Difference between revisions of "BGIOSGA034312"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA034312| Description = Alcohol dehydrogenase 1Alcohol dehydrogenase| Definition = Oryza sativa Indica Group BGIOSGA034312, complete gene.| t...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA034312|
 
GeneName = BGIOSGA034312|

Revision as of 17:43, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA034312

Description

Alcohol dehydrogenase 1Alcohol dehydrogenase

Definition

Oryza sativa Indica Group BGIOSGA034312, complete gene.

LocusTag

ADH1

Ensembl Transcript ID

BGIOSGA034312-TA

Ensembl Protein ID

BGIOSGA034312-PA

Length

2894

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:5224733..5227626

Sequence Coding Region

5227593..5227626,5227197..5227333),complement(5227053..5227099,5225895..5226220),complement(5225727..5225809
,5225572..5225647),complement(5225429..5225490,5225253..5225348),complement(5225009..5225170
,5224733..5224849

Genome Context

<gbrowseImage1> name=IndicaChromosome11:5224733..5227626 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:5224733..5227626 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACCGCAGGGAAGGTGATCAAGTGCAAAGCGGCGGTGGCATGGGAGGCCGCGAAGCCGCTGGTGATCGAGGAGGTGGAGGTGGCGCCGCCGCAGGCCATGGAGGTGCGCGTCAAGATCCTCTTCACCTCGCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGGACAGACTCCCGTGTTCCCTCGGATCTTCGGCCATGAAGCTGGAGGTATTGTGGAGAGTGTTGGAGAGGGTGTGACTGATCTTGCCCCTGGTGACCATGTTCTCCCTGTGTTCACTGGGGAGTGCAAGGAGTGTGCCCACTGCAAGTCAGCAGAGAGCAACATGTGTGATCTGCTCAGGATCAACACTGACAGGGGTGTGATGATTGGTGATGGCAAATCACGCTTTTCCATCAACGGGAAGCCCATTTACCATTTCGTCGGGACTTCGACCTTCAGCGAGTACACTGTCATGCATGTTGGTTGCGTTGCGAAGATCAACCCGGCAGCTCCACTTGATAAAGTTTGCGTTCTTAGCTGTGGTATTTCTACTGGTCTTGGTGCTACAATCAATGTGGCAAAGCCACCAAAGGGTTCGACGGTGGCGATATTTGGTCTAGGAGCTGTAGGCCTTGCTGCCGCAGAAGGTGCAAGGATTGCAGGAGCGTCAAGGATCATTGGCATTGACCTGAACGCCAACAGATTTGAAGAAGCTAGGAAATTTGGTTGCACTGAATTTGTGAACCCAAAGGACCATGACAAGCCAGTTCAGCAGGTACTTGCTGAGATGACCAATGGCGGAGTTGACCGCAGCGTTGAATGCACTGGCAACATCAACGCCATGATCCAAGCATTTGAATGTGTTCATGATGGCTGGGGTGTTGCTGTTCTGGTCGGCGTGCCACACAAGGACGCCGAGTTCAAGACCCACCCGATGAACTTCCTGAACGAGAGGACTCTCAAGGGAACCTTCTTCGGCAACTACAAGCCGCGCACCGATCTGCCCAACGTCGTCGAGCTCTACATGAAGAAGGAGCTGGAGGTGGAGAAGTTCATCACACACAGCGTGCCGTTCTCGGAGATCAACACGGCGTTCGACCTGATGCACAAGGGCGAGGGCATCCGCTGCATCATCCGCATGGAGAACTGA</cdnaseq>

Protein Sequence

<aaseq>MATAGKVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTPVFPRIFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGISTGLGATINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGIDLNANRFEEARKFGCTEFVNPKDHDKPVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINTAFDLMHKGEGIRCIIRMEN</aaseq>

Gene Sequence

<dnaseqindica>1..34#294..430#528..574#1407..1732#1818..1900#1980..2055#2137..2198#2279..2374#2457..2618#2778..2894#ATGGCGACCGCAGGGAAGGTGATCAAGTGCAAAGGTCAGTGCTTTTCCTCCCCTCCCTGTTTCTTCTTGGTTCGATTTTGCTTTGGATTGGGCGAACTTTTAGGCATTTTATTACTGGAGCGGCGCTGTAGATGAAATTCTTGGATTGTGTTCTTTTTAGAGTTTTCTTGGGTGAACATTACCGATCTTGCAGAAGCTGTGGAGAAAAGCATATCTTTTTTTTTAGTGAAAAATGTCATTCAGGATTATGTTTTTTTGGTGGATTGGTGGGTGATTTTGCTGGATCTGTGCAGCGGCGGTGGCATGGGAGGCCGCGAAGCCGCTGGTGATCGAGGAGGTGGAGGTGGCGCCGCCGCAGGCCATGGAGGTGCGCGTCAAGATCCTCTTCACCTCGCTCTGCCACACCGACGTCTACTTCTGGGAGGCCAAGGTATCTACTCACCTCCTCTTCTTCAGTTCCTATCCATCCATAGCTGCTCCAATGTGTGGTTGACTTGCGCCTCTTGTGTGGCTTCTGAATCTCTTAGGGACAGACTCCCGTGTTCCCTCGGATCTTCGGCCATGAAGCTGGAGGGTATGTGCTTTTATGCATCTTCTTCCTTGATTTTGTTTCTTGTTAATACTTGGTTGCTCTGATGCATGCTTTTGTTGCTGATGTGTGATGTGGCATGCTGTTAGTTAATTGATTTGTTGTTACTACCTGGTTACTCCACTGTTGTGGTTGCTAGTGTGGCCTGTTGTTAATTAATTGATTCTTTGTTAGTACTACTTGGTTACTCTGCTGCTCTGGTTGCTGGTGTGTTGTGTTGTTAATTAATTGGCTCGTTGTTACTTCTTGGTTTACTCTACTGCTCTGGTTGCTGATGTGGCATGTTGTTAAGTACTTAAAACTATGCTTTGTGGTTGAATCTTCCTCTAATTGCAGTTTAGGGGGGGGGGGGGTCATTGTTTATTGGCTTGGCATTAGTAGAACATTTGGCTGAGGTAATCTGGACAACATGGGAAAGAATCATATGGGCACATGCTGTTGCCTGTGTCAAACATTATAAATGTGTGCTATTTTTGTGGGTCTTCAGTTGGATCTTGATAGATTTATCAATTTATAACTTATTACAAGGAAGAAACTTTTTCTTTCAGTTAGTAGTTGGTAGTTTATTTTTGAAGTTGGCAGATTTATTTGTGATAGGCGTTGATTGACCCTTTAGAAGACTTCTATTCAATAAGTTTGTATTTTCCAGTTGACAAAGGGCATATAAATTAGGCATTGCTTGACCTTTATGCTACCTAACATATTCATGGCACCCTTTCTATTTTCTGAAATACAGCGTGGATTATTTTTTTTAACACTTCCATTGAGTAAAAGATTCCTATTGTTCATATCTGCTGAAATTTATTCATTTCTGCAGTATTGTGGAGAGTGTTGGAGAGGGTGTGACTGATCTTGCCCCTGGTGACCATGTTCTCCCTGTGTTCACTGGGGAGTGCAAGGAGTGTGCCCACTGCAAGTCAGCAGAGAGCAACATGTGTGATCTGCTCAGGATCAACACTGACAGGGGTGTGATGATTGGTGATGGCAAATCACGCTTTTCCATCAACGGGAAGCCCATTTACCATTTCGTCGGGACTTCGACCTTCAGCGAGTACACTGTCATGCATGTTGGTTGCGTTGCGAAGATCAACCCGGCAGCTCCACTTGATAAAGTTTGCGTTCTTAGCTGTGGTATTTCTACTGGTAAGCAGAATTTTTTTTGTTTCTTGCATTCTTCTTACTTGATAGAATGTAAGTTGAGATGCTGAGTCGCAATTTCCTTTTGTAGGTCTTGGTGCTACAATCAATGTGGCAAAGCCACCAAAGGGTTCGACGGTGGCGATATTTGGTCTAGGAGCTGTAGGCCTTGCTGTGAGTGTCTGAACTCACCTTGAATGTTCTCAATTACAATGAGAGATCCATCTAATTACTCTACATATTGTCTGATTAGGCCGCAGAAGGTGCAAGGATTGCAGGAGCGTCAAGGATCATTGGCATTGACCTGAACGCCAACAGATTTGAAGAAGGTAAAATCCTCTTGATTTACCAGATCATCAGTTTGTTTGATGGTCTTTTAAAGTCATCTTATATATTTTGTATATCTTCAGCTAGGAAATTTGGTTGCACTGAATTTGTGAACCCAAAGGACCATGACAAGCCAGTTCAGCAGGTATGTATGTTCCCTTACATCAGGAAAAGGAAAATCTGTATCACTTGATTGTACTGATACAGTGTGTTATGGTAATTTAGGTACTTGCTGAGATGACCAATGGCGGAGTTGACCGCAGCGTTGAATGCACTGGCAACATCAACGCCATGATCCAAGCATTTGAATGTGTTCATGATGTAAGATCTGAAAACAGCATATTGTCCACTTAATACAGTTAATTCGACAAGATGCTAAATATATTATATGTTCTGAATCCAGGGCTGGGGTGTTGCTGTTCTGGTCGGCGTGCCACACAAGGACGCCGAGTTCAAGACCCACCCGATGAACTTCCTGAACGAGAGGACTCTCAAGGGAACCTTCTTCGGCAACTACAAGCCGCGCACCGATCTGCCCAACGTCGTCGAGCTCTACATGAAGAAGGTGAATACAAATCGCGAATCCTTCCTTTCGCTTTATCCAACTATTACAAACTAAGAGTAGTCGCAAAATCTTCAAATGTTCATCGACCTCAATCAAGAACTTCTGAAAGTTGGGTGTGTCCATGCTCTTATATGCATACCTCCGCTGTTGTGAATTCAGGAGCTGGAGGTGGAGAAGTTCATCACACACAGCGTGCCGTTCTCGGAGATCAACACGGCGTTCGACCTGATGCACAAGGGCGAGGGCATCCGCTGCATCATCCGCATGGAGAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA034312