Difference between revisions of "Os01g0178200"

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(Created page with "{{JaponicaGene| GeneName = Os01g0178200| Description = Protein of unknown function DUF92, transmembrane family protein| Version = NM_001048725.2 GI:297596208 GeneID:4323868...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0178200|
 
GeneName = Os01g0178200|

Revision as of 18:45, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0178200

Description

Protein of unknown function DUF92, transmembrane family protein

Version

NM_001048725.2 GI:297596208 GeneID:4323868

Length

1947 bp

Definition

Oryza sativa Japonica Group Os01g0178200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:4063068..4065014

Sequence Coding Region

4063068..4063234,4063334..4063447,4063614..4063707,4064195..4064440,4064526..4064774
,4064883..4065014

Expression

GEO Profiles:Os01g0178200

Genome Context

<gbrowseImage1> name=NC_008394:4063068..4065014 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:4063068..4065014 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcacggcggcggaggaggcggaggagtttggatccgggcggcggtggcggtggcggcgggcggcgccatcgcggcgcgcgcggtgcggcgcaagtccgtcgactccaccgcggtgttcgtcggcgttccggccatggtggcccacaccgtcgctgggtacaggttcgcggggatgctgctggtgttcttcttcacggcgtcgcggatgacgagggtcggcgagaagaggaagcgcgcgcttgatcccgacttcaaggaaggagggcagcgcaactggtttacattcagagtggaagcttcagattttggttctgattgtagtagagtaggggaatgtggtaaatctctagaaaggcaaaatagctatctggtgcacaccactcttattggcaggaagcaagttttgtcaaacagtggcattgcaagtgtcttggtagttttgatagcacttgtcacaggagggagcgataggtgcttggatacgagagaatctagtcttgtaactgccctcattggtggtgttattggacattatgcttgctgcaatggtgatacatggtcttctgagctcggcattctcagcaaagcggaaccacgaattatcacaacattcaagagagtacggaagggtaccaatggcggggtaaccattgatggacttctcgcagcagcggctgctggattctcgattgggcttacatttgtgctactaggattcttaaccactcagtgttcttctgatgtattctggaggcagctgctggttatacccttagctacagcagctggcctatgtggaagtctgatcgattcgttgctgggcgcaacactccagtacagtgggtactgtagtcttcgtaaaaaggtggttggagtagacggtccgacggtcaccaggatttcaggacggaatatactggacaacaatggtgtcaatgtagtttctgtgttcttgactactctgatcactgcattggcgtgcgtatacatcttctga</cdnaseq>

Protein Sequence

<aaseq>MDHGGGGGGGVWIRAAVAVAAGGAIAARAVRRKSVDSTAVFVGV PAMVAHTVAGYRFAGMLLVFFFTASRMTRVGEKRKRALDPDFKEGGQRNWFTFRVEAS DFGSDCSRVGECGKSLERQNSYLVHTTLIGRKQVLSNSGIASVLVVLIALVTGGSDRC LDTRESSLVTALIGGVIGHYACCNGDTWSSELGILSKAEPRIITTFKRVRKGTNGGVT IDGLLAAAAAGFSIGLTFVLLGFLTTQCSSDVFWRQLLVIPLATAAGLCGSLIDSLLG ATLQYSGYCSLRKKVVGVDGPTVTRISGRNILDNNGVNVVSVFLTTLITALACVYIF</aaseq>

Gene Sequence

<dnaseqindica>1..167#267..380#547..640#1128..1373#1459..1707#1816..1947#atggatcacggcggcggaggaggcggaggagtttggatccgggcggcggtggcggtggcggcgggcggcgccatcgcggcgcgcgcggtgcggcgcaagtccgtcgactccaccgcggtgttcgtcggcgttccggccatggtggcccacaccgtcgctgggtacaggtgaaagggcggctaatttctcttttttttaaaaaaaatattattgataaaaaaatcctgtttctgatgtgatttttttgagacgaatcatcatcgtaggttcgcggggatgctgctggtgttcttcttcacggcgtcgcggatgacgagggtcggcgagaagaggaagcgcgcgcttgatcccgacttcaaggaaggagggcagcgcaactggtgagtaagaagatggtctctgttcttcttcttcttcttcttttcttgttccgatggtgaccaagaaaaatagagaatgatgtgaaatctgaaattaatatcgtagagatcagagaggcctcggacatgtttgagattgcgctgtggcttttggtataattggcaggtttacattcagagtggaagcttcagattttggttctgattgtagtagagtaggggaatgtggtaaatctctagaaaggcaaaatagctatctggtagaacatatatgcgatttatttgtgcaacaagggaattgagggcctcatagtgctgctatatgataaaaagttggggttcgttgagttagatttaagtgattcatgtgatgtttctgtagtgtgtacagctaccatgttcgctggctcggtatagtttaaattgtgaaaaataaaaatgagctcgatttgatgatgaagtatgtagtttgacaacatttgaaactgtttaaactgttcaaattgtccttattaacttgaggtatgcctacttcctttcaagattcaactcggaacgcaatcccatttttcatgaagtttgtcttgttgtattttctcccaaatttatccaagaggcatttttcaaaggaaaaagaatcacctatttaaaagggatccaaagtttaaggactgttgtcaccgttattgagatgaataagatgcctttcagtttcagaaagtacccttctgaatctttctaatgcaggtgcacaccactcttattggcaggaagcaagttttgtcaaacagtggcattgcaagtgtcttggtagttttgatagcacttgtcacaggagggagcgataggtgcttggatacgagagaatctagtcttgtaactgccctcattggtggtgttattggacattatgcttgctgcaatggtgatacatggtcttctgagctcggcattctcagcaaagcggaaccacgaattatcacaacattcaaggtaaacattgcattttcctcttttaccaattagagaaatatcagtacatataatcactgttgcttttgacatggaacttcaccagagagtacggaagggtaccaatggcggggtaaccattgatggacttctcgcagcagcggctgctggattctcgattgggcttacatttgtgctactaggattcttaaccactcagtgttcttctgatgtattctggaggcagctgctggttatacccttagctacagcagctggcctatgtggaagtctgatcgattcgttgctgggcgcaacactccagtacagtgggtactgtagtcttcgtaaaaaggtatggtgctttctgcaattgatgttattagatgtctatataccctagttgcctttgaatcagaagttgattttttctttttattgcttctgaattttgtttatgcaggtggttggagtagacggtccgacggtcaccaggatttcaggacggaatatactggacaacaatggtgtcaatgtagtttctgtgttcttgactactctgatcactgcattggcgtgcgtatacatcttctga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0178200, RefSeq:Os01g0178200