Difference between revisions of "BGIOSGA017056"
(Created page with "{{IndicaGene|
GeneName = BGIOSGA017056|
Description = Chloroplast l-ascorbate peroxidase|
Definition = Oryza sativa Indica Group BGIOSGA017056, complete gene.|
tag = B0403...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{IndicaGene| | {{IndicaGene| | ||
GeneName = BGIOSGA017056| | GeneName = BGIOSGA017056| | ||
Latest revision as of 16:11, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
BGIOSGA017056 |
|---|---|
| Description |
Chloroplast l-ascorbate peroxidase |
| Definition |
Oryza sativa Indica Group BGIOSGA017056, complete gene. |
| LocusTag |
B0403H10-OSIGBA0105A11.15 |
| Ensembl Transcript ID |
BGIOSGA017056-TA |
| Ensembl Protein ID |
BGIOSGA017056-PA |
| Length |
2326 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:29227565..29229890 |
| Sequence Coding Region |
29227565..29227681,29227774..29227869,29228072..29228156,29228244..29228278,29228371..29228436 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome04:29227565..29229890 source=RiceIndica04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome04:29227565..29229890 source=RiceIndica04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGCGGGCGCGAGCTTCCTCTCGACCGTGCGGCAGCCTCCCGCGCCGCCGCCGCCGCTGCTCGCCCCACGCGGCTCCGCTTCCTCCGTCTCGTCTCCCGCGCGACGGCACGCCCACATTCTGGTGTGCTGCCATGCTACCGCGCAGGAAGAGCCTGTGCGATTCCGTAGAAGGGATTTAATCGGCGGCTGCTTGACTACTGCCATTGGCTTGGAATTAGTCGAGGGCTCTACAGGATTCACAGGAGTGGCTACTGCAGCTGATCTGATTGAGCGTCGACAACGCTCTGAATTCCAATCAAGCATCAAAAGCACCCTCGCCACAGCCATAACGGCTAAAAAAGAGCTCATTCCATCTTTGTTGACGTTGGCACTGAATGATGCCATGACATATGATAAGGCCACGAAGTCAGGAGGTCCAAATGGATCGGTCAGGCTAAGTGCAGAAATAAGCAGACCTGAAAACAGTGGACTTTCTGCTGCTGTGGATCTGCTAGTTGAAGCGAAAAAGGAGATAGATTCCTACTCCAAGGGAGGACCCATTGCATTTGCAGATCTGATCCAATTTGCAGCACAATCAGCACTCAAGCTAACATTCGTTGATGCGGCCATTGCCAAATGTGGCGGGAACGAAGAAAAAGGAAGAACACTATACTCAGCTTATGGTTCAAATGGCCAGTGGGGTTTATTCGACAAACTGTTCGGGCGACAAGATACACAGGAACCTGATCCTGAAGGAAGGGTACCTGACTGGAGCAAAGCTTCTGTGCAGGAAATGAAGGATAAGTTCGTCGCAGTTGGTTTGGGTCCTCGTCAGCTTGCTGTGATGTCAGTCTTCCTGGGGCCTGACCAAGCTGCCACGGAGGAACGGTTGATAGCCGACAAGGATTGCCGCCCATGGGTCGAGAAGTATCAACGCAGTCGCGAGACGGTCTCTCGAACTGACTACGAGGTTGACCTGATAACCACGCTCACAAAGCTGAGCTCCCTTGGGCAGAAGATAAACTACGAGGCCTACACGTACCCTAAGCAAAAGATTGACTTGGGTAAATTGAAATTGTGA</cdnaseq> |
| Protein Sequence |
<aaseq>MAGASFLSTVRQPPAPPPPLLAPRGSASSVSSPARRHAHILVCCHATAQEEPVRFRRRDLIGGCLTTAIGLELVEGSTGFTGVATAADLIERRQRSEFQSSIKSTLATAITAKKELIPSLLTLALNDAMTYDKATKSGGPNGSVRLSAEISRPENSGLSAAVDLLVEAKKEIDSYSKGGPIAFADLIQFAAQSALKLTFVDAAIAKCGGNEEKGRTLYSAYGSNGQWGLFDKLFGRQDTQEPDPEGRVPDWSKASVQEMKDKFVAVGLGPRQLAVMSVFLGPDQAATEERLIADKDCRPWVEKYQRSRETVSRTDYEVDLITTLTKLSSLGQKINYEAYTYPKQKIDLGKLKL</aaseq> |
| Gene Sequence |
<dnaseqindica>1..117#210..305#508..592#680..714#807..872#974..1014#1131..1261#1429..1535#1682..1819#1938..2072#2216..2326#ATGGCGGGCGCGAGCTTCCTCTCGACCGTGCGGCAGCCTCCCGCGCCGCCGCCGCCGCTGCTCGCCCCACGCGGCTCCGCTTCCTCCGTCTCGTCTCCCGCGCGACGGCACGCCCACGTATGTGCCCTGGAACTCGCGGGTGTAGTTTTGGTTTGGGCTAAAAATGCCGTGTGATTTGTGTAATCCTTGGGATTTTTTTTTCCGTGTAGATTCTGGTGTGCTGCCATGCTACCGCGCAGGAAGAGCCTGTGCGATTCCGTAGAAGGGATTTAATCGGCGGCTGCTTGACTACTGCCATTGGCTTGGTGCGTACCACTATTCTTCGTCCCTTTTGTTTGCGTGATCAGTGTAGTGTAGTCTTCTTATACTTTATTGGAGTAAGAAAGTGAATGAAATGTAGTATGGTGGGGGTAAAGAATATTAACCTGCAGTTAGTGCTTTTCCTTTTCCATGTTTAGTGTTGTTTTCAGAGGCGATAGGCTTAACTACTTCATGTCTTTTGATTAGGAATTAGTCGAGGGCTCTACAGGATTCACAGGAGTGGCTACTGCAGCTGATCTGATTGAGCGTCGACAACGCTCTGAATTCCAATGTAGGTCACCTCTAGCCGTTCCTTTTCCTTTGAATGCTATGTGCTTCTTTCCATGATAGTAATTCTTGCTTCCGTTTCTTTCTTCAGCAAGCATCAAAAGCACCCTCGCCACAGCCATAACGGTGAGATTGTATATTTTTTGCACTTCCTTAAGTCATTTTTACTTTGACCTATCTATCGATTTTTCCGGCTGAAATTTGATAACCCTTTGAAGGCTAAAAAAGAGCTCATTCCATCTTTGTTGACGTTGGCACTGAATGATGCCATGACATATGATAAGGTATGGTCTGGCTTCCTGAATTTACCGGCTGAACCCTCTGTCCATACATGGCACGCTTGGAAATAACCTGTGAAAAACGGCTATCCAACACTCTTTTTTAGGCCACGAAGTCAGGAGGTCCAAATGGATCGGTCAGGCTAAGGTAGTAGCTTCTGTTGGTACATATTTGTGTTGACGTTGCAAATATGCTCTTCAGATGAAAATCTAACAAGTTGCTCGGCCTCGTCATTCCTTCCTTTTCACCATTAAATAATAAAGTGCAGAAATAAGCAGACCTGAAAACAGTGGACTTTCTGCTGCTGTGGATCTGCTAGTTGAAGCGAAAAAGGAGATAGATTCCTACTCCAAGGGAGGACCCATTGCATTTGCAGATCTGATCCAATTTGCAGGTGTGACATACTTTGGACATAATTTTACTAGCACTTGTGTAATATTACCAAACTGGCTCTATTTTACCTTTGTTATTGTCAAGACCTCTTTTACAATAGTTGGAAAGGTACCAAGAAGTAATGGACATAGTAATAAACACCTCAAAATTTGCTTTCAATTGCAACAGCACAATCAGCACTCAAGCTAACATTCGTTGATGCGGCCATTGCCAAATGTGGCGGGAACGAAGAAAAAGGAAGAACACTATACTCAGCTTATGGTTCAAATGGCCAGGTATTCCCTATACCATGTCACTCCGTGTGTCAAATAACACTACACTATATGTTAAGTTTCTTCTGTCTGTCTGTATGGGCTTAGCTTACTAATTCAAGGTGCCATATATTTTTATGTTGATGCTTTGTTTGCATTTACCGCTGCAGTGGGGTTTATTCGACAAACTGTTCGGGCGACAAGATACACAGGAACCTGATCCTGAAGGAAGGGTACCTGACTGGAGCAAAGCTTCTGTGCAGGAAATGAAGGATAAGTTCGTCGCAGTTGGTTTGGGTCCTCGTCAGGTCACTAGCTACTGTCTTACATCGCTTAGCAAATTGTGTTACTGATCAATCATTTAATCTATAAGAAACTGTGATCCAGCAAACTTGTCTTTAAATATGAGATGATTTTGCATTTCAGCTTGCTGTGATGTCAGTCTTCCTGGGGCCTGACCAAGCTGCCACGGAGGAACGGTTGATAGCCGACAAGGATTGCCGCCCATGGGTCGAGAAGTATCAACGCAGTCGCGAGACGGTCTCTCGAACTGACTACGAGGTAAGATCATCTACCTCCGTCCCAAAACATCCGGATATATTGCTAAAAGTTGCTATATTCAAGATGGAGATTGTAACCATTCGTGCTGCAGGGTAACTCAGAACTCTTGTAGTGTTGATGCTGACATGTGTTTTGTATGTCAGGTTGACCTGATAACCACGCTCACAAAGCTGAGCTCCCTTGGGCAGAAGATAAACTACGAGGCCTACACGTACCCTAAGCAAAAGATTGACTTGGGTAAATTGAAATTGTGA</dnaseqindica> |
| External Link(s) |
