Difference between revisions of "BGIOSGA020371"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA020371| Description = Putative uncharacterized proteinWRKY transcription| Definition = Oryza sativa Indica Group BGIOSGA020371, complete gen...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA020371|
 
GeneName = BGIOSGA020371|

Revision as of 16:30, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA020371

Description

Putative uncharacterized proteinWRKY transcription

Definition

Oryza sativa Indica Group BGIOSGA020371, complete gene.

LocusTag

OJ1781_H11.1

Ensembl Transcript ID

BGIOSGA020371-TA

Ensembl Protein ID

BGIOSGA020371-PA

Length

2920

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29485609..29488528

Sequence Coding Region

29485609..29486126,29487415..29487558,29487934..29488528

Genome Context

<gbrowseImage1> name=IndicaChromosome05:29485609..29488528 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:29485609..29488528 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGGCGGCGGCGGCGGCGGCGAGGGCTTCCCGTTCCACGACGAGCTGGCGTCGCTGTTCGCTGAGCGGCCGCCGAACGGCGCCATGCCGGGGATGCTGCAGCAGCAGCAGCCGTGGTCGTTCATCGACTACCACCACCACCTGATGCAGGAGAGCGCGCCGACGACGCCGCCGCTGGACTACGAGGCATTCGCCGGGGAGTTCGACGACGACGTGGCGCCTCTGGAGGAGGTGAAGAGGGAGCTGGTGGTGGACGGCGTCGGGTTGTTCCCTGGGGGTGGTGCTTCTGCTGCTGCGGCGGCGGCGGCGGTGGCGGGGCCGATGACTCCGAACAGCATGTCGGTGTCGTCGACGTCGAGCGAGGCGTGCGGCGTCGGCGGCGGCGCCGGAGGGGACGAGGAGTCGGCCGGGAAGTGCAAGAAGGAGGAGGAGGGGGACGGCGGCGACGACGACGGCAAGGAAGGATCGTCGACGACCAAGGGGGATGGCGATGGAGAAGACAAGAACAAGAAAGGAGGTAAGGGGAAGGGGAAGGGGGAGAAGAGGCCGCGGCAGCCGCGGTTCGCGTTCATGACCAAGAGCGAGGTCGACCACCTCGAGGATGGCTACCGGTGGCGCAAGTACGGCCAGAAAGCTGTCAAGAACAGCCCATTTCCCAGGAGCTACTACCGGTGCACGACGCAGAAGTGCCCGGTGAAGAAGAGGGTGGAGCGGTCGTACCAGGACGCGGCGGTGGTGATCACCACCTACGAGGGGAAGCACACGCACCCGATCCCGGCGACGCTGCGCGGCACGGCGCACCTCCTCGGCGCCGCCGCCGCCGCGCACCACCACGGCGGCCTCCAGTACCACCATCCCGGCCACTTCGCAGCTGCCGTCGGCCACCGTCTGCCTCCGCAGCCGCACGACGCGCTCGGCGGCGGCCTCCTGGCGCCGCCGCATGCGCAGCATCTCCATGCCATGCAGCACCAGATGCAGCTGGCGGCGGCGGCGGCGAGCGGCGGATCACTGCACGCCGCCGCCATGCAGCAGATGCCGCAGCCTGATCATGCTGGCTTGGCTGCCATCATCGCCTCTACCACCGGTGCTTCCACCACGCCGGCGCCGCCGCCGGCGACGGGGAGCGCTGCTGCTGCTGCTACTCCTCTCCGGATGCAGCACTTCATGGCGCAGGATTACGGCCTCCTGCAGGACATGTTCATCCCGTCGCCGTTCTTGCACAACGACGACGCCAACAACAACAACCACCGTTGA</cdnaseq>

Protein Sequence

<aaseq>MSGGGGGGEGFPFHDELASLFAERPPNGAMPGMLQQQQPWSFIDYHHHLMQESAPTTPPLDYEAFAGEFDDDVAPLEEVKRELVVDGVGLFPGGGASAAAAAAAVAGPMTPNSMSVSSTSSEACGVGGGAGGDEESAGKCKKEEEGDGGDDDGKEGSSTTKGDGDGEDKNKKGGKGKGKGEKRPRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTTQKCPVKKRVERSYQDAAVVITTYEGKHTHPIPATLRGTAHLLGAAAAAHHHGGLQYHHPGHFAAAVGHRLPPQPHDALGGGLLAPPHAQHLHAMQHQMQLAAAAASGGSLHAAAMQQMPQPDHAGLAAIIASTTGASTTPAPPPATGSAAAAATPLRMQHFMAQDYGLLQDMFIPSPFLHNDDANNNNHR</aaseq>

Gene Sequence

<dnaseqindica>1..518#1807..1950#2326..2920#ATGTCGGGCGGCGGCGGCGGCGGCGAGGGCTTCCCGTTCCACGACGAGCTGGCGTCGCTGTTCGCTGAGCGGCCGCCGAACGGCGCCATGCCGGGGATGCTGCAGCAGCAGCAGCCGTGGTCGTTCATCGACTACCACCACCACCTGATGCAGGAGAGCGCGCCGACGACGCCGCCGCTGGACTACGAGGCATTCGCCGGGGAGTTCGACGACGACGTGGCGCCTCTGGAGGAGGTGAAGAGGGAGCTGGTGGTGGACGGCGTCGGGTTGTTCCCTGGGGGTGGTGCTTCTGCTGCTGCGGCGGCGGCGGCGGTGGCGGGGCCGATGACTCCGAACAGCATGTCGGTGTCGTCGACGTCGAGCGAGGCGTGCGGCGTCGGCGGCGGCGCCGGAGGGGACGAGGAGTCGGCCGGGAAGTGCAAGAAGGAGGAGGAGGGGGACGGCGGCGACGACGACGGCAAGGAAGGATCGTCGACGACCAAGGGGGATGGCGATGGAGAAGACAAGAACAAGAAAGGGTGAGTTCTTTCATCTCATCTCATCTCATCTCATCCCATCCCATCTTGAACTGGATCTTGAAATTCATCCCATCTTGAACTGTATCTTGAAATTCATTTTGCTAGCTTTAGAAAGGTTGATTTGGCGAAGTCTTTGATTTTCTGTTCTGACTGGTGCTATTGGTGACATTAATGTGACAAAAAAAGATTAATAATCAGGAACAGGTTTTCTCTTTGTGTTCATGTTGATTTTTCTTCCGTCTGTTTCCTGAATGACTGTATCCAGATTTGAGCATGTTTAATTTTCTTCACGTTTTAATTTATTTCCTCTTTGGTTTGGTCAAGATGTGTGCATTTTGGCTCCTCTTTTGGTTTCGGTCAAGGACGTGTGAACTCGATGCGCTAGGGTTTCTCACTAGCTAGCACATGCTCGCCGAGCAATTAATACAAAACGAAAAGAGCTTGATCGTTAGGTAGTTTTTTTCTTTCAGAAAAAAGTTGATCAATGTTTTTTTGCTCACGCCTTTTGCTAGTCTTGGCATCACTTTCTTGATCTCTTCCTCTTGTCTTCATCTGATATCTCTTTGAGATATGCATGGTGCGTTCTTAGTTCGCAAGCATTATATTACGACACATACAATATATGAATTGCATTTAATTAGGATAATATATCACACCAGTCTGCAGATTCAGCCTATCAACTCAACTGATCGATCGATATCGATCAATCTCAGTTGGTGGCCAAGTTTTAAGTTTAACTGAACACATCGATCTATCGTTTTCATGGCAAACTTAATTTACCTTGCAACTTTAAACTCCTCGATTTTTGTTGCATCTGTAAATGTGACCCTGACCCCTCCTCCAAATTGTCTAGCTAGCAGTTAAATCACAAATTGATCAGTAGATCCTACCAAAATATATGACCAGGCCGTACATACGTACGCATGTATGTATGGCCGTGTGAACTCTGAAGTCGTCATGTGTAGATGCCCGCGCCGCCGTGCCGTCCATACGTACCTACGCGGCTACTACTACCCTCTGTACGCAGCCACTATGTTTGAATGGACCAACAACTGATCATCCATCGATTAGTATAATTAATCTCAATTTGCAGCTAATTAAGCTAGCTAGTATGAACATGATCTTGCTCGATCTATGGCACACACCAAAAATATGTAGCTTGTTGGGTAGTATAGTAGTACTGTCATTGAATTGACCTTGCTGTTTATTAGTTAGCATAGCTAGCTGATGTGTGATGAACTGATGACTGGATGAATTGATGTGAGTGAAAAAAAAATTTCATTTGCAGAGGTAAGGGGAAGGGGAAGGGGGAGAAGAGGCCGCGGCAGCCGCGGTTCGCGTTCATGACCAAGAGCGAGGTCGACCACCTCGAGGATGGCTACCGGTGGCGCAAGTACGGCCAGAAAGCTGTCAAGAACAGCCCATTTCCCAGGTACTTCGTTTTATATTATAAGTCGTTTTATTTTTTTAATTAAATTTTCTTAAGTTTGATCAAATTTATAGGAATATTTAGCAACGTCTATAGCACCAAATTAGCTTCATCAAAACTAGCATTTAAATTAATATGTTTGATAATACGTTTGTTTCGTGTTGAAAATTAATGTAGCTATATTTTTCTATAATAAACTCGATCAAACTTTTAAAAGTTTAATTAGAAAAAAAAGTTAAAATGATTTATAATATGAAATGGAATGAGTAAGAACTTAGTTATGAATCATGAATGCACTTGGTAGCTGAGATATATATGGATCATTGATAATTGATTAGGGTTCTTACGTTTGTGTGATGGATGGATGGATGGGTGCAGGAGCTACTACCGGTGCACGACGCAGAAGTGCCCGGTGAAGAAGAGGGTGGAGCGGTCGTACCAGGACGCGGCGGTGGTGATCACCACCTACGAGGGGAAGCACACGCACCCGATCCCGGCGACGCTGCGCGGCACGGCGCACCTCCTCGGCGCCGCCGCCGCCGCGCACCACCACGGCGGCCTCCAGTACCACCATCCCGGCCACTTCGCAGCTGCCGTCGGCCACCGTCTGCCTCCGCAGCCGCACGACGCGCTCGGCGGCGGCCTCCTGGCGCCGCCGCATGCGCAGCATCTCCATGCCATGCAGCACCAGATGCAGCTGGCGGCGGCGGCGGCGAGCGGCGGATCACTGCACGCCGCCGCCATGCAGCAGATGCCGCAGCCTGATCATGCTGGCTTGGCTGCCATCATCGCCTCTACCACCGGTGCTTCCACCACGCCGGCGCCGCCGCCGGCGACGGGGAGCGCTGCTGCTGCTGCTACTCCTCTCCGGATGCAGCACTTCATGGCGCAGGATTACGGCCTCCTGCAGGACATGTTCATCCCGTCGCCGTTCTTGCACAACGACGACGCCAACAACAACAACCACCGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020371