPDIYANSGGVIVSYFEWVQNIQGFMWDEEKVNMELHKYMNNSFQHIKAMCKSHDCNLRMGAFTLGVNRVARATLLRGWEA</aaseq>

Gene Sequence

<dnaseqindica>1..108#216..329#1771..1992#2067..2141#2230..2346#2802..3052#3343..3418#3519..3605#3694..3879#ATGAACGCGCTCGCCGCCACCAGCCGTAACTTCCGGCAGGCCGCCAGGCTGCTCGGCCTCGACTCCAAGCTCGAGAAGAGCCTCCTGATCCCGTTCCGCGAGATCAAGGTGAGACGGGGGTTTTTTTTTTTTTGATTCCTGTTTCCAGCTTGTTTTGCTGCGGTTGCTGGCTTTGTTGTTTCATCAGGCGTAGCGTAACCCCGCTCTCTGTTCAGGTGGAATGCACCATCCCCAAAGACGATGGAACCTTGGCGTCCTTCATTGGGTTCCGCGTGCAGCACGACAATGCCCGCGGGCCAATGAAAGGTGGCATTCGCTATCACCCTGAGGTGAGGATTGTGGTTTGATGAGAATCTGTTTTTGATTTTGTCCAGTAATAATGCCGGGGATGTAAATCATCTTCCTTATTATCTGGAAATTTGACCGGAGATGATTAAGCATGAATAAATAGTGAAGTGGTTATAAACTCGGAATGTTTTGACAGTGACTGTCTCATGTCAATGGGATCATTGTTTCGTTTTGGTGAGTTATTAGATCTACGGTACTTGTTAACTTGTTATTCCTTCCTTGTTTGCATATGGCCTTTCCAGTTCGGTGAGTTATTCTTTTAGGAAATGTGCGTGATGTTACTTTCAGTTTCATACCTTTATTTGTAATCTACTTTATGATATTTTGTGGATCGTCTGGGCACTGGGCTGTCAGTTTGTCATGCAGATGGCGTGAACTGAAAATCCTTGATATTTTGCAAAGCATGTGTTGCTTTTGTACTACTATGCGCTTATGTGCTTTTACATTCAGATTTATATTTCTTTCTGTTGAACTGTCAACCTAAATGTATCTTTTCCATACTGACAAAAGTATCCCAATGGGCACATGCCAATCTTCTTCCTCTGTCAAATTGTTTCTGTAATTTCTGTTTTTTCTTGAACTATTATTTAACTGGCATTTTGAGAAACTAGAAAGTTTGATGCCCAGACATGCTACAGATGCTAGTATTCAGTATTGGAGACAACCACTCAACCAGCTTTGTTTTCTTCTGTGATAATTTCTTTTGTTCTTTACTGCTCCAATCATACTTCGGTTCTTGTTGCTGGAAGCCATTAAATTTCATACAGATAGGTGCTTGTTATAATTAAACCTAGGGAATAATCCCTTAGGTTTTTCCAAAACTGCGAGCTTATGGTATTTTCCTGTTGAAAATGCCAGAGTTATATATGTGCACCATTTAGGTTCCAAATGAAGATGAGGGATTTTCAAATTTTAGGTTAAAAAAAAACAGTCTCCTGGAGTACTAATAAATATAAAGCATTAAAAGCGCTATGAGCTTCTGAGACTTTTATTGTCGTGTTTTACTTTGTACTTAATAAATAAATGGATTTCCTTTGATGATGAATTGATGTTTGTTATCAGTTAGCTAACAGAAAAGCAGCTAACCTATCAATCAATTCCTAGAGTAAGAAATTGATGTCAGCAGTTGTTAATTTGCAAAGGAATTTTTTGTAAGTATTACCGTAAGACTTTCACAAGCTAATGTAGAAAGTCAACTATAATATTTTCTGCTGACCATACTTTGTCTTATAAATTATTCATTGTAGTCTGAGATTCATCTGTTTCTCATTTTTAAAACTACAATTGATAATGAATTTTGGGTGAGGTTCCCCCTCCTTTATAACTTTCTTATCTTCTTAAATGGCACCCAGCTCTCTTGCGTGTTCGAGAAAAAATAAAACTAAAACTAATAAGCTATGGTTTCACCATTCTGCTTTGCAGGTTGATCCAGATGAAGTAAATGCACTTGCTCAACTAATGACATGGAAGACTGCTGTTGCAGCAATTCCATATGGTGGAGCAAAGGGTGGGATTGGATGCGCTCCTGGTGAATTAAGCACGAGTGAGCTGGAGCGTTTGACACGTGTATTTACACAGAAAATTCATGATCTTATTGGAGCTCATACTGACGTGCCAGCTCCTGACATGGGAACTAATTCACAGGTATATTCTGCTTTCTCTAGTATTTTTCTACTACTTCCCTTCATCATGTAACATCCCCTGTAATTTTGACACAGACCATGGCTTGGATTTTGGATGAGTACTCGAAATTCCATGGTCATTCACCGGCAGTTGTCACTGGGAAGCCAATAGTAAGTATACTATACAACAACACAAATCTAGTTTGTGTAAATAAACAATTTACATCCAGTGATTGTATTTTGGATATTTTTGTTGCAGGATCTTGGTGGATCATTAGGTAGAGATGCTGCTACAGGAAGAGGTGTGATGTACGCTACTGAGGCTCTTTTGGCTGAACATGGAAAGTCCATTTCTGGATCAACCTTTGTTATCCAGGTCAGTCATAATTAATAATCGATTGATTCTTGCTATGCGGATTATTCCTAGGATGGTTGAAGGACAATACTCCATCCGTCCTAGAATATAGAAGTTTTAGGCTTGACACGGTTATTAAGAAAGTAGGTAGAAGTGAGAGGTGGATGGTCATAATTGGATGAGTAGTGGAGGTAGGTGGAAAAAGTGAATGGTAGAGTGCTGTTATTGGTTGGGAAGAGAATGTTGGTGGAGAAGTTGTTATATTTTAGGACAAATCCTGAGGGCTAAAAGTTGTTATATTTTGGTACGAAGGGAGTAACATGCATCATCATAACAGCAAAAAAAAAAAAATCTAGCTTTCTTCCTGAAAATTTTAAAACCGCAATTCAGCTATCAAATCAGTCTGTTCATTATCATTTTATCAGTATGCCAGCAACATATGTATTTTGTTTGTAATAATCAATGGAATTTTCCAGGGTTTTGGTAATGTTGGTTCATGGGCTGCACGAATCATCCATGAGAAGGGTGGCAAGGTGATTGCACTTGGAGATGTGACAGGCTCAATCAGAAACAAGAATGGGTTAGACATACCTGCTCTGATGAAGCACAGAAATGAGGGTGGTGCTTTGAAAGATTTTCATGATGCGGAAGTCATGGATTCTTCAGAGCTACTAGTGCATGAATGCGATGTTCTCATCCCATGCGCTTTAGGTGGAGTGCTCAACAGGTAAAAGCTAGTGTCCATGTCGATCCTTAAATTTTCTGCCAATATGAGTTGTTTATCGGGGTCGGGGATGACTCTTGAAACTCTGTCCTTACCTGGTTGCAGTTGCATTTTCACCCATTATACCTATCTGTTTTTTCTTTTTTGTACTTTTGACATTAAATGGTACACAGTTGTTTTAGACGGTAATCTTGTTACATGTTGAAGAACCTATTTTATCTGATTATTCTAGTTCAACAGTAGTATGCACCAAGAAAAAAATAGCCAATTTACATATAATTGATCTTCTGAAGGGAAAATGCACCTGATGTGAAGGCCAAATTTATAATTGAAGCTGCTAATCATCCAACTGATCCAGAAGCTGACGAGGTAACCACAGAACAAAACATTGTACCCTAACTTTGTCTTTGAGAAACATCAGAAATGTTGCCAATTTTGGCAGTTCTGATTGATGCTGTATGCACTACAGATTCTTGCCAAGAAGGGAGTGACCATATTACCTGACATTTACGCCAACTCCGGTGGTGTGATCGTTAGCTATTTTGAGTGGGTTCAGGTAATTGAAATGCCGGTTCCTAAGATCTTGTTTCGCATTAGCTTTGGATGAATACAGCATCTCCCTTATGCGCTTTGGACGGTTGCAGAACATTCAAGGGTTCATGTGGGATGAGGAGAAGGTGAACATGGAGCTCCACAAGTACATGAACAATTCTTTCCAGCACATCAAGGCCATGTGTAAATCTCATGATTGCAACCTGAGGATGGGGGCGTTCACCCTGGGAGTCAACCGGGTTGCACGTGCCACCCTCTTGAGGGGATGGGAGGCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016863