Difference between revisions of "BGIOSGA029490"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA029490| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029490, complete gene.| tag = OS09G05...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA029490|
 
GeneName = BGIOSGA029490|

Revision as of 17:18, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA029490

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029490, complete gene.

LocusTag

OS09G0502600

Ensembl Transcript ID

BGIOSGA029490-TA

Ensembl Protein ID

BGIOSGA029490-PA

Length

2186

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:18087002..18089187

Sequence Coding Region

18089115..18089187,18088704..18088813,18087493..18088311,18087233..18087385,18087002..18087139

Genome Context

<gbrowseImage1> name=IndicaChromosome09:18087002..18089187 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:18087002..18089187 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCCTGCTCGCGCTGAACCGGCTCATCTCCATCCGGCGGGAGCGCCGTCGCCGGCGAAACAAAGCCCGCAAAGGAGGATCAATTACTAAATCGGTGAGAAGGAAGTACTCACCCTGCCAACAAGATGATGATTCCCAGGGTGGTAAAATGATGACAAATTCAGGGATAACTCTTCCAGAGGACATCTGGAGTTATATACTTTCCCTGATGCCAATGCGAGATGCTGCCCGTGCTGCATGTTTGTCTCGTGCCATCCTACGATCCTGGAGATGTCATCCCAACCTCACCTTTAACGAAGATGCACTAGGATTGAATGATAATGCTTGTGAAACAGATTTCACCAGCAAAGTTGACCACATCCTTAAAAACCACTCGGGCATTGGTGTGAAGAGATTCAAGCTTTCAGTCAACTGCAAGTTAGATAACTGTGATTATGTCGATAGTTGGCTTCAGTTTGCCATTACACCAGGGATTGAAGAAATCACAGTTATGCTGTCTGGAAACAAGCCACAGTTCAACTTCCCATGCTCACTTTTCTCTGACAAGATTGCATACTCAATTCGGTGTCTTGAGCTTGGCAATTGTGCCTTTCATCCCACAATTGAACTTGGCCCATTAAGAAACCTCAAAAGGCTGCATCTGTCTTGTGTTCGTATTTCAGGGGATGAGTTAGCATGCCTCCTTTCCAACTCGTTTGTTTTGGAGCAGTTGGAACTCAAGTACTGCAAAAAGATAGTCAGCCTTAAGATGCCTTGTGTGCTGCAGCGGCTTAACTGCCTGAACGTTTTGGAATGCAAGAGGGTTCAGGTGATAGAGAGCAAAGCCCCTAACCTCTCCAGTTTTTCCTTTAGTGGAAACAAGGTAAAACTCTCACTTGTGGAATCATCACAAGTGAAGAATCTATACATGTGCAGTTCAAACATCATATGTTATGCTCGTTCAGATCTTCCATCCATTGTGCCAAATGTTGAAACTCTTGCCGTAGCTTCACACTGCGAGATGGTCGACACACCAATGCTACCAACCAAACTTCTGTACCTCAAGCATCTGACTATTTCTCTTTTTGCATGGACCTTTTCTCGAGCCTATGACTATTTTTCTCTGGTTTCATTTTTTGATGCTTCTCCTTTGTTGGAGGTATTCGTCTTGGATATATATCAGGAAAGCATGGAGCATGAATCAATCTTTGAGAGTTCCTCACATCTAAGACAGATGCCAGAATATCACCATGAACACCTCAAGTCCGTGACGATCAGCGGCTTTGCTCCGCGAAGAGCTTGGTCGAGCTAG</cdnaseq>

Protein Sequence

<aaseq>MALLALNRLISIRRERRRRRNKARKGGSITKSVRRKYSPCQQDDDSQGGKMMTNSGITLPEDIWSYILSLMPMRDAARAACLSRAILRSWRCHPNLTFNEDALGLNDNACETDFTSKVDHILKNHSGIGVKRFKLSVNCKLDNCDYVDSWLQFAITPGIEEITVMLSGNKPQFNFPCSLFSDKIAYSIRCLELGNCAFHPTIELGPLRNLKRLHLSCVRISGDELACLLSNSFVLEQLELKYCKKIVSLKMPCVLQRLNCLNVLECKRVQVIESKAPNLSSFSFSGNKVKLSLVESSQVKNLYMCSSNIICYARSDLPSIVPNVETLAVASHCEMVDTPMLPTKLLYLKHLTISLFAWTFSRAYDYFSLVSFFDASPLLEVFVLDIYQESMEHESIFESSSHLRQMPEYHHEHLKSVTISGFAPRRAWSS</aaseq>

Gene Sequence

<dnaseqindica>1..73#375..484#877..1695#1803..1955#2049..2186#ATGGCCCTGCTCGCGCTGAACCGGCTCATCTCCATCCGGCGGGAGCGCCGTCGCCGGCGAAACAAAGCCCGCAGTAAGCGCTTTCCCCTCGGCCTCTCTGCACTTCATCTCTCCGGTGCGTTGTGTGTGATGTGCTGCTCGGACTTTTTTTGGGAGATTGCGGCCAGTATTTTTCCAGAATGGAAAATTGGATTGGTTTGGTGAATTGTTTCTCTAAAATTGGAAGAATTTGGTTTGGTGAATTCATCAGCATTCTCGCTCAAAAGTTGGATAAGGAAACATTTTGGATTTCTATATGACTCGTTTGTGAGGTTGAATCTGTTGTTCTCTTCTGTTAATGTCTGAAATTATCTATTACAATGCATGATATGCAGAAGGAGGATCAATTACTAAATCGGTGAGAAGGAAGTACTCACCCTGCCAACAAGATGATGATTCCCAGGGTGGTAAAATGATGACAAATTCAGGGATAACTCTTCCAGAGGTACTGCACTGCATACACTGTTTTTTTTAAAAAAAAAAATCTATGAATTAATTGGAACATTTCAAAATACTACTATGCATTCCATTCTTAAGTATGTGCCCTTGCTAGTGTCCTTTTAAGACTCTAAAGAGGACCAGAGACCTACCTAAACTATATTAAACTACCAACACTGTTAAAGGAAAACAGCTCTACGCAATGCTTAATTTATGCGCCATTCTAATGCACAACATGCCTATCTAATGCAACGCACCTTGAGAAATCACGTGCAGTACTCCTGGGGTTGAAAAAAAATGATACGCCATATGGTTCTATTCATGTTTCTCTCTAATCAAAGTAGCCATTTAGGTTTATAATTGCAATGTTGAAATGTTATCCCATGATGGTGTCTGCAGGACATCTGGAGTTATATACTTTCCCTGATGCCAATGCGAGATGCTGCCCGTGCTGCATGTTTGTCTCGTGCCATCCTACGATCCTGGAGATGTCATCCCAACCTCACCTTTAACGAAGATGCACTAGGATTGAATGATAATGCTTGTGAAACAGATTTCACCAGCAAAGTTGACCACATCCTTAAAAACCACTCGGGCATTGGTGTGAAGAGATTCAAGCTTTCAGTCAACTGCAAGTTAGATAACTGTGATTATGTCGATAGTTGGCTTCAGTTTGCCATTACACCAGGGATTGAAGAAATCACAGTTATGCTGTCTGGAAACAAGCCACAGTTCAACTTCCCATGCTCACTTTTCTCTGACAAGATTGCATACTCAATTCGGTGTCTTGAGCTTGGCAATTGTGCCTTTCATCCCACAATTGAACTTGGCCCATTAAGAAACCTCAAAAGGCTGCATCTGTCTTGTGTTCGTATTTCAGGGGATGAGTTAGCATGCCTCCTTTCCAACTCGTTTGTTTTGGAGCAGTTGGAACTCAAGTACTGCAAAAAGATAGTCAGCCTTAAGATGCCTTGTGTGCTGCAGCGGCTTAACTGCCTGAACGTTTTGGAATGCAAGAGGGTTCAGGTGATAGAGAGCAAAGCCCCTAACCTCTCCAGTTTTTCCTTTAGTGGAAACAAGGTAAAACTCTCACTTGTGGAATCATCACAAGTGAAGAATCTATACATGTGCAGTTCAAACATCATATGTTATGCTCGTTCAGATCTTCCATCCATTGTGCCAAATGTTGAAACTCTTGCCGTAGCTTCACACTGCGAGGTATAAACTAAACTTTCATTATTATAGACTATGCCAAAATGTACCAGTATAATAACATGGGTTATACCTTTTNTTAGAGTGACTATTCTGAGATATCTTATATGCAGATGGTCGACACACCAATGCTACCAACCAAACTTCTGTACCTCAAGCATCTGACTATTTCTCTTTTTGCATGGACCTTTTCTCGAGCCTATGACTATTTTTCTCTGGTTTCATTTTTTGATGCTTCTCCTTTGTTGGAGGTATTCGTCTTGGATGTAAGGCTCTGTGCAACGTTCCCTTCATCCACAAAAATATATGTTACCACGGTAGAAGTACTGATTCAAGTATATGTCTTTTTTCATCTTCAGATATATCAGGAAAGCATGGAGCATGAATCAATCTTTGAGAGTTCCTCACATCTAAGACAGATGCCAGAATATCACCATGAACACCTCAAGTCCGTGACGATCAGCGGCTTTGCTCCGCGAAGAGCTTGGTCGAGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029490