Difference between revisions of "BGIOSGA036314"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA036314| Description = cDNA clone:002-111-D03, full insert sequencecDNA| Definition = Oryza sativa Indica Group BGIOSGA036314, complete gene....")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA036314|
 
GeneName = BGIOSGA036314|

Revision as of 18:27, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA036314

Description

cDNA clone:002-111-D03, full insert sequencecDNA

Definition

Oryza sativa Indica Group BGIOSGA036314, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA036314-TA

Ensembl Protein ID

BGIOSGA036314-PA

Length

7590

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:10179908..10187497

Sequence Coding Region

10187226..10187497,10186865..10186961,10182698..10182921,10182033..10182104,10181662..10181928
,10181287..10181375,10180593..10180657,10180140..10180271,10179908..10180030

Genome Context

<gbrowseImage1> name=IndicaChromosome12:10179908..10187497 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:10179908..10187497 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTTCTTCGGCGGGCAGCGGAGGATGACGGGGACGAGCGTTAGCTGGCAACGCCTCGCCGTCTATGGATTTGGGTGGCTCAGCGGTGTCGACGGTAACTCCAGCGAGATGGTTCGGGACGCAGCCGGAGCTGATGACGCCTTACGGGCACCGAGTAGCGACGCTCCGACGGGGTTCTCTTCAAGCAGCAAGAAAATGTGTGTAGAAGATAGCAGCGTTGATGAGGGCGAGCGGAAGTCGATGACGTTGCGGAGAAGAGGCCGCGACCGCGATCGTCTCCTCCCTAGCGCGCCTCCTCGCCGGAAGCCGAGGTGCTGCGGCCAACGTCACCGACTGCCGAGCCACGCGTTCACGCCGGACGCCGAGATATGGGCCCCACCGGTCGGCTATACGCCTACTCCAGGTTGGAGAAGGAAAGGACGAAGCGTGCACGCAAACTCACCACTCGACTTCCGCGGCACCACCTCTTCCCCTCCCCTACCTCTCCGTCCTCCGCCCCTCCCATCTGGCCTGGACGACGGTGGAGGCTCTGGAGGAGGAAGTGAACATGAGCAGGAGCACGCGCAGGCGCAGATGGATGTCAGGAGCAGGAACATGAAGAAGCAGGCAAACAGAGACGGCAAAAGAGAGAGTGTCAAGCTTTCACACACAGAACTCAGAAGATATCAGCTTGATGTCTATGAGGTTGCAATGCGGAGAAACACGATTGCGATGCTTGACACAGGAGCTGGGAAGATAATGATTGCTGTGATGTTTATCAAGGAGTTTGGAAAGATAAATAGAACAAAGAATGCTGGAAAAGTCATCATATTTCTTGCACCAACAGTTCAACTTGTTGCACAGGTTATACCAGAGTCTGTAGACTGTTCGTTTTACCCTAACTGTAACATAATTTATACTGACATTATTTTTCGCCACAGCAATGCGAGCACTTATAATAATGAAATTACAGGTCATGGTCATGACACCACAGGTGTTCCTACAAGCTTTACGCAATGCTTTCTTGATCTTGGACAAGGTGTCTCTTCTCATTTGGATTGTGAAGGTCAATTCTGTGAATTGGAAAACCTGTTAGATGCCAAGATCTACAGAGTTTCAGATAGAGAAGAGATAGAGCTTTGCGTTCCTTCTGCAAAAGAAATGTACAGATTCTATGACCCGAAAACAATTTGTTTTGAAGATTTGAGTGAAGAATTGGGAGTTTTATGTCCCAAGTATGATGCATTGATAACAGAGTTGCAGAATAAGCAAAGCTACATGTATGAAGATGCTGATGATATAACAAAAGAATCAAGGAGACGCCTTTCTAATTTTAGCAAAAATTTGCTACTGCCTTGA</cdnaseq>

Protein Sequence

<aaseq>MAFFGGQRRMTGTSVSWQRLAVYGFGWLSGVDGNSSEMVRDAAGADDALRAPSSDAPTGFSSSSKKMCVEDSSVDEGERKSMTLRRRGRDRDRLLPSAPPRRKPRCCGQRHRLPSHAFTPDAEIWAPPVGYTPTPGWRRKGRSVHANSPLDFRGTTSSPPLPLRPPPLPSGLDDGGGSGGGSEHEQEHAQAQMDVRSRNMKKQANRDGKRESVKLSHTELRRYQLDVYEVAMRRNTIAMLDTGAGKIMIAVMFIKEFGKINRTKNAGKVIIFLAPTVQLVAQVIPESVDCSFYPNCNIIYTDIIFRHSNASTYNNEITGHGHDTTGVPTSFTQCFLDLGQGVSSHLDCEGQFCELENLLDAKIYRVSDREEIELCVPSAKEMYRFYDPKTICFEDLSEELGVLCPKYDALITELQNKQSYMYEDADDITKESRRRLSNFSKNLLLP</aaseq>

Gene Sequence

<dnaseqindica>1..272#537..633#4577..4800#5394..5465#5570..5836#6123..6211#6841..6905#7227..7358#7468..7590#ATGGCCTTCTTCGGCGGGCAGCGGAGGATGACGGGGACGAGCGTTAGCTGGCAACGCCTCGCCGTCTATGGATTTGGGTGGCTCAGCGGTGTCGACGGTAACTCCAGCGAGATGGTTCGGGACGCAGCCGGAGCTGATGACGCCTTACGGGCACCGAGTAGCGACGCTCCGACGGGGTTCTCTTCAAGCAGCAAGAAAATGTGTGTAGAAGATAGCAGCGTTGATGAGGGCGAGCGGAAGTCGATGACGTTGCGGAGAAGAGGCCGCGACCGGTAAGGCGACGACGTCCAAGCATCTCGGCGACATCGCCGCGCCTTGCAGGAACGTCGTCTCAACCTTGACGGAGACCAGCGGACGATGTCGACAGATCGGTTGGCCCGGCAACTCCATGGCGATGGTGGTGTATCCGACGCCTCCCCCGCTGAGGAACATTGTCCCGGCATGCATGCACTGAAATGAAACAGAGGAATGACAAGAAAATATAGGCTAGTTACCCATGGCAGTGAGTTGGGCTGTTATCGTCTTGCTTCTCCCAGCGATCGTCTCCTCCCTAGCGCGCCTCCTCGCCGGAAGCCGAGGTGCTGCGGCCAACGTCACCGACTGCCGAGCCACGCGTTCACGCCGGACGCCGAGGTACTCCGGCCAAATGGCGTGTACCTCTCTTTCTCTGTCTTTCATGTGTGTGTGTGTTGGGCTCTACTGGCTACTGCCAAGGCTGGGCATGGCGCAGCGCCTGACGGCGGCGGCTGCGGCGGCGTGAAGGTGCAGGCCTTCGGCTCCTGCCTGCATCCTCCCTCTGCTGCCCCCGATGCCTCTGTATTTCTCTCTTCTGTCTCCCTCTGCTATGTGTGTATTCATCTCATGGTGTAGGCCCCCGCAGTCCCTTTATAGTAGATGAATGACGGTACTACTGATATATTGCCATGTGACCGGACGTCGGTTTGCTGGATTGCAGAGATAAAGGTTGCCATTTTGGCTGCTTAATTACCATGCATGCTCAACCAGGAAGCTTCCTGTTGCATTCCAATAGGAAACAACGTGATAATTTTCCATCTACTAATGATTGTGTGGTGGCATACTTCCATTCGCCAGAAGATGCATTGAAATTATTCCATCAAGAGCAGATACACTAACTTGTATTTATATTTGGTTGTCGACATTAATTTTATATTGATCAGCATGCTGGCTGACCAGTGGGCCTAGGTAGATGCATGGTTTCCTTTCTAATTTCATTGCAGTATTGATGTTTGCCCGCTGCCGGTAATCCAGTGTAATCAAGCACTAATTCCCCTTTTTAAAATAATTATAGAATGCACACGTCAAATTAATCACCTGCAAATGCACAGGAGCCCAGTATTTCTTGTGTACCTTGGAGATCAGTGCTTTAACTACAGTTCCTATGCACAAATCATTTTCATAATTTATTTTAGAGAAGTCCACAAAATCTCATCGAACAAATGCCCCCTCACCAAGTTAAGTCCGAGCGCGGAGCAGATCGGATTTAGCTTGGTGAAATTTTCCTTTTTTTCTGAGGAACCATAATAATTTTTTTTAATCTCATACTGCAAGCAGAGTTCAAGCACTGAATAAACAACCAAGACGAACTTGGTGGTTTTTCTATGTTGAAGAAGCGCATGTAGCTACTGCCATACTGCTTAAAGACATTTAATCCCTTCTACTAGGGCATATCTCACGGTAGTTGTAGATTATGCCACCAAAATTTTGCAATAAAGGACTGTATGAATTTTCACTATGGTATATAGTCCACCAGTATGCACTGGGGCAAAATAAATCTATGCCAGCGTCTAATGAATTAACAGAATATGAGGCAAAAAAATCCATGCCATTGTAAAAAAAATCATTCTTTAGACCTGTATATTCGTGATGAGGTCTAGAGTAAATTAATTAGGCGAACACCCTTGCCATTGTTAACAAATATCCTTTGGGCCTATATATTACTGATAAGGTCCAAAGCAAATTAATGGATTAGGCGAACAACCATGCCATTATTAACAAAATATCCCTTGGACCTCTATATGATTGATAAGATCCAAAGCAAAAGGATGAGGCGAACAACCATGCCTATATTAACAAAATACTCCTCAGACCTACGCATTCTTGATGGGGTCTAGAGTAAATATGTGAGGCGAATATCCATGCCATAATCTGTCCCGGCCACAGGGAAACAAACATGCCGTGTCCGGAGAGAATTTTATTAACCCACACACGATTGTTAAAAAAATTCCACGATATCAGCTGGATGGGTTGAAGGGTTTCACAGATTCACACTGGCCGCACTGGCGTGTTGCACTGCTCCCAAAATATGCGTAGCGGCACATCCATCGCTATGTACCAAAAATCAATAGTCATCTGGGAGACATATTGATACCGGAGTCTAAAGTTCTTTTAAGAACAAGTGAGACGAAAGTTCATGTCCAAGGAATAAGAAATTGATTTTCAGGCCGGAGACATATATTAATGTCAGGGTATAAGGAATTAAGAATATGTGAGGCTTAAATCAGTGCCATCGATAAAATATAACTTCTAAGACCAAGTACAAATGGTGTCAAGAATATTTAAGGCAGAAATCCATGCCAAAAATTTATTCTTCAAGGGATCAAGACCAGCATGAAGAATTGCCAGGCAAAAGTATATGCCCCAGATAAAATTTATATTTCTTAAGACAATGACAACTAGTCTCAAGGATATTTGAGGTGAAGGTCCATGCCGGAAATTCATTCTTCAAACTAGCCGGATGACACATGTTAGCTAGTCTGAAGAATTGTGAGGCGAAAATACGTGCCTTCGATAAACAATTATATATTTCTTAAAACCCTTCATGAATGGTTTTAAGAATATTTGAGGCGAATCCATGCCAAAATGATGATTTATTCATTAAACCGGCCTGGCTGTAGATTAATGCCAGTGTAAAGAATGGTGAGGCAACACTACATGCCCCCTGTAAACATATATATATTTCTCAAGACCAATGATGAACTGTCAAGAATATTGTGGCGCAAATCCATGCCGAAAACGGGATTCATTCTTCGGACCAGACATTAGATTAATGATGATCTAAAGATCAGTGTGGCGAAAGTCCATGCCACTACTAAAGAAAACATGTGTGAGGCGTAAATCCATGCCTTTCTCAATCCATGGCAAAAGAACATGCGATTTCTTGAAGGGTTTTATCAACCAAGTCGCGACCGTTTAAACTCCATGGTGCCAGCCGACTTGATCGAAAGGTTTCACAGATTCACACTAGCCGCACTGGCGTGCTGCACTGCTCCCATTGATAGGCCCCTTGATAGGTAATAGCCCTAATCCAGTTGGTATGGGATTATATAGTAAAACCACATATTACAAAGGGAATAGCAGAACTCGATGATACCGACAAGACTGTAGTTGAGTTGGTTCGACTAGATCACCCCGGCGACTAGGCTCCTGAAGGCTCCGACTTCGTAGGCTGTGGTGGTTGTGTTGGTGGTGAGATTCGATGCCTTAGTTCCTCCCGGGGGGTCCCTTTTATACCGCAGGTCAATTGGTCTCCAAGTAGAACTCGGAGACATCGGAGCCTATACGATACTGTTACGACCCAGTTCTATCCGAGTGGTACTCCTTCCATCCGTGGACTCCGTGATGAATTTCCTTAACGTGTACAAAGAATGTCCGTATACGCACGGGTATACCATACCAGTACACGACGTATATCCAAGAGTAGAGGGTATACCTTATCCGTAACCCTGACAGTTTTCGTATAATACATGGTATGTGGTGGGTCCTGCCGAGATTTAGTCAACTACTATTTGGTATGTGGTATCCATAACCCTGACAACATACACCTCTTCAATAAAAAAATAATAGGATATAGTGATAGTAGAAAAAGATTAAAAAACCGAGCAATTATATAAGTGTTAGAAATATACGAAAGAAGAAATCCATGAAGAAGGATAAAGTACATAGCAAAATTATAAAGATTGCATGTCTTGTGCATACTCACTACACGTATGCACGTCATATCCTAATCAATATCAGCTTTATAAAATTAACATCGCCAAATTATTTTTATCCTCGTTTGCACGAAAGAGCATTTTATAAGTTTATGTAGTAAATAACACCGACCTAATAAGTTTGTGTACCACAAATACAATTTACTTTTTTAGTAATTAAAACTCAATTATTATTAAAAATAATTAAAACTCAATTAGTCTTAATGAATTTGTCGTTTTGCATGCCGTATTTAGGCCCTATTTAGTTCTAAGGGTGAAAAGTTTTTTCATGGGAACTTAAACAGACCCTAAAAATTTTGCCCCTACATATCACATCGGATATACATGTGCACATTTGAAGTATTAAACGTAATATAATAACAAAACAAATTAGGAAACTGTAAGACGAATTTATTAAGCCTAATTAATCATCCATTAGCAAATATTTACTGTAGCACAACATTATCGAATCATGGTGCAATTAGGCTTAAAATATTCGTCTCATAATTTCTTAGCGGACTATGTAATTACTTTTTTTATACATTTAATACTATATACATCGAAGAAACGAACGCGGGAATTGATAGATATGGGCCCCACCGGTCGGCTATACGCCTACTCCAGGTTGGAGAAGGAAAGGACGAAGCGTGCACGCAAACTCACCACTCGACTTCCGCGGCACCACCTCTTCCCCTCCCCTACCTCTCCGTCCTCCGCCCCTCCCATCTGGCCTGGACGACGGTGGAGGCTCTGGAGGAGGAAGTGAACATGAGCAGGAGCACGCGCAGGCGCAGATGGATGTCAGGAGCAGGTCGGACGGAGGCGGGGCCGGCGTGATTGAGGAAATCGGCCAGCGACAGGCAGGCCACATCCGCTACCCTAACCTCCTCGTTCCGGCGAGCCCTTGATTTATGTAGAGCAAGCGTCTGGCAGATGAGGAGTTGTTTGTTTGGGCGACGGCGCTCTAGCTAGGACCAAATCTCCAGCGCTAGCTAGCTGCTGCGTCCGCATCGCAGTACGAGCCCTCGTCGGCGGGGGACGAGGTGCGCCGGCTCCACCTGTATCTGCATGCCAAAGACCATCGCGGACGCCAGGCCCGCTATTCGATCCGCTCATTCGCAGCTCAAGATCCAGCGAGGAGATGGTCGTCGCCGATGGTACCCACGTTTTTTCTAAGTGTTTTTGGGAAGGGTTTGCGAGCTAACTGACGCGAATCAGATTTATTATTTGTCAACACTTGTTTTCTTTTTCTTTTTTTTTCATATTTATCCTTTCGTGCTTCGAGGATTACTAATTTCGATCTATTTGGGTGTGAATATTCCCAATGGTGAATTGTCATGACCTCACTTGGTAATTTTTTTTGTTCGAATGGCAGTAAACATGAACCCGGAATCATCTTCTCAGGAACATGAAGAAGCAGGCAAACAGAGACGGCAAAAGAGAGAGTGTCAAGCTTTCACACACAGAACTCAGAAGGTTCTGCAGAGTTCTCCTTTTCACAGTCACTATCTTATATTCTTATATGATCAGAAAAAGAGTACAATCCTGTGACATTGCTTTGTGATGCTGAGATTGGTCAGATATCAGCTTGATGTCTATGAGGTTGCAATGCGGAGAAACACGATTGCGATGCTTGACACAGGAGCTGGGAAGATAATGATTGCTGTGATGTTTATCAAGGAGTTTGGAAAGATAAATAGAACAAAGAATGCTGGAAAAGTCATCATATTTCTTGCACCAACAGTTCAACTTGTTGCACAGGTTATACCAGAGTCTGTAGACTGTTCGTTTTACCCTAACTGTAACATAATTTATACTGACATTATTTTTCGCCACAGCAATGCGAGGTGACTGAAACTCACAGATTTTGAGGTGGAACAATGTCATGGCGCAAAGGGGGTTGATCAATGGACAGGTCCAAGATGGCAAGAGCAAATCTCAAAATATCAGGCAAGCATTTATTCTATGCTTTTTAAAGGCTCATTGATTCATCATATGTGCTAAAGAAAATATTCACTCCATGCTAGCAGCAGTTATGATCTGCAGTCTTCTGTTCACTATATTACACTAGGATATTCTTAACTTATATTTTTCCCCTGTCCTATGATCCTATCTACTTGTTGATCCTTTCAGCACTTATAATAATGAAATTACAGGTCATGGTCATGACACCACAGGTGTTCCTACAAGCTTTACGCAATGCTTTCTTGATCTTGGACAAGGTTAGTCTCATGATATTTTATGAATGCCATCATGCAACTGGAAACCACCCTTATACTTGTAATGAAGGTATTGTGAAATACCATCTTATCATGTTTTTTTTTTGTTTTGACACTACCATGAATATTTGCATTCAGGTTTTTCTTTTTTGTGTTTGTCATAAGTTATAACTTATCACAATCTCAGGAGTTCTATTACAAATCAGAACATAAGCCAAGTGTGTTTGGTATGACAGCATCACCTGTTATAAGAAAAGGGAAGTATTCAGTTTTCTGCAAGAACTATATAGAATGCTTCTTCTTCTTTTCTTTTGTGAGTGGGTGGGTAGGTGCCCGGGGGGCTCGATGGAGGATGGGATGTTAAACCTCATTTGTTTCAACTCTGGTTGAGAGATGCATAAGTTAGAGAAGATCAGCAATAAATTTCTTGTAAACAGTAGCATTTAGGATATGTGTTAATTCTGACCTGCCATCCCAGAGAAATATCCAGGAACAATGATCACGCACATATTCTCCAGTTTCACTTTGGCCATAGAGTTCATAAATGCCAATATTTCTGGCAGATTTGATTTATTCCCATCACTTAGTAAATCTTATTGGATGATTTGAGTTTTTCATGGTTGTCTTTGCAGGTGTCTCTTCTCATTTGGATTGTGAAGGTCAATTCTGTGAATTGGAAAACCTGTTAGATGCCAAGGTATGTTCAGTTTCCTTTTCTGCCACACATATTATATGAATAAGCTGGGTTAGATTATACAGGACATGTTAGTTCTGATTACTACACGATTCTACTTTGTCTATTGAACTGCAAGGATATATACGTACCTGAATTCCAGTTATTGACAGATTGTAGTTTTCAACCAAATGCAAATTGTTTGACTGTTGTGTTTGTTTTGAGAGCTTAGGTGATATATATCTATCTGTTCTACCCATGCCATTTTGGGATACACATATGACCCCTTTTAAAAATGTTATTCGTCTGCGTACTTTCAATCTCATCATTTTTTATCTTTAGCAGATCTACAGAGTTTCAGATAGAGAAGAGATAGAGCTTTGCGTTCCTTCTGCAAAAGAAATGTACAGATTCTATGACCCGAAAACAATTTGTTTTGAAGATTTGAGTGAAGAATTGGGAGTTTTATGTCCCAAGGTTTTCTTTATCTCTTTTTTTCTCTGCTATATTGATCGAATTTGTCATCAAAGTTTGCACCTCAGCATTTTTTATGTTTCTAAGAACACACACTTTTTTGTATATGCAGTATGATGCATTGATAACAGAGTTGCAGAATAAGCAAAGCTACATGTATGAAGATGCTGATGATATAACAAAAGAATCAAGGAGACGCCTTTCTAATTTTAGCAAAAATTTGCTACTGCCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA036314