Difference between revisions of "Os01g0122300"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os01g0122300| Description = TRAF-like domain containing protein| Version = NM_001048417.1 GI:115434247 GeneID:4326049| Length = 918 bp| Definit...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0122300|
 
GeneName = Os01g0122300|

Revision as of 18:43, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0122300

Description

TRAF-like domain containing protein

Version

NM_001048417.1 GI:115434247 GeneID:4326049

Length

918 bp

Definition

Oryza sativa Japonica Group Os01g0122300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1263356..1264273

Sequence Coding Region

1263356..1264273

Expression

GEO Profiles:Os01g0122300

Genome Context

<gbrowseImage1> name=NC_008394:1263356..1264273 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:1263356..1264273 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggttgtggcaccggagccggaggccatcgccgtgaggatcgacatggccatgcttcactgccccatctgctttctccccttgaagcctccaatcttccaggttccttgcttgttgctgcaatgtctgatgcttcatccatttcttgtttcatggttgcattcatatgaatcgtttctttctttgtccatcgatttatgcagtgcgatgctgggcacatggcttgcagcaactgccgcggcaaggtcgccggcggccggtgccactcgtgcgaaggcgtcggcgtcggcgtcgtctacgcccgctctcgcgccatggaggccttcgtctcgtcgaccaagatccagtgcccctaccaggcgcacggctgccggagctacgtcacctactacgccgtcgacgaccaccagcgcgcgtgcccgcacgcgccgtgctcatgcccggagcccggctgcggcttcgccggctctcctggaacacctcgccgcggcgcattcctgccacgtggacaaggtcgagtacggcaaggccctgtgtctccgcgtgccggcgtctgagcggcggcggcgcctgctcgtcggggaggaggacaagcgcgtgttcctcctcgccatggccgcggtcggcgcggccagcgcggtgacgttggtgcgcgtcgcggcgagcgcggagacggcggcgcggtacaggtgcaagatgtgggcgaacgcgccggcggcggcggcggcggcggtggcgggcgcggcgagcggcaaggcggacatggtcatggtggacatggaggtggcgagcagcggcgtggcgcccggcggcgtcgccgtggaggaggcgacgttcttggccgtgccacccaagatgctgcacggggagcacaaggagatcattcttggcatttgcattgacaagaagacctcctga</cdnaseq>

Protein Sequence

<aaseq>MVVAPEPEAIAVRIDMAMLHCPICFLPLKPPIFQVPCLLLQCLM LHPFLVSWLHSYESFLSLSIDLCSAMLGTWLAATAAARSPAAGATRAKASASASSTPA LAPWRPSSRRPRSSAPTRRTAAGATSPTTPSTTTSARARTRRAHARSPAAASPALLEH LAAAHSCHVDKVEYGKALCLRVPASERRRRLLVGEEDKRVFLLAMAAVGAASAVTLVR VAASAETAARYRCKMWANAPAAAAAAVAGAASGKADMVMVDMEVASSGVAPGGVAVEE ATFLAVPPKMLHGEHKEIILGICIDKKTS</aaseq>

Gene Sequence

<dnaseqindica>1..918#atggttgtggcaccggagccggaggccatcgccgtgaggatcgacatggccatgcttcactgccccatctgctttctccccttgaagcctccaatcttccaggttccttgcttgttgctgcaatgtctgatgcttcatccatttcttgtttcatggttgcattcatatgaatcgtttctttctttgtccatcgatttatgcagtgcgatgctgggcacatggcttgcagcaactgccgcggcaaggtcgccggcggccggtgccactcgtgcgaaggcgtcggcgtcggcgtcgtctacgcccgctctcgcgccatggaggccttcgtctcgtcgaccaagatccagtgcccctaccaggcgcacggctgccggagctacgtcacctactacgccgtcgacgaccaccagcgcgcgtgcccgcacgcgccgtgctcatgcccggagcccggctgcggcttcgccggctctcctggaacacctcgccgcggcgcattcctgccacgtggacaaggtcgagtacggcaaggccctgtgtctccgcgtgccggcgtctgagcggcggcggcgcctgctcgtcggggaggaggacaagcgcgtgttcctcctcgccatggccgcggtcggcgcggccagcgcggtgacgttggtgcgcgtcgcggcgagcgcggagacggcggcgcggtacaggtgcaagatgtgggcgaacgcgccggcggcggcggcggcggcggtggcgggcgcggcgagcggcaaggcggacatggtcatggtggacatggaggtggcgagcagcggcgtggcgcccggcggcgtcgccgtggaggaggcgacgttcttggccgtgccacccaagatgctgcacggggagcacaaggagatcattcttggcatttgcattgacaagaagacctcctga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0122300, RefSeq:Os01g0122300