Difference between revisions of "Os01g0175500"

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(Created page with "{{JaponicaGene| GeneName = Os01g0175500| Description = Protein of unknown function DUF1618 domain containing protein| Version = NM_001048708.1 GI:115434829 GeneID:4326214| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0175500|
 
GeneName = Os01g0175500|

Revision as of 18:45, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0175500

Description

Protein of unknown function DUF1618 domain containing protein

Version

NM_001048708.1 GI:115434829 GeneID:4326214

Length

2297 bp

Definition

Oryza sativa Japonica Group Os01g0175500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3874772..3877068

Sequence Coding Region

3874865..3876285,3876647..3876662

Expression

GEO Profiles:Os01g0175500

Genome Context

<gbrowseImage1> name=NC_008394:3874772..3877068 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:3874772..3877068 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggatccccacggagacggagacggagacggggacgggggcacggattcccagccacaggcggcgcaagggatcgtccgacggttcgcgggccgtacaccggcgcaaaccaacgccgaccaaggagacggagattcccggcggccacgggcggccgaagcggtcctcctcagccctgtcgttggacggcgccggcgactccaacccaacctgggtgatcctgaatcgggtcggtgcccggagggattccttccgcggcgaccgcaccacgtcggtggcctcccgcacctccggcggcaaggagatctccgtctcgttcgagctcgcgccgccgccggagacctccctcctcaccctcgactggccgcaagggccccgcccgtcggaggggaccacatcctacccttacgtcatcgcggcgcacggcaacgtcgtgctgctcgagatcatctccaccgccaagtgccctcgccccatcgacatcgactacttcgtctacaaggccaagcccaacggggaaccctccttgacgcggctgcccgtttgctactggaagggggcttcgggcagagacaatcctcggccacgcatcatgagtagggtggccatgggtgtcctgtcctgcagcaaggattcgttcgttgtggccgagatggagagaaggtcataccaaccttctgcagctaacatctacatgtttttctccggctccgacggctggagagtcttcagggatgtgcggattgaccatatcaatggtgccggctggtggtcaactgatgcagtgttatcctaccgccgtcgctacttgatctgggtggactacttgagagggatgattgttgccaaattggcacatccaggaggaggagacccacaggagcctgctctatggtatgtaccgcttccggtcgatccggttatggggaacccttatgacagtgagcgtgggcgaggatgccctgaagcttcccgtaatgtgtgtgccacccaccatggcatcaagttcgtcaatatcatcaaccaatgtggtggcagttttagcataaccctgtggtcgtggtgcgaggacggaacatggagagaagatgcgacactggatgctgcccaactttgggacctcgattgtgaaaaccgccttccaaatgtccaaccagaattccctattgttgacatggaaaacccttacaccgtttgcttcttgttgaacgagggcaactacattgtccctgaagccacaacatggatgatcaaggtccacatgaagaagaagattctactaggttgtactagttattctaaaaatggaagcttgtctcatcagaacaccacctacatgactgccagaaggatgtctgagagactctcctttatctccagtgaaatgccatattacctgtctggacaaaccatgaaaaggaagttgataaactag</cdnaseq>

Protein Sequence

<aaseq>MRIPTETETETGTGARIPSHRRRKGSSDGSRAVHRRKPTPTKET EIPGGHGRPKRSSSALSLDGAGDSNPTWVILNRVGARRDSFRGDRTTSVASRTSGGKE ISVSFELAPPPETSLLTLDWPQGPRPSEGTTSYPYVIAAHGNVVLLEIISTAKCPRPI DIDYFVYKAKPNGEPSLTRLPVCYWKGASGRDNPRPRIMSRVAMGVLSCSKDSFVVAE MERRSYQPSAANIYMFFSGSDGWRVFRDVRIDHINGAGWWSTDAVLSYRRRYLIWVDY LRGMIVAKLAHPGGGDPQEPALWYVPLPVDPVMGNPYDSERGRGCPEASRNVCATHHG IKFVNIINQCGGSFSITLWSWCEDGTWREDATLDAAQLWDLDCENRLPNVQPEFPIVD MENPYTVCFLLNEGNYIVPEATTWMIKVHMKKKILLGCTSYSKNGSLSHQNTTYMTAR RMSERLSFISSEMPYYLSGQTMKRKLIN</aaseq>

Gene Sequence

<dnaseqindica>94..1514#1876..1891#ggccgaaaactgatcgggtggtgcggcctctctcgcctttgatttaccctttcgcgcaccaaacaccaaaccctcgccgccgccggcgccgccatgcggatccccacggagacggagacggagacggggacgggggcacggattcccagccacaggcggcgcaagggatcgtccgacggttcgcgggccgtacaccggcgcaaaccaacgccgaccaaggagacggagattcccggcggccacgggcggccgaagcggtcctcctcagccctgtcgttggacggcgccggcgactccaacccaacctgggtgatcctgaatcgggtcggtgcccggagggattccttccgcggcgaccgcaccacgtcggtggcctcccgcacctccggcggcaaggagatctccgtctcgttcgagctcgcgccgccgccggagacctccctcctcaccctcgactggccgcaagggccccgcccgtcggaggggaccacatcctacccttacgtcatcgcggcgcacggcaacgtcgtgctgctcgagatcatctccaccgccaagtgccctcgccccatcgacatcgactacttcgtctacaaggccaagcccaacggggaaccctccttgacgcggctgcccgtttgctactggaagggggcttcgggcagagacaatcctcggccacgcatcatgagtagggtggccatgggtgtcctgtcctgcagcaaggattcgttcgttgtggccgagatggagagaaggtcataccaaccttctgcagctaacatctacatgtttttctccggctccgacggctggagagtcttcagggatgtgcggattgaccatatcaatggtgccggctggtggtcaactgatgcagtgttatcctaccgccgtcgctacttgatctgggtggactacttgagagggatgattgttgccaaattggcacatccaggaggaggagacccacaggagcctgctctatggtatgtaccgcttccggtcgatccggttatggggaacccttatgacagtgagcgtgggcgaggatgccctgaagcttcccgtaatgtgtgtgccacccaccatggcatcaagttcgtcaatatcatcaaccaatgtggtggcagttttagcataaccctgtggtcgtggtgcgaggacggaacatggagagaagatgcgacactggatgctgcccaactttgggacctcgattgtgaaaaccgccttccaaatgtccaaccagaattccctattgttgacatggaaaacccttacaccgtttgcttcttgttgaacgagggcaactacattgtccctgaagccacaacatggatgatcaaggtccacatgaagaagaagattctactaggttgtactagttattctaaaaatggaagcttgtctcatcagaacaccacctacatgactgccagaaggatgtctgagagactctcctttatctccagtgaaatgccatattacctgtctggacaaaccatgaaaaggtaataatttcatgtctagtttgccaaatgcatgccatactgttcttttggttgcatgttgtacagaattttcctagtttgaagtgaattgttctgcccatttatgtttagacagcattgacgttgtggtagcttgatcagtcaagagcatgattttagatgaatataattgtggctaggatttagctatttagcagcaccaacgtttcttgctccctttaattacttggtcctgaatccctctataactcatcctatagtttatacaaaatcgatgtttgtttgcatgtttttatttcgtcttctcgacactttttctaaaaatatcactgaaccatttctgaatcttaatttcaagcaggaagttgataaactaggaatataactggagatcgaggaattgtcttaccagtttgaagattggatccatcaaacactgtgtttgcaagagcaagttcccaacactcccctctcgttttccacgcgcacgctttttaaactgctaaacaatatgtttttttaaaaaaaagtttctatacgaaagttgttttttaaaaaaatcatattgatctatttttggaaaaaaatagctaaaatacttaattaatcacacgctaatagattactccgttttccgtgcgcactgtgcatgttcccatccttccctaggatgtgagctcctgcgtctgcgtgctacagtaagttataggcaaaattggttcgatgctatataaccaattttgtcaataataaaaaggctaaaagtttatgccatagcaaacg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0175500, RefSeq:Os01g0175500