Difference between revisions of "Os01g0195000"

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(Created page with "{{JaponicaGene| GeneName = Os01g0195000| Description = Zinc finger, C2H2-type domain containing protein| Version = NM_001048823.1 GI:115435059 GeneID:4327319| Length = 252...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0195000|
 
GeneName = Os01g0195000|

Revision as of 18:46, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0195000

Description

Zinc finger, C2H2-type domain containing protein

Version

NM_001048823.1 GI:115435059 GeneID:4327319

Length

2526 bp

Definition

Oryza sativa Japonica Group Os01g0195000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5098555..5101080

Sequence Coding Region

5099026..5099188,5099262..5099661,5099748..5100648

Expression

GEO Profiles:Os01g0195000

Genome Context

<gbrowseImage1> name=NC_008394:5098555..5101080 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:5098555..5101080 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgctcaaggatctggccgaaattcagcagcagcagctgctcgccgccgccgaggagaacatgtcgaacctgacgtcggcgtccggcgaccaggccagcgtctcgtcccaccccgctcctcctcccgccaagaagaagcgcagcctccccggcaacccagatcctgaggcggaggtgatcgcgctgtcgccgaggacgctgatggcgacgaacaggtacgtgtgcgagatctgcgggaaagggttccagcgagaccagaacctgcagctgcaccggcgagggcacaacctgccatggaagctgaagcagcggaaccccaaggaggtggtgaggaagaaggtgtacgtgtgcccggaggccggctgcgtccaccacgacccggcgcgcgccctcggcgacctcaccggcatcaagaagcacttcagccgcaagcatggcgagaagaagtggaagtgcgacaagtgctccaagcgctacgccgtccactccgactggaaggcccactccaaggtctgcggcacccgcgagtaccgctgcgattgcggcaccctcttctcccggcgggacagcttcatcacgcacagggcgttctgcgacgcgctggcggaggagagcgcgagggcggtcacggcggcggcggcggtggcggggcagcagcagcatggcggcgggatgctcttctcgcaggtggcggatgtgcttgatcaccaggcggcgatggcgatgggggggcatgggctgatgcaagagctgtgcctcaagagggagcagcagcagcagcagcagcagttcgcgccgtcgtggctcacggcgcagcagcagcagcagcagctggaggcgatggccggcgcggggaatccggcggcgatgtacgggtcggcgaggctggaccaggagttcatcgggagctccacgccggagagcggcggcgcgcagcaggccggcctcagcttcgggttctcgtcgacgtcatccgcgccgccgcaccccgccgcctcctcggcgcacatgtccgccaccgcgctgctgcagaaggcggcgcagatgggcgcgacgctgagccgcccgtcgagccacgcccacatggcggcggcggcggcggcgagcacgcacaacagcagcagcagcgccgccaccaccaatgctccccctcctcctcctaccagcaacgtgtcgagcacttgcgtcggcgccggcggctacgggctcgccttcgaagcgtcccacttcatcgcagcagacgagagcagcaggggcgccaggtccgatcgtgacaccggcaatggcgtcgccggagccggcaacgacggcctcaccagggacttcttgggtctccgagccttctcccacggcaacataatgagcatggccggcttcgatccctgcatgtcgacgacgtcggcgtcgtcggcggcgccgtacgaccaccaccaccacagcaacaagccatggcatagctag</cdnaseq>

Protein Sequence

<aaseq>MMLKDLAEIQQQQLLAAAEENMSNLTSASGDQASVSSHPAPPPA KKKRSLPGNPDPEAEVIALSPRTLMATNRYVCEICGKGFQRDQNLQLHRRGHNLPWKL KQRNPKEVVRKKVYVCPEAGCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKRY AVHSDWKAHSKVCGTREYRCDCGTLFSRRDSFITHRAFCDALAEESARAVTAAAAVAG QQQHGGGMLFSQVADVLDHQAAMAMGGHGLMQELCLKREQQQQQQQFAPSWLTAQQQQ QQLEAMAGAGNPAAMYGSARLDQEFIGSSTPESGGAQQAGLSFGFSSTSSAPPHPAAS SAHMSATALLQKAAQMGATLSRPSSHAHMAAAAAASTHNSSSSAATTNAPPPPPTSNV SSTCVGAGGYGLAFEASHFIAADESSRGARSDRDTGNGVAGAGNDGLTRDFLGLRAFS HGNIMSMAGFDPCMSTTSASSAAPYDHHHHSNKPWHS</aaseq>

Gene Sequence

<dnaseqindica>472..634#708..1107#1194..2094#acacacacttgctcctcattcctctctcctctcctctcctctctctcatcaaccctagcttgatagttgattcaaccagccaatatattcgatctccccttctcttcttctctcgatcgatcgggtgatgagaagccaattgagaatttgagatcgttcgatcatcacctcgtttcttgctgagattatagccaagctccatgattccgtctatgccggtagtgacactgcaaggtgcacaccagtagatagctagtggcagcagcagcagcagcatcagtggagctagtcgtcgtcccggccggccttgccgtcagagatcgatcggtgtaagttacagggtgcaagtgcgatcgatcgccaccggcgcagcgagatctgattgatattgatccatcgccgatcgattgatcatacgttcagatatcataatcagcagcagctggtagaattcaagagaagttcgtccagatgatgctcaaggatctggccgaaattcagcagcagcagctgctcgccgccgccgaggagaacatgtcgaacctgacgtcggcgtccggcgaccaggccagcgtctcgtcccaccccgctcctcctcccgccaagaagaagcgcagcctccccggcaacccaggtcagcaccgaattcttcgatcgcgatcgagttaatcgaatttaggatgaactaactaactaattatgggtagatcctgaggcggaggtgatcgcgctgtcgccgaggacgctgatggcgacgaacaggtacgtgtgcgagatctgcgggaaagggttccagcgagaccagaacctgcagctgcaccggcgagggcacaacctgccatggaagctgaagcagcggaaccccaaggaggtggtgaggaagaaggtgtacgtgtgcccggaggccggctgcgtccaccacgacccggcgcgcgccctcggcgacctcaccggcatcaagaagcacttcagccgcaagcatggcgagaagaagtggaagtgcgacaagtgctccaagcgctacgccgtccactccgactggaaggcccactccaaggtctgcggcacccgcgagtaccgctgcgattgcggcaccctcttctcccggtcagtcgtctctcgtggccgccgccgccgccgccgccatggccgtcgtcggaggttctgatgatcgggttgcggtgtgggtgcaggcgggacagcttcatcacgcacagggcgttctgcgacgcgctggcggaggagagcgcgagggcggtcacggcggcggcggcggtggcggggcagcagcagcatggcggcgggatgctcttctcgcaggtggcggatgtgcttgatcaccaggcggcgatggcgatgggggggcatgggctgatgcaagagctgtgcctcaagagggagcagcagcagcagcagcagcagttcgcgccgtcgtggctcacggcgcagcagcagcagcagcagctggaggcgatggccggcgcggggaatccggcggcgatgtacgggtcggcgaggctggaccaggagttcatcgggagctccacgccggagagcggcggcgcgcagcaggccggcctcagcttcgggttctcgtcgacgtcatccgcgccgccgcaccccgccgcctcctcggcgcacatgtccgccaccgcgctgctgcagaaggcggcgcagatgggcgcgacgctgagccgcccgtcgagccacgcccacatggcggcggcggcggcggcgagcacgcacaacagcagcagcagcgccgccaccaccaatgctccccctcctcctcctaccagcaacgtgtcgagcacttgcgtcggcgccggcggctacgggctcgccttcgaagcgtcccacttcatcgcagcagacgagagcagcaggggcgccaggtccgatcgtgacaccggcaatggcgtcgccggagccggcaacgacggcctcaccagggacttcttgggtctccgagccttctcccacggcaacataatgagcatggccggcttcgatccctgcatgtcgacgacgtcggcgtcgtcggcggcgccgtacgaccaccaccaccacagcaacaagccatggcatagctagtaaccacctcggccgccatggatgaatagcgaatgaatcatgcaagcaaatccaaacaaattttgttcgtgggctactcatcgatcgttcgacaagaactgcctgatgatgatgatcatgtcaagattatttcatagctgggtaagtgagtcgaatttacccagctctctctcttttgatgttccaattgaggtttaataattcgatgttcttttgggagggtatgggctgttcaattcatatatatggaacttttcaaattatatactgttgtttatgctagctatatatcatagttaattcatcttcctactgtaataataaaatttttagccattctcagctcataaagctgtgtagagctactgccattagagctccatttgtaatcagttgttaccattaatcattcccttaaatttctagttcctg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0195000, RefSeq:Os01g0195000