Difference between revisions of "Os01g0107000"

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(Created page with "{{JaponicaGene| GeneName = Os01g0107000| Description = Peroxisomal membrane anchor protein (Pex14p) domain containing protein| Version = NM_001185192.1 GI:297719518 GeneID:...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0107000|
 
GeneName = Os01g0107000|

Revision as of 18:42, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0107000

Description

Peroxisomal membrane anchor protein (Pex14p) domain containing protein

Version

NM_001185192.1 GI:297719518 GeneID:9268894

Length

3287 bp

Definition

Oryza sativa Japonica Group Os01g0107000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:382335..385621

Sequence Coding Region

382451..382864,382950..383020,383131..383176,383302..383333,383409..383558
,383666..383849,383934..384109,384580..384628,384724..384923
,385515..385548

Expression

GEO Profiles:Os01g0107000

Genome Context

<gbrowseImage1> name=NC_008394:382335..385621 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:382335..385621 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcccaatcttccactccctcgccgcaagatggttctggtagaggtgaattctcagacaatttggtacttcaaaccccacagccaatgcgggaggattacatacagaatgctgttaactttcttggacatccaaaagtgaagggttctccagtattttacaggcgctcttttctggaaaagaaaggccttacaaaggaagaaatcgacgaggccttccgtcgggttcctgatccacagccaaacagtacagatgttgcagctgttgcttcacaacaagccggcatcgcaaatcaatctgctggagtacaaccttacgagacagttcaagcaccacaagccattaacactggtcctatcgttccacatgcgcagccgcaacttagctggtcccgtactctcattggtgtaggtgttttcctcggagttggggctagtgctgctgtcatcctcaagaaattgtttgttcctaggctaaaatcttggatccaaggagcccatgttgaaggggatgaaatttctgggaatgaacttaaatccaagttttatgaagaaatcaaagcagccatacaagattctgcatcagcgttttctgatattgctaaaacaaaccaagagttgcttgcttcaaaggatgaagataagaagatacttacaaagttggcacaagcatttgattcgcaagcagaggcgtttagatccttgagtgattccttgaatcgtatgagtgagaataggttttaccagtacaatctaatggaggatcattttcaatctgccccatggaatgggccaactacaaattcatggagagcttctcagcaaacaaacgcatacaacacatcaccacgcagtgattttgactccgggaggcatccgttcatgccagtaccgggagaaccttcacctggagcatttccggcgagatcctatgttgagcagcagcggatgcagaggcctgggtacggatttcagcctcagatgagcaatgacaggtggaaccctggctcgccattgacgaactaccacggtgctcctccgtatcagcagtatcaccatggatccaccaacgccatcgatgaagctccagctccagctccagttccagctccagctccaccagctgaaagcccgttccagcgtcgctgggttcccccacagccaccgggcgtcgtcatgccggaggccgtggccgccatacggcagccgaggcagcaagttgcagcggcatcgagaccgtcggaatccgccgcggcgacagagcagccacagtcaggtgacgtcgccggtggcgccgccatggccaatgcgggcaatggcgaggccgagcaagagcgggaagctgctgcttaa</cdnaseq>

Protein Sequence

<aaseq>MAAQSSTPSPQDGSGRGEFSDNLVLQTPQPMREDYIQNAVNFLG HPKVKGSPVFYRRSFLEKKGLTKEEIDEAFRRVPDPQPNSTDVAAVASQQAGIANQSA GVQPYETVQAPQAINTGPIVPHAQPQLSWSRTLIGVGVFLGVGASAAVILKKLFVPRL KSWIQGAHVEGDEISGNELKSKFYEEIKAAIQDSASAFSDIAKTNQELLASKDEDKKI LTKLAQAFDSQAEAFRSLSDSLNRMSENRFYQYNLMEDHFQSAPWNGPTTNSWRASQQ TNAYNTSPRSDFDSGRHPFMPVPGEPSPGAFPARSYVEQQRMQRPGYGFQPQMSNDRW NPGSPLTNYHGAPPYQQYHHGSTNAIDEAPAPAPVPAPAPPAESPFQRRWVPPQPPGV VMPEAVAAIRQPRQQVAAASRPSESAAATEQPQSGDVAGGAAMANAGNGEAEQEREAA A</aaseq>

Gene Sequence

<dnaseqindica>2758..3171#2602..2672#2446..2491#2289..2320#2064..2213#1773..1956#1513..1688#994..1042#699..898#74..107#ctgcttctttcctccgacgactcgccgccgcctgaaatctctttcttgattcgtgcgctcctgagctaccccgatggccgcccaatcttccactccctcgccgcaaggtcaggtttttcttcccctctcttactgtctcatatcctccgaaaatcgtggcgctccccgtccaatcctttggatcaagatgacgcttttcttcagacttggaatcttggcgcttcttgctcgatgtttctatcccgccgattgttagccatataatttgggactgagtttatgagcaactcttctctttctgttgagagacgagggtttggtaattttgagggttagaacatgagaaccgccgaatcttgtaccgcgattgcctactggaataagcgtaagagtcctggctgctcatatcatcactaattctagcctcgttagcaagggcaactagcttttgaggcgattcagccaagacaagttcatgccctcttgtggttgtgggcacaagtccagtggctggctgcagtttttgctgcaaatatcgacaatttagaggtccatagcaccaaatgaatttggaaccaccggggagaaattggctattctgaaaccttgagttattatcttgttattttgttagttatagtcactcagattcccctgtcctgaaaatcgaactgcattcccatttgctcatgctgcagatggttctggtagaggtgaattctcagacaatttggtacttcaaaccccacagccaatgcgggaggattacatacagaatgctgttaactttcttggacatccaaaagtgaagggttctccagtattttacaggcgctcttttctggaaaagaaaggccttacaaaggaagaaatcgacgaggccttccgtcgggttcctgtatgatttactttctaccgcccctacatggctgtttgtatacctccaaatgaaaataagatgaaacgttcctgaaacagcttaatgtcttgtaggatccacagccaaacagtacagatgttgcagctgttgcttcacaacaaggtaccctattgctctacatgataaacatttagcactagcacagcaatgggttgcagtgatattatatcactgcgtttgtcttacttttggttgagtggattgtcctaatatagtattatgacataatagccaccaggctttgctatattgttgttggttaacttggacgcacacaacatgcagaagttttattggtttcactgagtttgctcaagtgatgatctattggcagcttcttttcttttgtttacttgattggaatgtcttattttcagctctttttcactaaattaattcaaattacatcaagattttagatctttagattggttctataaattattgtgctttgatagtagttcatatctgtgattgcaagtctgtacccaaaaatcttacaatacactgaaaaataaactctttttgttagcttgatcacttaaaggccgtgttattttctttgcttccagccggcatcgcaaatcaatctgctggagtacaaccttacgagacagttcaagcaccacaagccattaacactggtcctatcgttccacatgcgcagccgcaacttagctggtcccgtactctcattggtgtaggtgttttcctcggagttggggctagtgctgctgtcatcctcaaggtatatctcgtgaattttgcagactatcttaattttagcaagttcttgagaaattaactctatatgcgtgcatgttttgtacagaaattgtttgttcctaggctaaaatcttggatccaaggagcccatgttgaaggggatgaaatttctgggaatgaacttaaatccaagttttatgaagaaatcaaagcagccatacaagattctgcatcagcgttttctgatattgctaaaacaaaccaagagttgcttgcttcaaaggatgaaggtttcataattttccgttgatacattagcatgttttagcagaagaaatgtacaatagctatcactgtttcgggtttgatcgtcttaatgaatctcacttgtttatagataagaagatacttacaaagttggcacaagcatttgattcgcaagcagaggcgtttagatccttgagtgattccttgaatcgtatgagtgagaataggttttaccagtacaatctaatggaggatcattttcaatctgccccatggaatggttagaatcaattcttttttgttgcattggtttctttaaatctgttgctaatattgacgttatctgtctgaatagggccaactacaaattcatggagagcttctcaggtatagcttattgttatttaccccattgtgaactcattattcttatttaccctttctgtcaatacctttttttttaatctttgcatcattccgttgtagttctcattcggtttctctatttacagcaaacaaacgcatacaacacatcaccacgcagtgattttgactccggtaagtagcctccaccagaagcagcacaactttcttgtatcatcacctgagaatatttttttctgccttgcacttattttgtgtgccctctttcgtgttatctttatcagggaggcatccgttcatgccagtaccgggagaaccttcacctggagcatttccggcgagatcctatgttgaggtaggccatcgtatgatcatggattctaggtgcagtagacatgatagtattccaaaacttgatggtgtgtgagtacttatttcagcagcagcggatgcagaggcctgggtacggatttcagcctcagatgagcaatgacaggtggaaccctggctcgccattgacgaactaccacggtgctcctccgtatcagcagtatcaccatggatccaccaacgccatcgatgaagctccagctccagctccagttccagctccagctccaccagctgaaagcccgttccagcgtcgctgggttcccccacagccaccgggcgtcgtcatgccggaggccgtggccgccatacggcagccgaggcagcaagttgcagcggcatcgagaccgtcggaatccgccgcggcgacagagcagccacagtcaggtgacgtcgccggtggcgccgccatggccaatgcgggcaatggcgaggccgagcaagagcgggaagctgctgcttaattactccatttcttttttttttgtttgccacgcgatgcatgcgtctctcgtgtacaaaatacagactagtgacgattacctatgagaaaaagaagaggaacaaatgttgtgtattc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0107000, RefSeq:Os01g0107000