Difference between revisions of "Os01g0226500"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os01g0226500| Description = Conserved hypothetical protein| Version = NM_001049000.1 GI:115435413 GeneID:4326744| Length = 6105 bp| Definition ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0226500|
 
GeneName = Os01g0226500|

Revision as of 18:47, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0226500

Description

Conserved hypothetical protein

Version

NM_001049000.1 GI:115435413 GeneID:4326744

Length

6105 bp

Definition

Oryza sativa Japonica Group Os01g0226500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6978596..6984700

Sequence Coding Region

6978849..6979033,6979163..6979538,6979631..6979714,6979818..6979883,6980383..6980453
,6981311..6981698,6982094..6982134,6982641..6982737

Expression

GEO Profiles:Os01g0226500

Genome Context

<gbrowseImage1> name=NC_008394:6978596..6984700 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:6978596..6984700 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttccgaccaccgggtgctttcggggtcgcacccccgccgccgccgccgcagcagcagcagcatcagccatggcagtggcagccgcctttccagccgccggccgctacatccttttggcagcgggacaatgtgcgggagcatgtggggaggctgcaggaaaccatcgaattagccactgcagtgataaatgagctcgaggaaattgcgcaggctagaaactcggtcgatgctagcacgcaaggacctgactcgtcttcagcaaaattgtcatcagagcctgatggttcttctgcagataggccccggcatttcgttgagcttgctagagctatgaagattagtcaagacactcatgagtctctggccacagatgctgctaattatctttgttctcagattcagaaccttcttgcacctatttatcctgctgtgaaccaagggggtccttgggaagagaggtatgcaatgattaggttagctcagaagctgcagaaatccaagagaaataagcgatggagaaagagaaaaagaaagcatgttgcagagcttttccagaaggagcatgcagattatgacagaattgatcaggaagctgatgaatggagggctaggcaaatagccaaggacatggcgcagcgcaaggtggaaaacatgaagcagattgccaagaaaaaagcaaatgaggaaagaaagcgtctagaatctgagcttgagcttgccctaatggtcgagaaactacaggagcttcgctctatgagagttcaaaaaatgaagaaacaaggtcattttctgccagaagaagatgataaatatcttgagcgtgttaaggctgcagttgaggaagaggagcgccaagctgcaagtgctgctcggactgatgctgccaaggatgctattctgaccgcggaagagtcgaggaaggctgtgcagtgttcaaattcaagagaagatgattctgatcaagccaaaagtgcaccaacactggaacaaaaccagagagatccaggaataagcggcagaaatcatcatgcaagccaaaaaacagagcatgaacttcataaagatgacagcaaagggcatgggcattatgattctgtttccagtctgccttttgagttctaccattattatcatggaagcagctacgacatgggaacactcattgaggtccgcaggatgtgggattcctttattagagctggaggaagccgaatacctgggcactgggttcagccaccccctccagctgatgaagtatgggcatcctatttagtgcagcccaactgtccaagtaactccacttag</cdnaseq>

Protein Sequence

<aaseq>MFRPPGAFGVAPPPPPPQQQQHQPWQWQPPFQPPAATSFWQRDN VREHVGRLQETIELATAVINELEEIAQARNSVDASTQGPDSSSAKLSSEPDGSSADRP RHFVELARAMKISQDTHESLATDAANYLCSQIQNLLAPIYPAVNQGGPWEERYAMIRL AQKLQKSKRNKRWRKRKRKHVAELFQKEHADYDRIDQEADEWRARQIAKDMAQRKVEN MKQIAKKKANEERKRLESELELALMVEKLQELRSMRVQKMKKQGHFLPEEDDKYLERV KAAVEEEERQAASAARTDAAKDAILTAEESRKAVQCSNSREDDSDQAKSAPTLEQNQR DPGISGRNHHASQKTEHELHKDDSKGHGHYDSVSSLPFEFYHYYHGSSYDMGTLIEVR RMWDSFIRAGGSRIPGHWVQPPPPADEVWASYLVQPNCPSNST</aaseq>

Gene Sequence

<dnaseqindica>254..438#568..943#1036..1119#1223..1288#1788..1858#2716..3103#3499..3539#4046..4142#ctcctcctcccctctccctccgctccggcggagcgccgcgaaacgcccgccgcaaccgagcccaccgtcgaggcgatcggcggcggaggcgagggccgccgccttccgtcgcaggggtcaccttcttcgtcctcccccggtctccccctggtaagactcgatttcccctgagcctgattccgcccgttcctcgcctcaactgcagcgtggtgaactgacctaagggaggggattttgagggaagctgcccgccatgttccgaccaccgggtgctttcggggtcgcacccccgccgccgccgccgcagcagcagcagcatcagccatggcagtggcagccgcctttccagccgccggccgctacatccttttggcagcgggacaatgtgcgggagcatgtggggaggctgcaggaaaccatcgaattagccactgcagtgtgagttcctgaaccgcctaaagctagcgataatcatgcaactttgtctcaaaaccgaaggcatttcctttattgctaatttattagaccttttttttttgtggactgaaaatggaattgaattggcaggataaatgagctcgaggaaattgcgcaggctagaaactcggtcgatgctagcacgcaaggacctgactcgtcttcagcaaaattgtcatcagagcctgatggttcttctgcagataggccccggcatttcgttgagcttgctagagctatgaagattagtcaagacactcatgagtctctggccacagatgctgctaattatctttgttctcagattcagaaccttcttgcacctatttatcctgctgtgaaccaagggggtccttgggaagagaggtatgcaatgattaggttagctcagaagctgcagaaatccaagagaaataagcgatggagaaagagaaaaagaaagcatgttgcagagcttttccagaaggtgcgctcatcaatacgtttttctgtttatattgtgatcaaatcaaagtgacaactgaccataatgacatcaattgtcttgatgtttcacaggagcatgcagattatgacagaattgatcaggaagctgatgaatggagggctaggcaaatagccaaggacatggcgcagcgcaaggttctttctcatttttgaatttgtcattttgttagtggggttgttttgggtaagatacactgttgctccacagatgatcaattcattgatactgtgaaatcaggtggaaaacatgaagcagattgccaagaaaaaagcaaatgaggaaagaaagcgtctagaatctgaggtaaagttaatgcttacattgtggtgtggaaatcctgcttgtctgtggacatctgcgtggaaattgtgagcgctatgtttcattaattcattttcatacactgctgaattactatacattgtgataccttgagttatgaattttgttaagttgtagtaagcattaagttacaccattttttatctttgaccttatctgattttctacgaatttaggaaactctataagcttgcttctaaaatttcttaaagtcttgtatatttgtgtttgatatgctgcaacccaacatcttcaattacaccacctacctacctgttttctttcattcagaattattgtgcaatcagtttgtgaattcttgagtggttatttcagtatgttatatttagattccaaactattaatattctctgtagaaattgtaaattcaagagcggcaaatacaatagtcttgttttctagaaaactaattttctcaatacaaatcttctattttcagcttgagcttgccctaatggtcgagaaactacaggagcttcgctctatgagagttcaaaaaatgaagaaacaaggcaggatatattcatctacccattatttttaagaatttccttctttttatttatttcaatatatgagtccgtcaaacctatagtcataatctaaagaggtgcaaaatgtgggaaatggttaatacatgggggtcaatcttactgtaatgggtcaatcacattgtaatgcttcaagaatttgtcccttgtttaaatgattgccaaattttggcattcccattcttctctgtcatatctaatgcatttcttgccaatctgttgtccaaatgggtggtgtctgaaaacttcacaaaaatatttgctataaaattatggtaggctcgcgcgaacacactaaggccctgtttgtttcagcttatgattattataatctagattattaagccagattactataagctggattataataagctggcatagaataagctgtgagttgtttgtttgtctggattattgaaggcatggattattgggtttgaaaggctaaagtctataatgccctcagctatctgttcggttgatggcataggtgagtaatttttctcaagtatgtaggggtagtgggtctttagccactcaataatctgaaaaaagctcctctagagcagcttatcagattataataatctggcttatagattataataatctgctataattatctacttgtttgtttcagcttactcctaataagctagattataataatcctaagctgaatcaaacagggcctaaaatcacctgcaaactttgccttttccttgttaatagttatttttttcccctgttttagtacagttgatcaacctaaacacatggaactgatgcatgagttaccatgtaatatatttcaggtcattttctgccagaagaagatgataaatatcttgagcgtgttaaggctgcagttgaggaagaggagcgccaagctgcaagtgctgctcggactgatgctgccaaggatgctattctgaccgcggaagagtcgaggaaggctgtgcagtgttcaaattcaagagaagatgattctgatcaagccaaaagtgcaccaacactggaacaaaaccagagagatccaggaataagcggcagaaatcatcatgcaagccaaaaaacagagcatgaacttcataaagatgacagcaaagggcatgggcattatgattctgtttccagtctgccttttgagttctaccattattatcatggaagcagctacgacatgggaacactcattgaggtaacttatgctggcttttcaacttcatgctaccattaaggttttgtggagtgtataagaataatacagtgtaaatttgaactaggctttgcactatcagtctatcacagccaaaattctgaactaggctttacatatcaatctatcagagtcatagatatggcatggcgggtttcacacttccattgaataccataattggctcatctgggagttttgcgaatgctttatgtgttaatcagttaatgtgatttctaccaagtgaatgttttaggatgatcctatcgatggtctcatatcaatgcaaatgtgcaattactcaatatgttttttgattgggaattactcaatagattcactcagccatcatgtatgtattccacctttgattgcaggtccgcaggatgtgggattcctttattagagctggaggaaggtatgactttcactctgctaaatataatatgcaaactaaattcgctcaacaagcatctttgccatacaacaaaaaacaatggaaatatattttgctgattctctgaagaactaataccaagatgagaaaaaaagaactcatgagaatatataatgttctattgatttgggttatatatgaggtttatgccataggaaagtgcaatctcttttagtaaacagaatgatggttgttggatacattcgaagtttgttgggctacttgtatagtactctggaacgctttcttgtaatttcagtactgggatagcattatagtgctgaatgtcctgtggttctttcaagccatctactaataacttatggtagcattcatgttattttattgaagtgctctgatgataggatttagtacattgtgctctcgattgtagtgctttaccatgtgaaacgaattctatgtagcattctcttatttaacaatgcaattgtctcacctgcctgcagccgaatacctgggcactgggttcagccaccccctccagctgatgaagtatgggcatcctatttagtgcagcccaactgtccaagtaactccacttagctgtaatgaatttaatcttcttctgcctaaccactggaagttttcaaggttatcacaaggcaagtaggtgtttgagttgctactttttccccttcatgtcaactattaatgcagaaatttgatttaatatgtagccaattgcattgatgaaaattaaattgactaagcaaagttcaattgcttgcactatgaaccctcagttaaacacttaattatcttatggtttcacatgagttatccaatataaggccctgtgagtttcttcaccagcataaacactaaaaaaaatattacgaagaaattgtgttccggtctatgctttttccaggatgtctttttgcacatccatgatacgctccacttatggtctgaaaattttaatcaattttgttgactgtggggcaagattgatactgtcagtgacccagtcctgaacttctgataagtgataaccacttctgcagtcttgagtcaccattgtagttcaaatgtgttgctttgtaagttctatgtaatcaagtactaaacattggaaacaccattaaacttctttgccttctctaaagagaacttattgtagttcatgccaaggaccaaattggatgtatacaattcagccttgcgaactcgttttatattcggaatcaagaaaaaatgaagaaaaatgctagaatgggcatcccttttctgataatggtatgcagacatggtggaggcttttctatgtgatgattactggccacaggtccttttctgatctgttgagtagttcatgacaactaccagatcgtgactcaaaatcaatgggattttacatattagatcaaccagtgttgttcctatccactgctctaattgttacgaatgcatggagacatcatgttatacttatgtacccatctgttcttatggtgttgaactgaacgtacaaaactattgtaggctgttgcttagactgtaagctatatattcaacaggctggtgatataccttgaataaatgttaggaatcgtttgcccccttcctaatgatattccatagtaacctgcatcatgaatcaccacctgagaaatgaatagcttagcatatgagctataatgtttcagcatttgatcaaactcccagttcagcccaagattatcttgaaatctaaaacactgttgtatgaaaattacatattcataacataaccttagtattaattatagttatagtgtttattcagttagtaccacaataccagttaaattttaccctatatatctctttaatatgaggttttcattgaatatttatctacgatgcaatcggtcctgagagcactttaaaaaaatatatatgttctactttgtttaaagtttctgagaagctttgtgtttgttggatcagataccctggtgaagatttaaaccgaggaatgttttggattcaattttctgagtaagataggactaagaagtggaccggcaaatctagacttggaactgtatctagcaatagtcaacagatacgagcaaataacttcataacatgatagcttagatgaatagcggatttgttctttagcttatcatttcaatacattttattcatactgagtgcttgaccatttctatctccatgcattacttttccagcagctgcattttgggactattggttaggacttcagcttttcccctatgatgagccatatagatggccccgagaaaaagatggccaacgaaaaaatcgtggacaccattaggagaaaacaagaggttagtgaattggatggcattagcacccagtactatatatctctataatagagtaataaggacacggcataatgcctgctgcctttcttgttgtgcttgcttgctcctcccattttcttatctctttgaggtgattagtgattacacagaccaacaactgaatcctaaagctcgtaatgacaaatttgatgatacttgcaatt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0226500, RefSeq:Os01g0226500