Difference between revisions of "BGIOSGA021986"

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(Created page with "{{IndicaGene| GeneName = BGIOSGA021986| Description = cDNA clone:J023049I19, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA021986, complete gene.| ta...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA021986|
 
GeneName = BGIOSGA021986|

Revision as of 16:39, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA021986

Description

cDNA clone:J023049I19, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA021986, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA021986-TA

Ensembl Protein ID

BGIOSGA021986-PA

Length

4629

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2068472..2073100

Sequence Coding Region

2072957..2073100,2072767..2072850),complement(2072593..2072688,2072440..2072510),complement(2071089..2071185
,2070708..2070833),complement(2070523..2070618,2069802..2069921),complement(2069648..2069725
,2069083..2069279),complement(2068866..2068959,2068692..2068781),complement(2068472..2068513

Genome Context

<gbrowseImage1> name=IndicaChromosome06:2068472..2073100 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:2068472..2073100 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACAACACCAAAATTTGACATGGTTCCAAAATGGTTAGCGACTGCTGTTTGGGATATTGTGTCAAAATATAAATCAACAATACCTGAATTTCCCCAGAAGGAGACATGTGAACTGCTCATTGTCGACAGGCCTATAGATCAGATAGCACCTGTTATTCATGAATGGACCTATGATGCAATGTGCCATGATCTACTTGAAATGGATGGCCAAAAATACATATATGAGGTGTCGAAAGCGGGATCAGAACCTGAGAGAAAGGAGGCTTTATTGGAGGATCATGATCCTCTCTGGGTTGAGCTTCGCCACATTCACATAGCTGATGCTAGTGAGAGGTTGTATGATAAGATGAATAACTTTGTTTCAAAGAATAAAGCAGCTCAACTTCATTCAAGAGATGGTGGTGAAATTTCTACAAAGGATCTGCAGAAGATCGTTCAAGCTTTGCCACAATACGGTGAACAAGTTGAGAAATTGACCCTCCATATAGAGATTGCTGGAAAAATCAACAAGTTTATCAGAGAGTATGGTCTCCGTGACATTGGGCAGGTGGAGCAGGATCTAGTTTTTGGAGATGCAGCAGCCAAGGAGGTGATCAGTATCCTCAGGTCAAAGCAGGATATGAGCCCAGAAAACAAATTGAGGTTGCTTATTATATATGCAATTGTATATCCAGAGAAGTTTGAAGGTGACAAAGGGGAAAAGTTGATGCAGCTAGCAAAACTGCCACATGATGAGATGGATGCCATAAATAGTTTAAGATACTTGGTTGGTTCAGATACAAAAAAGGCATCACGGCCTGGCGGCTTCTCTCTCAAATTTGATGCACAAAAGAAAAAAAATGCTGCGAGGACAGAACGGCAGGATGGCGATGAAACCTGGGCATTATCACGTTTTTTCCCACTTATAGAGGAGTTGATTGAGAAACTGAGCAAAGGTGCATTACCTTTGAATGAATACCCATCCATGAGTGAACCCAGTTCCACTGAACAAGGATCTACACAAAGTGCAGCCGCGACTAAACCAGCACAAGCACAACCCATGTCCAGGAGATCGCGGCGGACACCAACCTGGGCTAAGTCTCGAAACTCTGATGATAGTCAATCAAGTGACTCCTCGGTCTTGAGACATGGATCTAATGACTTCAAGAGGCTAGGCAACCGAATTTTTGTCTTCATGATTGGTGGAGCCACTAGATCGGAACTGCGGACGGTGCACAAGCTTACTATGAAACTGAAGCGCGAAATTGTCCTGGGATCTTCTAGCATAGATGACCCTCCACAATTTATTTCGAAGCTGAAGATGCTAACTGCAGGTGGTGCCAATGACGTCTAA</cdnaseq>

Protein Sequence

<aaseq>MTTPKFDMVPKWLATAVWDIVSKYKSTIPEFPQKETCELLIVDRPIDQIAPVIHEWTYDAMCHDLLEMDGQKYIYEVSKAGSEPERKEALLEDHDPLWVELRHIHIADASERLYDKMNNFVSKNKAAQLHSRDGGEISTKDLQKIVQALPQYGEQVEKLTLHIEIAGKINKFIREYGLRDIGQVEQDLVFGDAAAKEVISILRSKQDMSPENKLRLLIIYAIVYPEKFEGDKGEKLMQLAKLPHDEMDAINSLRYLVGSDTKKASRPGGFSLKFDAQKKKNAARTERQDGDETWALSRFFPLIEELIEKLSKGALPLNEYPSMSEPSSTEQGSTQSAAATKPAQAQPMSRRSRRTPTWAKSRNSDDSQSSDSSVLRHGSNDFKRLGNRIFVFMIGGATRSELRTVHKLTMKLKREIVLGSSSIDDPPQFISKLKMLTAGGANDV</aaseq>

Gene Sequence

<dnaseqindica>1..144#251..334#413..508#591..661#1916..2012#2268..2393#2483..2578#3180..3299#3376..3453#3822..4018#4142..4235#4320..4409#4588..4629#ATGACAACACCAAAATTTGACATGGTTCCAAAATGGTTAGCGACTGCTGTTTGGGATATTGTGTCAAAATATAAATCAACAATACCTGAATTTCCCCAGAAGGAGACATGTGAACTGCTCATTGTCGACAGGCCTATAGATCAGGTGCTGAAGGATAACTTATGTTTCAATAACTTGTCAGTGTAGAAGTATATTGAAGAAATTCAGTATCTTTCCTACTGCTTACAATAATTTCCGTATGTCTGCAAAGATAGCACCTGTTATTCATGAATGGACCTATGATGCAATGTGCCATGATCTACTTGAAATGGATGGCCAAAAATACATATATGAGGTAAATGTGATATCGTATTATAATAATGAACATGATCTGTTCACTTGCCCTATTCTTATGTTTAATTTCTGTTGGAAGGTGTCGAAAGCGGGATCAGAACCTGAGAGAAAGGAGGCTTTATTGGAGGATCATGATCCTCTCTGGGTTGAGCTTCGCCACATTCACATAGCTGATGTGAGTTATGTGTTGTACTGTTGTTTAAGATTGTTTTAAGTACAATTTGGTCTCTGCTTTCTAACACTAATTGAAATGGCAGGCTAGTGAGAGGTTGTATGATAAGATGAATAACTTTGTTTCAAAGAATAAAGCAGCTCAACTTCATTCAAGGTGCATGATCTTCCTCGGTTTAGAGGAACACAACTGTAAATGTTTTAATAGAGTCGAATACAATATGCCATTTGAACAATGCTACTCCATTGGTGTCGTTTACCGTTCTAGTTTACTGATGGCAGTCATGTTTTGTATCAGCTCTTGGATATCCATTATGCTAGGTACTTATCTGCAACAGAATTTGTTGCAGTGTAAACACAATTTGATCTACATCTTTACTAAGTTACTGGCATATGGCATTATTTTTTGAACGACTGATTTAGTTTGGATATGAACTGTAACTCTGATAGACAAGTATTACTGGAATCCTTACAATTCGAAGGAAACAAAGTAGAGTAAATTCCCTGTGTACCCCTGAAAACTCACTCAATCCCTTTCATACCCCTAAAATTTACCCGATCCCTTCTGTACCCCTGAAATTTCAATTTGATCCCTTCCATGCCCCTACCGTTACATTTTCCATCATTTTACTGTTACGTTTGGTTGCAAATGTCTTTTTTGCCCTTGATGCTTTAGGTTTAAATATAAGCTTCAAAAATAATTGAAAATTTTGTTTGAGTGCACATCGTGTGCATTTTATAAAACTAATGAGACTAAATAATTAGTGCAGAAAATTTTGACATAAATTTTGAAAATAAAATAAATGTAAAAAATTAAAATTTTTATTTGAAATTTTAATAGGACAATGGATTTTTTTATCAGGAGCATTCATAAAAAAAAATGTTGTGAACATTGGTATACCTATCTTTATATGAATGCTCCTCATTTTTATGACCTTTTTTTTAAAAAATAAATACGTATTTTTTTTATTTCATTATCTAAAAATATTTTTTTGGGATAAATAATGCATCGCACAACAAACTCATAACTATAATAGTCTCATGCGAGAAGCTTTTATATTTTTAATAATGTAATTCATGAATTTCTTTGTTCATCCAAGGGTAAAATGGTCATTTTTATAGAAAATACACGGTCAACTAACGGTCAACTGACGGGAGGGGTATGCAAGGGATCAAAATCAAATTTTGGGGGTATATAAGGAAGTAAGCAAAATTCAGGGGTATAGAAGGGATTAGGAAAAATTTCAGGGGTATATAAGGGATTTTCTCAACAAAGTAAGCTGTGGTTTGTAGTTTGATGTCAAGGTTACATCAAATGTTGATCGATCAGTTGTTTGCTAGCCAAAGTACAGAAAGTGCATTGTTCTAAGTTCTTTCATATTGCATGCTTATGATTCCCTTTCTCAATTAGAGATGGTGGTGAAATTTCTACAAAGGATCTGCAGAAGATCGTTCAAGCTTTGCCACAATACGGTGAACAAGTTGAGAAATTGACCCTCCATATAGAGGTAGATGATTATTTCCATAGTATTTCCTGTGCGTGCTTTATGTTATTTTGTTTACCCTTACAAATAAGTTCGGGATTTCTAGGAACTATCAAGTAAATGTGAAAAGAAGCAGCTATTGTTTAGAAAAACATGTTGACTGTTGTCACCTTAATACATACTTATATGTTCATCCTTGATTTATGATTTTTTTTACAACTTCTATCTTATCATCAAAATAATAAAAAATGTAATACTCACTATTGAACTTTTATTCAGATTGCTGGAAAAATCAACAAGTTTATCAGAGAGTATGGTCTCCGTGACATTGGGCAGGTGGAGCAGGATCTAGTTTTTGGAGATGCAGCAGCCAAGGAGGTGATCAGTATCCTCAGGTCAAAGCAGGTTTGTTAAGAAAGAGAGAATGAAAGCAGTCTTACTGCTAATTATTTGTCAGTTTTTATTCAATGCTTACTGAACTTTCTATTGTTCAGGATATGAGCCCAGAAAACAAATTGAGGTTGCTTATTATATATGCAATTGTATATCCAGAGAAGTTTGAAGGTGACAAAGGGGAAAAGTTGATGCAGGTATTTCCTATCAAGTTTTACATTACTTATTAGTGCAATTATTACATTAATCTGTCACAACCCGAGGACATGACGGGATAAACACCGTCGGGTGGATAGATGCGTGGAAGCGGCTGCTGCTGCTAGGGGTGAGAGGTAGATTTAGGTTGGTAGGACATTGAGAGGGATTAGATTGGATTAATCTGATTTATCACTTAATTCATAATTGCATAGGATACAATCCATCCTTATATAGATGGGACGACTTAACCCCTAAGAATGGACTCAATCTAATCTTACCTAACGAACTACTACAGTAGCGTGCTACCCAGAGGGTGTTGGGATGACCACTGGCCTCAGCCTCTCAGCCCAATTACCCATGACATAATCATACATAAACACAGTTTCGGATTTTGCTTGTTATAAGCGTGGAAGTATAGATTACCAGGTTGACTATTATCATTGTTCAATGGTTTCCTTGAGTGCTTCTATAGTGCTATTCGGAGTGTTTACTAAAGAAAATGTGACACAGAGGGTTCTATTAGTTGGTTTTGGGGGGTACAATTGCATGCAGTTGATTATATAAACATATGACATTTTGAACAAACTTTCATTTATGCAGCTAGCAAAACTGCCACATGATGAGATGGATGCCATAAATAGTTTAAGATACTTGGTTGGTTCAGATACAAAAAAGGCATCACGGCCTGGCGGCTTCTCTCTCAAATTTGATGCACAAAAGGTGAGGTCATGATTTGAGCTAAATTATTTCTACCTTCTTCCCTTGAACTAACATGTGTGCTTGACTTATATACCAGAAAAAAAATGCTGCGAGGACAGAACGGCAGGATGGCGATGAAACCTGGGCATTATCACGTTTTTTCCCACTTATAGAGGCATGTGGTATAACTATTACTACTAGTTTACTTCTAAACTTCCTGCATCAAATATCTCCTTGGCTAATTTATTTCTGTGTGCTTAGTACAATTAAGAATATTTTCTTATGAAATTCTATTATTCACCTTTTCTGAAACCAACATATAGCAAATTTCTAAATATGGGAACTTCAAGAATGTGGTTCACATTCTGTTAATAAAATCCGGTTCGTAATAAACTGAACTGGATAATAACAAACATAGTGGCAATGATTTTTGGTGATGCCTGTTGGATAATACTTTTGTTGAGTGGTTATATACAAATCGTACTTAAAATAATGGTTCTTATTCGTTGTTTAAATTAAGGACTTGCATTCATTCTCTAACAGGAGTTGATTGAGAAACTGAGCAAAGGTGCATTACCTTTGAATGAATACCCATCCATGAGTGAACCCAGTTCCACTGAACAAGGATCTACACAAAGTGCAGCCGCGACTAAACCAGCACAAGCACAACCCATGTCCAGGAGATCGCGGCGGACACCAACCTGGGCTAAGTCTCGAAACTCTGATGATAGTCAATCAAGGTATTCAACAAATATAATTTTCTATTTGAACCACTTATCCATATAAAAGTTTTTCTAGTAAAAGTGTTATATCAGCTTCATACCTTTTACCTGCTTTCTTATCATCACAAACTGGATTGGCAGTGACTCCTCGGTCTTGAGACATGGATCTAATGACTTCAAGAGGCTAGGCAACCGAATTTTTGTCTTCATGATTGGTGGAGCCACTAGATCGGAAGTAAGCCATTTACTGCAAACTATTTAATAACTCAAATCCCATTCTGTTTATGTGGTCATCAATTCTTACACTTAAATGGATCAGCTGCGGACGGTGCACAAGCTTACTATGAAACTGAAGCGCGAAATTGTCCTGGGATCTTCTAGCATAGATGACCCTCCACAATTTATTTCGGTAAACCCATCCTGTACAACACAATAATGTATTCGAATTTCTTTCTTTTACCATTATCATGCAATCCTGTTGCGGCAAATAGAAGTTTCTTGGATTATACTGTTACATTAGTTTTAAATGTGGAATTGCCAGGCGATATTTGACCAATTGTACTCATTGTTTGAATTCAAAAATGCAGAAGCTGAAGATGCTAACTGCAGGTGGTGCCAATGACGTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021986