Difference between revisions of "BGIOSGA031124"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA031124| Description = cDNA clone:J033046E14, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA031124, complete gene.| ta...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA031124|
 
GeneName = BGIOSGA031124|

Revision as of 17:26, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA031124

Description

cDNA clone:J033046E14, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA031124, complete gene.

LocusTag

OJ1439_F07.25

Ensembl Transcript ID

BGIOSGA031124-TA

Ensembl Protein ID

BGIOSGA031124-PA

Length

3323

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19411041..19414363

Sequence Coding Region

19411041..19411263,19413101..19413177,19413248..19413410,19413537..19413598,19413692..19413770
,19414260..19414363

Genome Context

<gbrowseImage1> name=IndicaChromosome09:19411041..19414363 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:19411041..19414363 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCCGAGAGCTACTGGCAGTACCAGTACGCCGCCGTCGACCCGCGCCAGCAGGCGCCGGCGCCGGTGCCTGTGCCCACGCCCGCGCTCATGTGGCAGCAGCAGCAGCAGCAGGCGGGGTATCAGCCCGCCGTGGCGCCGGTCGCGCCCCCGATGGCTGCTCCGCCACTGCCCGCCGGCCCCCCGCCGTCGTTCAAGCGCCAGCGCCCGGAGTACTTCGACATGCCTTCTGGACAGGGAAACAGCCTCTTCCACGAAGCAATGAGCCCCCATTATGTCCATCGCTTGAACAATCAGATGTCCTATGCTGCTGGTGCTAACCAAAGTGCTATTCCACTTGGTGGGATGGCCACATATTCAGCAGGCATGGACAGTGGAAACCATGGCGCTACAATAACTGAATCAAGAACTCTCTATGTGGAAGGACTACCTTCGAACTGCACAAAGAGAGAGGTTGCACATATCTTTCGCCCCTTTTCTGGTTTCCGTGAGGTGAGATTGGTCAACAAGGAGATTAGGCATGCTGGAAGCTGTAACCTCTTGTGTTTTGTTGATTTTTCATCTCCTCCTGAAGCTCGTGCTGCTCTGGAGACTCTGCAAGGCTATAAGTTTGATGAACATGACCATGAGTCTTCCAACCTGCGCATACAATTCTCTCTCACTCCTCGCAGGAGGCCAATTGGTGGGCCTCGTGTTAGAAACTAA</cdnaseq>

Protein Sequence

<aaseq>MAAESYWQYQYAAVDPRQQAPAPVPVPTPALMWQQQQQQAGYQPAVAPVAPPMAAPPLPAGPPPSFKRQRPEYFDMPSGQGNSLFHEAMSPHYVHRLNNQMSYAAGANQSAIPLGGMATYSAGMDSGNHGATITESRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKEIRHAGSCNLLCFVDFSSPPEARAALETLQGYKFDEHDHESSNLRIQFSLTPRRRPIGGPRVRN</aaseq>

Gene Sequence

<dnaseqindica>1..223#2061..2137#2208..2370#2497..2558#2652..2730#3220..3323#ATGGCCGCCGAGAGCTACTGGCAGTACCAGTACGCCGCCGTCGACCCGCGCCAGCAGGCGCCGGCGCCGGTGCCTGTGCCCACGCCCGCGCTCATGTGGCAGCAGCAGCAGCAGCAGGCGGGGTATCAGCCCGCCGTGGCGCCGGTCGCGCCCCCGATGGCTGCTCCGCCACTGCCCGCCGGCCCCCCGCCGTCGTTCAAGCGCCAGCGCCCGGAGTACTTCGGTTCGTGCTCGCCCACACATTCCTCCTCTTCTTGATTGTTAATTTTGTGTTGCCTGCTAGATTAGTCGTAAGAAAGTATAGGTAGCTTTGTTGTGGGTATCCATGGGGTTTAGGGCTTTAGGCTATAGAACATATAGATGATGATAGTGGAAGCTAGTCTTTTTTTATAAGCAGATCTTGTTGTCCTGAACTTTTGGGGTTCAGGGCGAGAAAAAATCAGAGGCCTTTTATTTGAATGTATCATCATCAGTAATCTTAATAAATTGCAAATATCCCTCATGTTTGAATTACAGATCCAGATATTATCAGTTATAAGTCTGAAACTCTGAATAATAGGGAGCAGAATCACCTGGATTTTTGTGATCTTGTAGAAACCGAAATATCATCAAGAACTCGTGGAAGCCAATCTCCTCAAGGGTATAATCTGTTAGAGGACTCCTAAAAAGGGAAAACACACACACACACCAACTATAGAAAATCAGTGCAAAGCTATGAGATAAACCAACCAACCACTCAACTCAAGGAGATCTTGCTGACTAACTAGAGAAACTAATTATTATGAACAACTCACAGGAATGAGGAATTCATAACCAATCAACTCTAATGGCAATCTTTAGAACCAAAAGAAATCAAAGTTCCATCTTTTTTTTGTCAATCTTCTTTGGGGTGTTATTCAACCCTGAAGCAAAGGAGTGAGATCTAAAAAACTTAAAGAGTACGACATATGCAGTGGCTGAATGACGGGATTACATGCAGCAAATGACACACTTAATTAGGCTTTAGTCATGCTAGCTAACCCAGCGTAGTTTCGGGAATAGATAAGGGTCGAGGGGAATGAGATAGCTTCGATGCTTCGTGACCTGCGCAGACTGATATGCTTGTTGGACATCTGCTAATGAGGCTTGGGCTTCCAAACAATACGTGTGTGGTCTGGGGCCCTGACTGCCCTGACTCAGGGCCGGCCTTGTGTTTTCCCTGCCACGCTGTACTATTAACCTGTCCAAGGAAATGGTAGGAGAAGTTGCAGGCTTGTAGTTTTGAATTGTTCCAATGGTAGATGTTTGTTTGAAATGAATACATAAAAATGAAACCATTCCTCATTTCCTGATAAAGCCTCAATGTCGTAAGATGGGAACTAGTAATTTTCATATGTGAATCTACAAGATCATATTGATTCTTTGTTTTCTTTAAAGTTAGATGGTGTAGCATGGTTTATATGATATGTTAGATTGAATTAATCTCTGGTTAGGCTAATATTTCACTATCATTGGTAGGCTCTAGGCAAAAGGTTTCGGCTTCTATTATAGAGTAGTCGGTCTGACTATTTTGATGGCTAAATGGTTTGTAAATTCTGAAATCTAAAACAAGAGAAAAAAAAAGGAATTTGTTGTGTAAAAAGGTTCTAATAATCTCTACAAAGGAATTTGCTGCTTGCATGCCGTTACGTTGTTTGCCGCCAATTCTGAATGCATCTATCATCACAACAATAAAGTTTAGTCCTTTTTTAGTATCATTTTATTGGGAAAATGATTGCTTGCTATGCACAGCTACCTGAAACTATGTATCAGGATTGCCTACCTGCACATAGATTTGGCGGCTTTTTAGTTGTTAGATAATGTTGTAATTACCGCACATCATTAATTCTTCACATGTTTGCTTCTATTGCAAGCCCATTTTTGTCATAGCTTGCTTCTTAAATGGACAGGGAAAAAATATTGACGAGACTGTTCAGTAGTTTCTTCCTAATGTATTTTCTCCAAGTGAGATGTTCATTTGTTTCAGTCAAAAAAAAAAGATGTGCATTTGTATATTTTAACACTTTACACTTTGTTTGCAGACATGCCTTCTGGACAGGGAAACAGCCTCTTCCACGAAGCAATGAGCCCCCATTATGTCCATCGCTTGAACAATCAGGTATTATATCAATTATAAGCTTGTTAATTTGAGGATAGCAACTTTCTTACTAACATAGTGCTGGTTGCAGATGTCCTATGCTGCTGGTGCTAACCAAAGTGCTATTCCACTTGGTGGGATGGCCACATATTCAGCAGGCATGGACAGTGGAAACCATGGCGCTACAATAACTGAATCAAGAACTCTCTATGTGGAAGGACTACCTTCGAACTGCACAAAGAGAGAGGTTGCACGTATCCTTTTCTATGCTTGTAAACTAAAATCACATTTTCCTAGCTATAATTAGTGTAGGTATCTTTTGCGATGTAATTCATATTACACCTCCTAGGTGCTTTTGCCCTTAACTCTTTCTTCTGCAGATATCTTTCGCCCCTTTTCTGGTTTCCGTGAGGTGAGATTGGTCAACAAGGAGATTAGGCATGTAAGTTAAATGCTACCTGTGAACCAAATTTTCCCTGTTATTTTTTGCAAAGCCAAGCATGCTTACATGTCAAATCCCCTCTCTGTTTTGCAGGCTGGAAGCTGTAACCTCTTGTGTTTTGTTGATTTTTCATCTCCTCCTGAAGCTCGTGCTGCTCTGGAGACTCTGCAAGGTAATTATAACATCATATTTTCTGCATCCATATGCATTGTAGTTATGTTGCCAATTTCGTTAGATAGTGCTTGCGCGCAGTTTCATTCTTTTATGTTTGTGTGCCTTTAGTCTTATTAAAAATCTGTTTATTTTTCTTAATATTTTTCCCTTTGTCCCACATCCAGTAGGTTTTAGTGTGATGACTGAACTATGTAGAGTGTAGTCCATAGATAACTAAACTAAGATTATTATTATTTTTTTGCTGAAAACTAAGATTGTTATTTCGAAATATCATAATTTTTCCTTGTTCCACTTTGAAACCAGCTTACTGTCATTCTATGTGTGCTATATCATATGTAATAATATTTGTGTGCACATCAACTTTAGTGCTTTCCATCATAAAACTAGACGTTTCATTGGTAGGGAGAGAATAAACTTTGAGCTTCTAATACTTGTTCAGGTTATAAGCTTGAATTTGGCTCTGAAACTATGACGTTTTGCTTTGCAGGCTATAAGTTTGATGAACATGACCATGAGTCTTCCAACCTGCGCATACAATTCTCTCTCACTCCTCGCAGGAGGCCAATTGGTGGGCCTCGTGTTAGAAACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031124