Difference between revisions of "Os01g0164600"

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(Created page with "{{JaponicaGene| GeneName = Os01g0164600| Description = Protein phosphatase 2C-like domain containing protein| Version = NM_001048638.1 GI:115434689 GeneID:4324414| Length ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0164600|
 
GeneName = Os01g0164600|

Revision as of 18:44, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0164600

Description

Protein phosphatase 2C-like domain containing protein

Version

NM_001048638.1 GI:115434689 GeneID:4324414

Length

3084 bp

Definition

Oryza sativa Japonica Group Os01g0164600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3331952..3335035

Sequence Coding Region

3332238..3332330,3332414..3332481,3332570..3332618,3332716..3332798,3332900..3333023
,3333389..3333486,3333555..3333634,3333712..3333782,3333872..3333953
,3334158..3334237,3334365..3334416,3334843..3334958

Expression

GEO Profiles:Os01g0164600

Genome Context

<gbrowseImage1> name=NC_008394:3331952..3335035 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:3331952..3335035 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcctcctccactgctacccgcctctcgccgcctcgcctccacgcacccactaccccttctccccatctcccgcttcgccgctcgcgcttctcccctcttcgcgccgccaagttggaagctgtgttaactattggaactcatctaataccacacccaagaaaggctgagactggcggagaagatgctttctttgtgaacggcgatgatggtggagtgtttgccgtcgcagatggagtttcaggatgggcagaaaaggatgtcaatccggctctgttttctcgagagctcatggcacacacttctacttttctcaaggatgaggaggtcaatcatgatcctcagcttcttctaatgaaggctcatgctgcaacaacttctgttggatctgcaactgtaatcattgcaatgcttgagaagacagggattctaaaaattgcaagtgtgggagattgtggtttgaaagtaattagaaaaggccaagtaatgttctctacatgtcctcaagaacattactttgactgcccataccagttaagctctgaagcaattggtcaaacgtatctggatgcactggtttgcacagtaaatcttatggagggtgatatgattgtcagtggctcagatggattttttgacaatatattcgatcaagagatcgtttctgtcatttccgagtctccaggggtagatgaagctgcaaaagcactagcagagcttgcaaggaagcattcagtggatgtcacctttgattcaccctactcaatggaggctcggagtcggggttttgatgtcccctcgtggaaaaagttcattggagggaaactaataggtggtaagatggatgacattacggttattgttgcacaggtgaaggcagtgatgatcccagatgatgagggtgttgatgaagaaaagggtcaaggggatgagcaaggcagtgctgttgccgttgcatcctctgaacagaaggaagactcaattaccacataa</cdnaseq>

Protein Sequence

<aaseq>MAASSTATRLSPPRLHAPTTPSPHLPLRRSRFSPLRAAKLEAVL TIGTHLIPHPRKAETGGEDAFFVNGDDGGVFAVADGVSGWAEKDVNPALFSRELMAHT STFLKDEEVNHDPQLLLMKAHAATTSVGSATVIIAMLEKTGILKIASVGDCGLKVIRK GQVMFSTCPQEHYFDCPYQLSSEAIGQTYLDALVCTVNLMEGDMIVSGSDGFFDNIFD QEIVSVISESPGVDEAAKALAELARKHSVDVTFDSPYSMEARSRGFDVPSWKKFIGGK LIGGKMDDITVIVAQVKAVMIPDDEGVDEEKGQGDEQGSAVAVASSEQKEDSITT</aaseq>

Gene Sequence

<dnaseqindica>2706..2798#2555..2622#2418..2466#2238..2320#2013..2136#1550..1647#1402..1481#1254..1324#1083..1164#799..878#620..671#78..193#gagcgagcgagcgattcacggtggccgcgggcgacggaggcgaggcgaggaggagatagagcagcagcaagccagccatggcggcctcctccactgctacccgcctctcgccgcctcgcctccacgcacccactaccccttctccccatctcccgcttcgccgctcgcgcttctcccctcttcgcgccgccaagtatgcctccctgcttacacctgttcgatcctcttatctttgcccttacgataagtttcagtccacgaaatgttcggttttatcgaattctcgggttcctaagacatgcgtttgattatcagtagtacttgggtcaaggtgcaaatcttaagttgtaatggagcaatgttctcactgatagtttattttttcaccgggccggcaaaagaaccggccaagttttgtattaagaaggagagagagttttacaacaagaacaccctaagccaggaatggcttaggctacagaaaatcgtctcagcgatttagactacaaacaaacacagctgctaatatatatttcagtctcactgataatttcagtctttagttatttctagtgtgcttcatctgtcagtgtttggtaatgtgagcctgtaattgtaggttggaagctgtgttaactattggaactcatctaataccacacccaagaaaggttagtcattttttagataaacatattaatatattactcttctggtagtgtttttttccccttcatactcaattatacaacagaagcaaccattgtttgatatttgaatgttcttcaaattctgaaggctgagactggcggagaagatgctttctttgtgaacggcgatgatggtggagtgtttgccgtcgcagatggagtttcagggtacaccatcttcgctgcaatgaattgttttgtacttttgtccctgaaaagaactgcttcaataaattgtagattgtgcttttgtttccttccttttaattttgggttgatttcagcacttctcaaaaaaatacatggtgttttcagcaattcgcattaacacaaggtttttatcctgctagtcattctcttgtctactgacagatgggcagaaaaggatgtcaatccggctctgttttctcgagagctcatggcacacacttctacttttctcaaggatgaggaggtatttcttaattgacatcagtactgatataaagtcacgtacactatacgtcaatttgcatatcaaataggagtttctatccatcacaggtcaatcatgatcctcagcttcttctaatgaaggctcatgctgcaacaacttctgttggatctgcaactgtgtaagcatatatctacattgttatgttagtacaactttacaggtcaaaacctaatgacttctttggaacgctaacagaatcattgcaatgcttgagaagacagggattctaaaaattgcaagtgtgggagattgtggtttgaaagtaattagaaaaggttagcatgaacaaatttatagatttcttaaagtttattagcatacttatctgttctcttcttcctaggccaagtaatgttctctacatgtcctcaagaacattactttgactgcccataccagttaagctctgaagcaattggtcaaacgtatctggatgcactggtatgtgccttattgtaggtcagaataatagagctgtgtgtgtgacgattgttttattagcatactcagttctaggtggttgcccatatgttacaacgagtccaagacatgcacattaattatttcttaatttgaaaactctatatgatctcaagtcatgcagatattttgcatgtgtggacaaatcaaaattatggggaagatcttacaagggacacgcatgcatgcgcaaatctatccataaaagataccactaatgcagtggaaacataataccaagtgcttcactacagtaatcaagatagtcgtacaagatttaagcattatttgtagaaccttctgattttgatccagttgtctaccaggtttgcacagtaaatcttatggagggtgatatgattgtcagtggctcagatggattttttgacaatatattcgatcaagagatcgtttctgtcatttccgagtctccaggggtagatgaagctggtaagtggtaaatatctcagttttgaattgggggccaccaaacacatgttccagtcctcccaaattccaatccttctgaaagtttgatgttttttccacagcaaaagcactagcagagcttgcaaggaagcattcagtggatgtcacctttgattcaccctactcaatggaggctcggagtcgggtgcgaaacatatacccctcaacaatcttttctgttcagattgttacagccaaaaagggatgacagaaatttcttcattctgatcacttgaatgcagggttttgatgtcccctcgtggaaaaagttcattggagggaaactaataggtacgcatgaactcatacacatactatcatgctctactctatgcagaacgcaaagtaatctcatgatgcctaaatttcatctatgcaggtggtaagatggatgacattacggttattgttgcacaggtgaaggcagtgatgatcccagatgatgaggtgaacctacaaaatcttccaatcttgatatgcagataaggcagtttcaccttgggattcttactgttgagtgaaatttacagggtgttgatgaagaaaagggtcaaggggatgagcaaggcagtgctgttgccgttgcatcctctgaacagaaggaagactcaattaccacataaacagtaaaatcaatgataccgcaatcacaatgtaactactgattcttcaaagcgacgttcttcgtgcgccgccattttctattttatgtcttcctccttatcttttctctaaggatgtacatttgtaagtttctactggagggaatacaactcaatcaaaatactcatgtacagccgaattccctgcagaattgagtcgctacgaatacacctctctttcatttattgctgaaaattgtgactttccttttatacaagtcacccatttacatatgcattctatctc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0164600, RefSeq:Os01g0164600