Difference between revisions of "Os01g0220100"

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(Created page with "{{JaponicaGene| GeneName = Os01g0220100| Description = Similar to Cellulase| Version = NM_001048958.1 GI:115435329 GeneID:4324643| Length = 3444 bp| Definition = Oryza sa...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0220100|
 
GeneName = Os01g0220100|

Revision as of 18:46, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0220100

Description

Similar to Cellulase

Version

NM_001048958.1 GI:115435329 GeneID:4324643

Length

3444 bp

Definition

Oryza sativa Japonica Group Os01g0220100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6563677..6567120

Sequence Coding Region

6564009..6564328,6564634..6564666,6564773..6565430,6565510..6565674,6565769..6565858
,6565962..6566162,6566505..6566717,6566815..6567057

Expression

GEO Profiles:Os01g0220100

Genome Context

<gbrowseImage1> name=NC_008394:6563677..6567120 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:6563677..6567120 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctaggggaggaggagcagctggtgtgtccatggctcatcacctcggcattgccttggtggtgcttgtctttgccgccatggcgcaggtggcgcgcggcggcggcggcggccatgactatggcatggcgctgagcaagagcatcctctacttcgaggcgcagcgctccggcgtgctcccgggtagccagaggatcgcatggagggccaactccggcctcgccgacggcaaggccaacggcgtggatcttgttggtgggtactacgacgccggcgacaacgtcaagttcgggctgccgatggcgttcacggtgaccatgatggcgtggagcgtcatcgagtacggcgaggagatggcggcggccggcgagctcggccacgccgtggaggccatcaagtggggcaccgactacttcgccaaggcgcacccggagcccaacgtgctctacgctgaggtcggcgatggtgactccgaccacaactgctggcagcggccggaggacatgacgacaagccgtcaggcgtaccgccttgatcctcagaatcccggctctgacctcgccggagaaaccgccgcggccatggcggctgcgtcactcgtcttccgtagctccaacccgggctacgcagaccaactcctgcaacactctaaacagctgtttgatttcgccgacaagtaccggggaaggtacgacaacagcatcaccgtcgcgaggaactattacgggtcattcagcggatacggggatgagctactgtgggcgtcggcgtggctataccaagcgagcgacgaccgccgctacctcgactacttggccaacaacgcggatgcgctaggcgggacgggctggtccatcaaccagtttgggtgggacgtcaagtaccccggagttcaaatcctagctgcaaagtttctcctccaaggcaaagccggcgagcacgccggcgtcctgcagggataccggcggaaggcggacttcttcgcgtgctcgtgcctcgggaaggacgccgccgacaacgtcgggaggacgcccggcggaatgctgtaccaccagaggtggaacaacatccagttcgtcaccagcgcgtcgttcctcctcgccgtctactccgaccacctcgccggcggcgccgtgaggtgctcgggcggcggcggggcggtggccggggcggcggagctcctggcgttcgccaagtcgcaggtggactacatcctggggagcaacccgagggggacgagctacatggtcggctatggcgccgtctacccgcggcaggcgcaccaccgcggctcgtccatcgcctccatcagggccagcccgtcgttcgtgagctgcagggaggggtacgcgagctggtacgggcggcggggcggcaaccccaacctgctcgacggcgccgtcgtcggcggccccgacgagcacgacgacttcgccgacgagaggaacaactacgagcagacggaggcggccacctacaacaacgccccgctcatgggcatcctcgcccgtctcgccgccggccatggcgcccgcgcccgcggccggcttggccagtcacttcaacacggaatcgctgcaaatcacacttcactgcctcatggtgccaatcaccagcatgcgtcgccggtggagatcgagcagaaggcgacggcgtcgtgggagaaggacgggaggacgtaccaccggtacgcggtgacggtgagcaacaggtcgccggcgggcggcaagacggtggaggagctccacatcggcatcggcaagctgtacggcccggtgtgggggctcgagaaggcggcgaggtacggctacgtgctcccgagctggaccccgtcgctgcccgccggcgagagcgccgccttcgtctacgtccacgccgcgccgccggccgacgtctgggtcaccggctacaagctcgtctga</cdnaseq>

Protein Sequence

<aaseq>MARGGGAAGVSMAHHLGIALVVLVFAAMAQVARGGGGGHDYGMA LSKSILYFEAQRSGVLPGSQRIAWRANSGLADGKANGVDLVGGYYDAGDNVKFGLPMA FTVTMMAWSVIEYGEEMAAAGELGHAVEAIKWGTDYFAKAHPEPNVLYAEVGDGDSDH NCWQRPEDMTTSRQAYRLDPQNPGSDLAGETAAAMAAASLVFRSSNPGYADQLLQHSK QLFDFADKYRGRYDNSITVARNYYGSFSGYGDELLWASAWLYQASDDRRYLDYLANNA DALGGTGWSINQFGWDVKYPGVQILAAKFLLQGKAGEHAGVLQGYRRKADFFACSCLG KDAADNVGRTPGGMLYHQRWNNIQFVTSASFLLAVYSDHLAGGAVRCSGGGGAVAGAA ELLAFAKSQVDYILGSNPRGTSYMVGYGAVYPRQAHHRGSSIASIRASPSFVSCREGY ASWYGRRGGNPNLLDGAVVGGPDEHDDFADERNNYEQTEAATYNNAPLMGILARLAAG HGARARGRLGQSLQHGIAANHTSLPHGANHQHASPVEIEQKATASWEKDGRTYHRYAV TVSNRSPAGGKTVEELHIGIGKLYGPVWGLEKAARYGYVLPSWTPSLPAGESAAFVYV HAAPPADVWVTGYKLV</aaseq>

Gene Sequence

<dnaseqindica>2793..3112#2455..2487#1691..2348#1447..1611#1263..1352#959..1159#404..616#64..306#aagcaacactgcacagatcatccatcacctgcagcatttgccttctctggttggtgttcagccatggctaggggaggaggagcagctggtgtgtccatggctcatcacctcggcattgccttggtggtgcttgtctttgccgccatggcgcaggtggcgcgcggcggcggcggcggccatgactatggcatggcgctgagcaagagcatcctctacttcgaggcgcagcgctccggcgtgctcccgggtagccagaggatcgcatggagggccaactccggcctcgccgacggcaaggccaacggcgtacgtggagtcgttcaccattttctccgttcttgaattgcaggatgtgttctacagctccatgcatctgatctgttgattttttttcttttttcaggtggatcttgttggtgggtactacgacgccggcgacaacgtcaagttcgggctgccgatggcgttcacggtgaccatgatggcgtggagcgtcatcgagtacggcgaggagatggcggcggccggcgagctcggccacgccgtggaggccatcaagtggggcaccgactacttcgccaaggcgcacccggagcccaacgtgctctacgctgaggtcagtgcactgcattgcctttcttgcttctaccaactaacttcgagaaagcagccaagcactcgagtgcatggccactgaccgattggggtttacctggtcagatgttgcatttgcaatttgactgttttattttgctgcaaatttgtcgaaaaatgactgcaaggtcatcctctgactatttttgtctgaatttgtattgacaatgaaagaggatggcaaatcatcctctgtttttttattttggtctgaatttgtatgcttcagtgaagtagtggcattgacctgcagtggtttgcacacaatcatggtacatgattgactgaattgattccttttcaggtcggcgatggtgactccgaccacaactgctggcagcggccggaggacatgacgacaagccgtcaggcgtaccgccttgatcctcagaatcccggctctgacctcgccggagaaaccgccgcggccatggcggctgcgtcactcgtcttccgtagctccaacccgggctacgcagaccaactcctgcaacactctaaacaggtgtgacaattcaaacctgagctaactaaacaaattagaaaaaaaaaacaatacaagatcaaactatagccgaattgttcttgactttaccttgtgtgcccagctgtttgatttcgccgacaagtaccggggaaggtacgacaacagcatcaccgtcgcgaggaactattacgggtcattcagcggatacggggtgcgtcttcgacaacattgacaactacataatcgacggcggttcgccacatttttagacgattatgttaatacccatagtacattttgttcaggatgagctactgtgggcgtcggcgtggctataccaagcgagcgacgaccgccgctacctcgactacttggccaacaacgcggatgcgctaggcgggacgggctggtccatcaaccagtttgggtgggacgtcaagtaccccggagttcaaatcctagctgcaaaggtacgacaaaatatgaaatgctacagtgattaccacgttttgccggcaaaagcttcaacccaaatatgaaatgctgcagtttctcctccaaggcaaagccggcgagcacgccggcgtcctgcagggataccggcggaaggcggacttcttcgcgtgctcgtgcctcgggaaggacgccgccgacaacgtcgggaggacgcccggcggaatgctgtaccaccagaggtggaacaacatccagttcgtcaccagcgcgtcgttcctcctcgccgtctactccgaccacctcgccggcggcgccgtgaggtgctcgggcggcggcggggcggtggccggggcggcggagctcctggcgttcgccaagtcgcaggtggactacatcctggggagcaacccgagggggacgagctacatggtcggctatggcgccgtctacccgcggcaggcgcaccaccgcggctcgtccatcgcctccatcagggccagcccgtcgttcgtgagctgcagggaggggtacgcgagctggtacgggcggcggggcggcaaccccaacctgctcgacggcgccgtcgtcggcggccccgacgagcacgacgacttcgccgacgagaggaacaactacgagcagacggaggcggccacctacaacaacgccccgctcatgggcatcctcgcccgtctcgccgccggccatggcgcccgcgcccgcggccggcttggccagtcacttcaacacggtatccatcgatccatcttactcggcacatataattatttttttttacagaaatgattgcaatcagaaatcatcatttgatcaaatgcatctttgcttatatgcaggaatcgctgcaaatcacacttcactgcctcatggtaattgctcaacattgttacttcatctaatcactgagctttttactgaacttttcgctgaaatttgaccgtgaattacgcgttctatgcacagtcaaatttgttatttttgtttctactttatatgttgaatttatatttgcatgtctatgaagtgacatttcacatattgatctatcctactaatgttttttaaattttttgatgacttttaagtgacatgtaaaaatgagaggatatcttaagaagggatgatgaattgagttttactaccaattgatactgatattgtgcaaactttgcaggtgccaatcaccagcatgcgtcgccggtggagatcgagcagaaggcgacggcgtcgtgggagaaggacgggaggacgtaccaccggtacgcggtgacggtgagcaacaggtcgccggcgggcggcaagacggtggaggagctccacatcggcatcggcaagctgtacggcccggtgtgggggctcgagaaggcggcgaggtacggctacgtgctcccgagctggaccccgtcgctgcccgccggcgagagcgccgccttcgtctacgtccacgccgcgccgccggccgacgtctgggtcaccggctacaagctcgtctgaaatcaatcaaacgtgcaacgaaccattaattagttcctactaaaatttacatttacaagttcgtgtgtgcacgtttcaccagtttgtgtgcgtgtgtgagattgttaattaggtttacatgtcgagaggtaacatggagtgatgtggccagttacaatataatctcggccatcctccatgtcctgatccatgtccatgtaagatgcaaggtgtatggctagtgtttggaataatatgggttatcaatgtatcatccaggcagtagagcaggttgatgccaatggattcattgagattgcaaagcatatctatgtatttgggattaccaatcg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0220100, RefSeq:Os01g0220100