Difference between revisions of "BGIOSGA020022"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA020022| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020022, complete gene.| tag = OSJNBA0...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA020022|
 
GeneName = BGIOSGA020022|

Revision as of 16:28, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA020022

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020022, complete gene.

LocusTag

OSJNBA0052E20.3

Ensembl Transcript ID

BGIOSGA020022-TA

Ensembl Protein ID

BGIOSGA020022-PA

Length

2329

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24545100..24547428

Sequence Coding Region

24545100..24545624,24545728..24545891,24545977..24546627,24546732..24546849,24546946..24547134
,24547258..24547428

Genome Context

<gbrowseImage1> name=IndicaChromosome05:24545100..24547428 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:24545100..24547428 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCTTGCCCTGGTTGGCGACCCTTCGAATGGCGTGGCGAAGCCGTCGTGCGACTCCGTCGGCTCTCTGCCCGCCGTCAGCTCCAAGGCCGTCATCCACCCGCCGGTGACCAGCGCGGCGGGCGCCACGCTCGGCAGGCACCTCGCGAGGCGCCTCGTGCAGATCGGCGCCACCGACGTGTTCGCCGTCCCCGGGGACTTCAACCTCACCCTGCTCGACTACCTCATCGCCGAGCCCGGGCTCAAGCTCATCGGCTGCTGCAACGAGCTCAACGCCGGGTACGCGGCCGACGGCTACGCCCGCGCCCGCGGCGTCGGCGCGTGCGCCGTCACGTTCACCGTCGGTGGCCTCAGCGTGCTCAACGCCATCGCCGGCGCCTACAGCGAGAACCTCCCCGTGATCTGCATCGTCGGCGGGCCCAACTCCAACGACTACGGCACCAACCGCATCCTGCACCACACCATCGGCCTCCCGGACTTCTCACAGGAGCTCCGCTGCTTCCAGACCATCACCTGCTACCAGGCCGTCATTAACAACCTCGACGACGCGCACGAGCAGATCGACACCGCCATAGCGACGGCCCTAAGGGAGAGCAAGCCAGTGTACATCAGCGTGGGCTGCAACCTGGCGGGCCTCTCTCACCCGACGTTTAGCCGCGAGCCAGTGCCGTTGTTCATCTCGCCAAGATTGAGCAACAAGGCGAACTTGGAGCACGCCGTCGAAGCCGCGGCGGACTTCCTGAACAAGGCGGTGAAGCCGGTGATGGTCGGGGGGCCAAAGATCCGGGTGGCCAAGGCGAAGAAGGCGTTCGCCGGCATCGCGGAGTCGAGCGGGTACCCGTTCGCGGTGATGCCGTCCGCCAAGGGCCTCGTGCCGGAGCACCACCCGCGGTTCATCGGCACGTACTGGGGCGCCGTGAGCACCACCTTCTGCGCCGAGATCGTCGAGTCCGCCGACGCCTACCTCTTCGCCGGCCCGATCTTCAACGACTACAGCTCCGTCGGCTACTCCCTGCTGCTGAAGCGGGAGAAGGCCGTCATCGTGCAGCCCGACCGCGTGGTGGTCGGCAACGGCCCGGCGTTCGGCTGCATCCTCATGACTGAGTTCCTCGACGCGCTCGCCAAACGCCTCGACCGCAACACGACGGCGTACGACAACTACCGCCGCATCTTCATCCCCGACCGCGAGCCGCCCAATGGCCAGCCCGACGAGCCACTCAGGGTCAACATCCTCTTCAAGCACATCAAGGAGTTGCTGTCCGGCGACACCGCCGTCATCGCCGAGACCGGTGACTCGTGGTTCAACTGCCAGAAGCTCAGGCTCCCCGAGGGCTGCGGGTACGAGTTCCAGATGCAGTACGGCTCGATCGGGTGGTCCGTCGGCGCCACGCTCGGCTACGCCCAGGCGGCCAAGGACAAGCGCGTCATCTCCTGCATCGGCGACGGTAGCTTCCAGATGACGGCGCAGGACGTGTCGACGATGTTGCGGTGCGAGCAGAAGAGCATCATCTTCCTCATCAATAATGGTGGGTACACCATCGAGGTGGAGATCCACGACGGGCCGTACAACGTCATCAAGAACTGGGACTACACCGGCCTCATCGACGCCATCCACAACTCTGACGGCAACTGCTGGACAAAGAAGGTCCGGACTGAGGAGGAGCTGATAGAGGCGATCGCGACGGCAACGGGCGCCAAGAAAGACTGCCTCTGCTTCATCGAGATCATCGTGCACAAGGATGACACGAGCAAAGAGCTTCTCGAGTGGGGATCCAGGGTATCGGCTGCCAACAGCAGGCCGCCGAATCCCCAGTGA</cdnaseq>

Protein Sequence

<aaseq>MELALVGDPSNGVAKPSCDSVGSLPAVSSKAVIHPPVTSAAGATLGRHLARRLVQIGATDVFAVPGDFNLTLLDYLIAEPGLKLIGCCNELNAGYAADGYARARGVGACAVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTITCYQAVINNLDDAHEQIDTAIATALRESKPVYISVGCNLAGLSHPTFSREPVPLFISPRLSNKANLEHAVEAAADFLNKAVKPVMVGGPKIRVAKAKKAFAGIAESSGYPFAVMPSAKGLVPEHHPRFIGTYWGAVSTTFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKREKAVIVQPDRVVVGNGPAFGCILMTEFLDALAKRLDRNTTAYDNYRRIFIPDREPPNGQPDEPLRVNILFKHIKELLSGDTAVIAETGDSWFNCQKLRLPEGCGYEFQMQYGSIGWSVGATLGYAQAAKDKRVISCIGDGSFQMTAQDVSTMLRCEQKSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGLIDAIHNSDGNCWTKKVRTEEELIEAIATATGAKKDCLCFIEIIVHKDDTSKELLEWGSRVSAANSRPPNPQ</aaseq>

Gene Sequence

<dnaseqindica>1..525#629..792#878..1528#1633..1750#1847..2035#2159..2329#ATGGAGCTTGCCCTGGTTGGCGACCCTTCGAATGGCGTGGCGAAGCCGTCGTGCGACTCCGTCGGCTCTCTGCCCGCCGTCAGCTCCAAGGCCGTCATCCACCCGCCGGTGACCAGCGCGGCGGGCGCCACGCTCGGCAGGCACCTCGCGAGGCGCCTCGTGCAGATCGGCGCCACCGACGTGTTCGCCGTCCCCGGGGACTTCAACCTCACCCTGCTCGACTACCTCATCGCCGAGCCCGGGCTCAAGCTCATCGGCTGCTGCAACGAGCTCAACGCCGGGTACGCGGCCGACGGCTACGCCCGCGCCCGCGGCGTCGGCGCGTGCGCCGTCACGTTCACCGTCGGTGGCCTCAGCGTGCTCAACGCCATCGCCGGCGCCTACAGCGAGAACCTCCCCGTGATCTGCATCGTCGGCGGGCCCAACTCCAACGACTACGGCACCAACCGCATCCTGCACCACACCATCGGCCTCCCGGACTTCTCACAGGAGCTCCGCTGCTTCCAGACCATCACCTGCTACCAGGTCCGCGCAATGAGCCCTGCCCTCGTCTTTCTTTTGCACTGAGTGTCTTGCTGCATTTCGTCGAACACCTGAGCTGAACAGAGAGTGCGTTGCACGCATGCAGGCCGTCATTAACAACCTCGACGACGCGCACGAGCAGATCGACACCGCCATAGCGACGGCCCTAAGGGAGAGCAAGCCAGTGTACATCAGCGTGGGCTGCAACCTGGCGGGCCTCTCTCACCCGACGTTTAGCCGCGAGCCAGTGCCGTTGTTCATCTCGCCAAGGTAATACTGAGCTCAAAACGCATGCATCTTGTGTTAGAATCTTTTTTATCCATTAGTTTATTAATTTTGGTATCTGTTCCATTAGATTGAGCAACAAGGCGAACTTGGAGCACGCCGTCGAAGCCGCGGCGGACTTCCTGAACAAGGCGGTGAAGCCGGTGATGGTCGGGGGGCCAAAGATCCGGGTGGCCAAGGCGAAGAAGGCGTTCGCCGGCATCGCGGAGTCGAGCGGGTACCCGTTCGCGGTGATGCCGTCCGCCAAGGGCCTCGTGCCGGAGCACCACCCGCGGTTCATCGGCACGTACTGGGGCGCCGTGAGCACCACCTTCTGCGCCGAGATCGTCGAGTCCGCCGACGCCTACCTCTTCGCCGGCCCGATCTTCAACGACTACAGCTCCGTCGGCTACTCCCTGCTGCTGAAGCGGGAGAAGGCCGTCATCGTGCAGCCCGACCGCGTGGTGGTCGGCAACGGCCCGGCGTTCGGCTGCATCCTCATGACTGAGTTCCTCGACGCGCTCGCCAAACGCCTCGACCGCAACACGACGGCGTACGACAACTACCGCCGCATCTTCATCCCCGACCGCGAGCCGCCCAATGGCCAGCCCGACGAGCCACTCAGGGTCAACATCCTCTTCAAGCACATCAAGGAGTTGCTGTCCGGCGACACCGCCGTCATCGCCGAGACCGGTGACTCGTGGTTCAACTGCCAGAAGCTCAGGCTCCCCGAGGGCTGCGGGTAAACGCCACGCACACCGATCGTCTCCACGCCCCCGGCAACCTTCCACGCTTTCACCTCAGCTTCCCAAAATTCAATAACGAAAGGCTGGTCATTCCCAACAGGTACGAGTTCCAGATGCAGTACGGCTCGATCGGGTGGTCCGTCGGCGCCACGCTCGGCTACGCCCAGGCGGCCAAGGACAAGCGCGTCATCTCCTGCATCGGCGACGGTAGCTTCCAGGTGCGTCCTCTGCTGCTACGATCTCTGTTTTTCTCGCCAATGGCGGCGGCTGTAGCGCTGTACTAATGCAGTAATGCGGTTTCCCGCGACGTACAGATGACGGCGCAGGACGTGTCGACGATGTTGCGGTGCGAGCAGAAGAGCATCATCTTCCTCATCAATAATGGTGGGTACACCATCGAGGTGGAGATCCACGACGGGCCGTACAACGTCATCAAGAACTGGGACTACACCGGCCTCATCGACGCCATCCACAACTCTGACGGCAACTGCTGGACAAAGAAGGTTGGGTTCAAACACCACCACTACTAGTAACTACTGCTACTAGTAGTACTAAATACGGCTAAGTGCAATTGGACTGCTCGATCGTGACAGCTCAAAACCTTTTTTGCCGTTGTTTTTCAACAGGTCCGGACTGAGGAGGAGCTGATAGAGGCGATCGCGACGGCAACGGGCGCCAAGAAAGACTGCCTCTGCTTCATCGAGATCATCGTGCACAAGGATGACACGAGCAAAGAGCTTCTCGAGTGGGGATCCAGGGTATCGGCTGCCAACAGCAGGCCGCCGAATCCCCAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020022