Difference between revisions of "BGIOSGA033144"

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(Created page with "{{IndicaGene| GeneName = BGIOSGA033144| Description = BGIOSGA033144| Definition = Oryza sativa Indica Group BGIOSGA033144, complete gene.| tag = | tid = BGIOSGA033144-TA|...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA033144|
 
GeneName = BGIOSGA033144|

Revision as of 17:37, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA033144

Description

BGIOSGA033144

Definition

Oryza sativa Indica Group BGIOSGA033144, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA033144-TA

Ensembl Protein ID

BGIOSGA033144-PA

Length

5687

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:16935464..16941150

Sequence Coding Region

16935464..16935636,16935849..16936008,16936114..16936196,16936307..16936442,16937075..16937188
,16937292..16937375,16937463..16937618,16937714..16937788,16938288..16938394
,16938478..16938658,16938802..16938990,16939367..16939447,16939591..16939725
,16939977..16940299,16940473..16940578,16940704..16940853,16941004..16941150

Genome Context

<gbrowseImage1> name=IndicaChromosome10:16935464..16941150 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:16935464..16941150 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACTCCGGCAAGTACGTGCGGTACACGCCGGAGCAGGTGGAGGCGCTGGAGAGGGTGTACGCCGAGTGCCCCAAGCCCAGCTCCTCCCGCCGCCAGCAGCTGCTCCGCGACTGCCCCATCCTCGCCAACATCGAGCCCAAGCAGATCAAGGTCTGGTTCCAGAACAGAAGGTGCCGAGATAAGCAGCGGAAGGAGGCATCAAGGCTTCAGGCCGTGAACCGAAAATTGACGGCGATGAATAAGCTTCTCATGGAGGAGAATGAGCGTCTTCAGAAGCAGGTCTCCCAGCTGGTCCATGAGAACGCGTACATGAAGCAGCAACTTCAGAATCCGTCATTGGGCAATGATACAAGCTGTGAATCAAATGTGACCACTCCTCAGAACCCTCTGAGAGATGCAAGTAACCCGTCTGGACTCCTTACAATTGCGGAGGAGACCCTGACAGAGTTCCTCTCCAAGGCTACAGGGACTGCTGTTGATTGGGTGCCAATGCCTGGGATGAAGGTTGATTGCCAACTTCTCAGATTCACTCTGCCTGCATCGAATGACATCGTGGAGATCTTAAAAGACCGCCCATCTTGGTTCCGTGATTGTCGAAGTCTTGAAGTCTTCACAATGTTTCCAGCTGGAAATGGTGGCACGATCGAACTTGTTTACATGCAGATGTATGCTCCTACTACTTTGGTTCCTGCACGAGATTTTTGGACACTTAGATACACAACTACAATGGATGATGGCAGCCTTGTGGTCTGTGAGAGATCATTGAGTGGTTCTGGAGGTGGTCCAAGTACAGCCTCCGCACAGCAATTTGTAAGAGCTGAGATGCTTCCTAGCGGCTATCTAGTGCGCCCATGCGAGGGTGGTGGCTCCATCGTGCATATTGTGGACCATCTGGATCTTGAGGCTTGGAGTGTTCCAGAAGTGCTTCGGCCACTCTACGAGTCATCTAGGGTAGTTGCTCAGAAAATGACTACTGCAGCACTACGGCACATCAGACAAATTGCTCAAGAGACAAGCGGGGAGGTTGTATACGCTTTGGGGAGGCAACCTGCTGTTTTGCGGACATTTAGTCAGAGGTTGAGTAGAGGCTTCAATGATGCTATTAGTGGTTTCAACGATGATGGTTGGTCTGTCATGGGTGGGGATGGCATTGAAGATGTGATCATTGCTTGCAATGCAAAGAAGGTTAGGAATACTAGCACTTCGGCCAATGCTTTTGTAACTCCAGGAGGTGTTATATGTGCTAAGGCATCCATGCTACTGCAGAGTGTCCCACCTGCAGTTTTGGTTCGATTTTTGAGGGAACATCGTTCTGAATGGGCGGATTATAACTTCGATGCATATTCAGCTTCATCTCTGAAGACAAGCTCATGTTCACTTCCTGGGTTGCGGCCTATGAGATTTTCTGGGAGCCAGATCATTATGCCACTTGCTCACACGGTGGAGAATGAAGAGATTTTAGAAGTTGTCCGTCTTGAAGGACAAGCACTTACACATGATGATGGTCTTATGTCTAGAGATATTCACCTGCTTCAGCTTTGCACTGGAATAGATGAGAAATCAATGGGATCCTGCTTCCAGCTTGTCTTTGCACCAATCGATGAGCTTTTCCCTGATGATGCTCCGTTAATATCTTCAGGCTTTCGTGTTATACCGCTGGACATGAAAACAGATGGTACACCTGCTGGTAGAACATTAGATTTGGCATCTAGCCTTGAAGTTGGTTCAACTGCACAGCCCACAGGGGATGCATCTATGGATGACTGTAATCTACGATCAGTGCTGACAATTGCCTTTCAGTTCCCTTATGAAATGCATCTCCAAGACAGCGTTGCAACTATGGCCCGGCAATATGTCCGCAGTATTGTTTCCTCTGTTCAGAGAGTATCAATGGCTATTTCTCCTTCTCGGTCTGGCTTGAATGCTGGGCAGAAGATAATTTCAGGCTTCCCTGAAGCCCCAACGCTAGCTCGTTGGATTTGCCAAAGCTACCAGTTCCATTTGGGGGTGGAGTTACTTAGGCAGGCAGATGATGCTGGGGAAGCACTATTGAAAATGCTATGGGATTACGAAGACGCTATTTTGTGCTGTTCTTTCAAGGAAAAGCCTGTATTTACTTTTGCCAACGAGATGGGACTAAACATGCTAGAAACATCTCTCGTCGCTCTCCAAGATCTCTCACTGGACAAGATATTTGATGAAGCCGGTAGGAAGGCCCTATACAACGAGATCCCGAAATTGATGGAACAGGGTTACGTGTACCTGCCTGGTGGAGTGTGCTTGTCCGGGATGGGGCGCCATGTTTCTTTCGAGCAAGCTGTAGCATGGAAGGTGCTCGGAGAAGACAACAATGTGCACTGCCTCGCCTTCTGCTTCGTCAACTGGTCCTTCGTGTGA</cdnaseq>

Protein Sequence

<aaseq>MDSGKYVRYTPEQVEALERVYAECPKPSSSRRQQLLRDCPILANIEPKQIKVWFQNRRCRDKQRKEASRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSLGNDTSCESNVTTPQNPLRDASNPSGLLTIAEETLTEFLSKATGTAVDWVPMPGMKVDCQLLRFTLPASNDIVEILKDRPSWFRDCRSLEVFTMFPAGNGGTIELVYMQMYAPTTLVPARDFWTLRYTTTMDDGSLVVCERSLSGSGGGPSTASAQQFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVIIACNAKKVRNTSTSANAFVTPGGVICAKASMLLQSVPPAVLVRFLREHRSEWADYNFDAYSASSLKTSSCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQALTHDDGLMSRDIHLLQLCTGIDEKSMGSCFQLVFAPIDELFPDDAPLISSGFRVIPLDMKTDGTPAGRTLDLASSLEVGSTAQPTGDASMDDCNLRSVLTIAFQFPYEMHLQDSVATMARQYVRSIVSSVQRVSMAISPSRSGLNAGQKIISGFPEAPTLARWICQSYQFHLGVELLRQADDAGEALLKMLWDYEDAILCCSFKEKPVFTFANEMGLNMLETSLVALQDLSLDKIFDEAGRKALYNEIPKLMEQGYVYLPGGVCLSGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV</aaseq>

Gene Sequence

<dnaseqindica>1..173#386..545#651..733#844..979#1612..1725#1829..1912#2000..2155#2251..2325#2825..2931#3015..3195#3339..3527#3904..3984#4128..4262#4514..4836#5010..5115#5241..5390#5541..5687#ATGGACTCCGGCAAGTACGTGCGGTACACGCCGGAGCAGGTGGAGGCGCTGGAGAGGGTGTACGCCGAGTGCCCCAAGCCCAGCTCCTCCCGCCGCCAGCAGCTGCTCCGCGACTGCCCCATCCTCGCCAACATCGAGCCCAAGCAGATCAAGGTCTGGTTCCAGAACAGAAGGTGAGCCTAATCATGCACACATATACTATCATACTAGTTTGCCCTTTTTTTTTTTGTGTGTCTGGATGTGAAATGTTATGGTCTTATGGATAAATTGGTTGAGAATGGAGCAATAGCAATGGTAGTGTTCAATTGTTTGCCTTTGTTGGTATTGTGAGGATACAGGAAGAAAGTTACTTGTTGTGGGGTTCTTGAATGTGTTTGCTTTGCAGGTGCCGAGATAAGCAGCGGAAGGAGGCATCAAGGCTTCAGGCCGTGAACCGAAAATTGACGGCGATGAATAAGCTTCTCATGGAGGAGAATGAGCGTCTTCAGAAGCAGGTCTCCCAGCTGGTCCATGAGAACGCGTACATGAAGCAGCAACTTCAGAATGTATGTCTTCGTGTTGTTGAGCTCACATCGTGCTTCGGGTGGAAAAGGCGCTGCCCTTTCTTTGTTTTCTCGCCTGCTCATATCATCTCTGTTCATTGTTTGCAGCCGTCATTGGGCAATGATACAAGCTGTGAATCAAATGTGACCACTCCTCAGAACCCTCTGAGAGATGCAAGTAACCCGTCTGGGTTAGTGAAATTTCCTTTGAATGTTTTGGTTTTGGGCAATTGGAAGCGGCTGCCCTCTAGGGATTGGTTTGCCATTTTCTTGATAAACTAGTTATATGATTTTTGTCCAGACTCCTTACAATTGCGGAGGAGACCCTGACAGAGTTCCTCTCCAAGGCTACAGGGACTGCTGTTGATTGGGTGCCAATGCCTGGGATGAAGGTTGATTGCCAACTTCTCAGATTCACTCTGCCTGCATCGAATGACGTGTGCATTCGAATGTTCTTATTTGTGTTCCCTTTTCTTTGATAAGCCTGTCCGGATTCGTTTGGTATTGTGCCGTTTCACATGGTTGCCGTGTGTGCTGCCCGTGCCTGTGGTTTGGTGAATCTAGAACCAACAAAGGTAATAGCATTCATCAGTACTTCATTTATTTATTTATTTTTAATTCTTAATTCTACAACAATGCCTGCTGTTTGCTTCCAAGAAAAAGAATTCCTAAACCAGCTTCATCTGCAAGTAACTATGCTGTTTTCATGCTGACATACTTTTGATCAAAGAAAAGTCCTTTAAAGTACCCGTCACAAGCACAACTAGCTGTGCTGTGCATACATGAACTCTTTTTTACTTGAGGGGCAGACTCCTTTACTAGAATGAAGAGTTGCCAAGTTTTCGGTCTCACGCCATCCACAAAAAGAAAAGTTCTCGCTCTCTCTGGCTTGACAGCTAAGGTGTTCCACATCCAAAGATTCATTGCAAAATCTTCTCTTCATGCATTTTGTTCCATGTTGGACATAATTCTTCATACGTATTTGGTTGATGTGAATATTTTCTAGAAAGCTGAAAGACTTTATTGTTTTCAGAAAATTGTTGGGAGATTCTTATAGTGTGCTATGCAGATCGTGGAGATCTTAAAAGACCGCCCATCTTGGTTCCGTGATTGTCGAAGTCTTGAAGTCTTCACAATGTTTCCAGCTGGAAATGGTGGCACGATCGAACTTGTTTACATGCAGGTGAGCGTTACATCCTAACTTTTTTCTTGAATTAAGTATCCCATCATTAATTTTTGCCACATGCATTCCCTTTTTATTTATCATTCTTGGCTTTTTCGCTCAGATGTATGCTCCTACTACTTTGGTTCCTGCACGAGATTTTTGGACACTTAGATACACAACTACAATGGATGATGGCAGCCTTGTGGTGCGTTGAGCTTGAGCATCTTCATTTTATTTTAGTTTGCCTACATTGTAAATTAGCACAGGTGTCCTAAGTCCATGTATCTTGCAGGTCTGTGAGAGATCATTGAGTGGTTCTGGAGGTGGTCCAAGTACAGCCTCCGCACAGCAATTTGTAAGAGCTGAGATGCTTCCTAGCGGCTATCTAGTGCGCCCATGCGAGGGTGGTGGCTCCATCGTGCATATTGTGGACCATCTGGATCTTGAGGTGTGATCTTCAAGTTCTGCATTCTTTCTAGTTAGATGTGCTCTGCATTTGAGTCATTATTTCTTTTATTAATTTACTTAGATTCCATTTTACAGGCTTGGAGTGTTCCAGAAGTGCTTCGGCCACTCTACGAGTCATCTAGGGTAGTTGCTCAGAAAATGACTACTGCAGTAAGTTCCTATAACATTTCCTGATCTGCTTTTCTCTTGACAATTCAATGATATTCTCTCTTGTTACATACATATATATGAAGAAATGCCCACTGTTTCCTTATGATTGGTCATTTCCTCAAGACCTACAATTGCATGGTGCAATCCCAATGTTAAGTACCCACTGTTTGTAGTTAGATTAGACGGTTCATACATTGTTCAGTCCCCATAGTAAGTATTACAACGCCTACACCTGAGAAGTGTTGACATATCACTAAATTCTTTGTTTCCTGAAAGTCTAATAGTTTTGGAGAGTTAAGGTTGGGGTAGTGCTTGAGCCTGTAATGTCAATTTCATCATTTTTTTTTCTAGAGGCTACTTAGCCTTATTCAAATAAGTATACTGAAGTGCTTTAAGTTTTCTTTCATATATATTCTAATCATAGCCCATCTTTGCATCTTTGGACTACTGAAATGATATTAATTTTCTTCGTCATATAATGATTACTCTTACTATAAAGGCACTACGGCACATCAGACAAATTGCTCAAGAGACAAGCGGGGAGGTTGTATACGCTTTGGGGAGGCAACCTGCTGTTTTGCGGACATTTAGTCAGAGGTTGAGTAGGTATGTCCAGGATATAAACTTCTTTCGCTTCTACTGTTTATATTGGATGTTTTTTATTCTAACACATTACTATGCCCATTTAGAGGCTTCAATGATGCTATTAGTGGTTTCAACGATGATGGTTGGTCTGTCATGGGTGGGGATGGCATTGAAGATGTGATCATTGCTTGCAATGCAAAGAAGGTTAGGAATACTAGCACTTCGGCCAATGCTTTTGTAACTCCAGGAGGTGTTATATGTGCTAAGGCATCCATGCTACTGCAGGTGAGTGTTAAATATAAATTTGTTTCTATCGATGCAGGCTGCTTAGTTTTCAGTGCCTAAGATGTGAATTCACTTACGTTTTGTTTTTTATTCTTAACTGTAACTTTTCAAGAGCTTACTTTTTTTTTTAATTTGCATCCTAGAGTGTCCCACCTGCAGTTTTGGTTCGATTTTTGAGGGAACATCGTTCTGAATGGGCGGATTATAACTTCGATGCATATTCAGCTTCATCTCTGAAGACAAGCTCATGTTCACTTCCTGGGTTGCGGCCTATGAGATTTTCTGGGAGCCAGATCATTATGCCACTTGCTCACACGGTGGAGAATGAAGAGGTATGCTGACAGATCTTTAACATTTCATAACTTGCTAGGTGCTGTTCCGTGACTATTTTCATTATTAGGTTTTTTTTATTTTTATATAGTATCTTTGAATATGTTCTTATTTATCTAGTTTATTGTCATTTTTCCAATTGATGATAGAGGATTTCTATGTAGCCTTCCATTGTTATTATTATGTCCCTTTAGTAGTTGGTCTTTGTGCTACTTTCCTTGTCTAGTAGTGTGGGGGATCCATTTGTCTGTTGTTCACAAAGTGAGCTTTATAAAAGTCTATATCATTTGGACAAAAACAACTGACAATTTGCATTTATACAAGATAAGATTTATCACTTTTCATGCTACTTTGTTGATGAGTTTTATCAACATACAGATTTTAGAAGTTGTCCGTCTTGAAGGACAAGCACTTACACATGATGATGGTCTTATGTCTAGAGATATTCACCTGCTTCAGGTAATAATTCTCTTCTTTCGGCGCTATCTGGTTTTCAAAAGAGCACTATTACCAATCGCAGTAAAAAAGAGCAAATTATTCTAATAATTAAGTCCCGTTGCAAGGAATTCCTAATGTACCTCCCATCTTGCCTGATCTTTCAGCTTTGCACTGGAATAGATGAGAAATCAATGGGATCCTGCTTCCAGCTTGTCTTTGCACCAATCGATGAGCTTTTCCCTGATGATGCTCCGTTAATATCTTCAGGCTTTCGTGTTATACCGCTGGACATGAAAACAGTGAGTTTTTCTCATGTTAGCCTTTCTTTTTAAGTGCATTAGTTCTGTGTTGTATGGATAATTCTTGAAATTTTTCTGTTCTTTTGAACTCCCATGTAGTGCAAACCATTTTTGGTAGCTTATGGGTTAAAAGCCTTCTAACTTCTGTAGGATGGAGATCCATTAGACCTGAACATCTTGTTTCTACCTTGTTACTTCTATCTGGTTTGATTTTCAGCAGCTAGGATTTTAACCATCAATGTCTTCCACAGGATGGTACACCTGCTGGTAGAACATTAGATTTGGCATCTAGCCTTGAAGTTGGTTCAACTGCACAGCCCACAGGGGATGCATCTATGGATGACTGTAATCTACGATCAGTGCTGACAATTGCCTTTCAGTTCCCTTATGAAATGCATCTCCAAGACAGCGTTGCAACTATGGCCCGGCAATATGTCCGCAGTATTGTTTCCTCTGTTCAGAGAGTATCAATGGCTATTTCTCCTTCTCGGTCTGGCTTGAATGCTGGGCAGAAGATAATTTCAGGCTTCCCTGAAGCCCCAACGCTAGCTCGTTGGATTTGCCAAAGCTACCAGTAAGTACATGTTTATTTCCTATATATCTTATGAATGCCTTTTGGTATTAATAGATAGGAGCTGCATTATTGCTCTATACGGCTATACCACTACCTGTCCAAAATTAAAAATATAGGACTATTACCAAATATTAACTTGTATTCAAGCTGATAAGGATTTGTGGTGTTTGCAGGTTCCATTTGGGGGTGGAGTTACTTAGGCAGGCAGATGATGCTGGGGAAGCACTATTGAAAATGCTATGGGATTACGAAGACGCTATTTTGTGCTGTTCTTTCAAGGTACTATAGTTTTTCCCTTGTTCTTTTCATAATTTCCAACTTGTACATTTTATGTCGTTACATTTAAGTGAGAATAAGCTTTGCCTTTGTATGGCTCATATATTTGGCACTATATATTCTTTCAGGAAAAGCCTGTATTTACTTTTGCCAACGAGATGGGACTAAACATGCTAGAAACATCTCTCGTCGCTCTCCAAGATCTCTCACTGGACAAGATATTTGATGAAGCCGGTAGGAAGGCCCTATACAACGAGATCCCGAAATTGATGGAACAGGTAGATAGCCACTTGCAAAATCCACATTTTCTTTTCCCCATGTAATAACAGCAATGTCCTAACTGCTAAACACAAACCAAGTAGAGATGCAAGAACTCACCGTAGCCACAGAGTAATCTTTCGATTTCGATTCAATCTGTTCTTGTTCAGGGTTACGTGTACCTGCCTGGTGGAGTGTGCTTGTCCGGGATGGGGCGCCATGTTTCTTTCGAGCAAGCTGTAGCATGGAAGGTGCTCGGAGAAGACAACAATGTGCACTGCCTCGCCTTCTGCTTCGTCAACTGGTCCTTCGTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA033144