Difference between revisions of "Os01g0227200"

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(Created page with "{{JaponicaGene| GeneName = Os01g0227200| Description = Similar to Somatic embryogenesis receptor kinase-like protein| Version = NM_001049004.1 GI:115435421 GeneID:4327179| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0227200|
 
GeneName = Os01g0227200|

Revision as of 18:47, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0227200

Description

Similar to Somatic embryogenesis receptor kinase-like protein

Version

NM_001049004.1 GI:115435421 GeneID:4327179

Length

4823 bp

Definition

Oryza sativa Japonica Group Os01g0227200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:7037083..7041905

Sequence Coding Region

7037364..7037775,7038427..7038942,7039487..7039573,7039678..7039748,7040128..7040204
,7040360..7040507,7040953..7041114,7041354..7041674

Expression

GEO Profiles:Os01g0227200

Genome Context

<gbrowseImage1> name=NC_008394:7037083..7041905 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:7037083..7041905 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtcgccgtcgtcgccgccgccggctaaccagacggcgacaccgcctccggctaaccagacggcggcgccacctccggcgagcaacaactcgtcgtcgccgccggcgccgggctctttgtctccgccctcgctgacgcctcccgcagcgccatcgcctccgtcgaccacgccctcctcgccggcggcggcggcggcggcgtcgagctcggggctgacgacgcccgtggtggtggggatcgtggtgggcggcctcgtcgtgctgctgctcgtcaccatcctgctcgtctgcctgttcaagaagaagaagcggcaccaccaccaccaccctccgccgccgccgccgccgcacctcctgcactactacggccacccgccgccgccgccgccgcccccgccgccgttcaaaggggatcactatggtggggtgtaccaaaattggcagcaaaatggtcctccacctccacctgatcatgtgctgaagaaggtgccttcgcatccttcccctccaccacctcctgctccactaaatgtacacagtggtggttctggctcaaattactccggtggcgacaacagccaacctctagtgtcacctggtgctgcattgggtttttcaaggtgtactttcacttatgaggacttgtcagcggcgaccgatggattctccgatgctaatctgctcggacagggcggttttgggtatgttcacaaaggagttctgccgaatgggacagaggttgctgtgaagcaattgagagatgggagtgggcagggagagcgtgaatttcaggcggaggttgagattatcagccgggtacatcacaagcatcttgtaacattggttggttattgcatttctggagggaagaggttgcttgtctatgagtatgttccaaacaacacattggagctccacttgcatgggagaggccgaccaaccatggaatggcctacaagattacgcattgctttgggtgctgcgaagggattggcatatcttcatgaagattgccatcctaagatcattcaccgtgacataaagtcagcaaatattcttcttgacgcgagatttgaggcaaaggtggcagatttcggacttgcaaaattgacttctgataataacactcatgtttcaaccagagtaatgggcacatttgggtaccttgcaccagagtatgcgtcttctggccagctaactgagaaatcagatgtcttttctttcggagtaatgcttcttgagctaataactggccgccgtcctgtgagatcgaaccaatcacagatggatgacagcttggttgattgggcaaggcctttaatgatgcgagcatcagatgatggcaattatgatgctttagtggatccacggctaggacaggagtacaatggtaacgagatggcgaggatgattgcttgtgcagctgcttgtgtacgccattctgcacgccgacgcccacggatgagccaggttgttcgggccttggaaggcgatgtgtcattggatgatctgaacgaaggtgttcgtcctggccatagccgattcttgggatcatacaacagcaacgagtacgacacgggccattacaatgaagacctgaagaaattcaggaagatggcatttggcagtggcaatctagagagcagccagcaaacgcagcccaccgagttcgtcccgaatcgatccgtatcaatgggggatgcgcgtcaaataccggagacggagatggagatggggagtttgaagaaagatggcgacagcaatggcaccagagacagccaagcttcatga</cdnaseq>

Protein Sequence

<aaseq>MSSPSSPPPANQTATPPPANQTAAPPPASNNSSSPPAPGSLSPP SLTPPAAPSPPSTTPSSPAAAAAASSSGLTTPVVVGIVVGGLVVLLLVTILLVCLFKK KKRHHHHHPPPPPPPHLLHYYGHPPPPPPPPPPFKGDHYGGVYQNWQQNGPPPPPDHV LKKVPSHPSPPPPPAPLNVHSGGSGSNYSGGDNSQPLVSPGAALGFSRCTFTYEDLSA ATDGFSDANLLGQGGFGYVHKGVLPNGTEVAVKQLRDGSGQGEREFQAEVEIISRVHH KHLVTLVGYCISGGKRLLVYEYVPNNTLELHLHGRGRPTMEWPTRLRIALGAAKGLAY LHEDCHPKIIHRDIKSANILLDARFEAKVADFGLAKLTSDNNTHVSTRVMGTFGYLAP EYASSGQLTEKSDVFSFGVMLLELITGRRPVRSNQSQMDDSLVDWARPLMMRASDDGN YDALVDPRLGQEYNGNEMARMIACAAACVRHSARRRPRMSQVVRALEGDVSLDDLNEG VRPGHSRFLGSYNSNEYDTGHYNEDLKKFRKMAFGSGNLESSQQTQPTEFVPNRSVSM GDARQIPETEMEMGSLKKDGDSNGTRDSQAS</aaseq>

Gene Sequence

<dnaseqindica>282..693#1345..1860#2405..2491#2596..2666#3046..3122#3278..3425#3871..4032#4272..4592#acgtcgcgtcgccagtagactccactggggacggtgtgggtggtggtggtagtagtagttctcgcccccctcaggtcgcaatccgctccaattccccaccaccaccatcaccaccgccgcgagggagaaaaagctcttgcctgctcttttcttggctccgctttgttcttgctctcatcttgctcgtggcgtggtagtcttcgactcgttctttttgttgttgttgttgttgtggtggtggtggtggtggtagtgcgtgagtgagtgagtgagtggtggcgatgtcgtcgccgtcgtcgccgccgccggctaaccagacggcgacaccgcctccggctaaccagacggcggcgccacctccggcgagcaacaactcgtcgtcgccgccggcgccgggctctttgtctccgccctcgctgacgcctcccgcagcgccatcgcctccgtcgaccacgccctcctcgccggcggcggcggcggcggcgtcgagctcggggctgacgacgcccgtggtggtggggatcgtggtgggcggcctcgtcgtgctgctgctcgtcaccatcctgctcgtctgcctgttcaagaagaagaagcggcaccaccaccaccaccctccgccgccgccgccgccgcacctcctgcactactacggccacccgccgccgccgccgccgcccccgccgccgttcaaaggtgagatggagatggacacctctaaattcctactacttgccttgtcccagaggagatatacagatcttctgtttcctttttgtctcactagcaacacagctgcaagacgttgctatcaactgaaaattttgctaaattgctgtcatggtaaatgttttttttggatttattgaaaaattttgaaggacttattcttgtttgttatgggatggaagaacatatcgttaggcaaaaaaacacaggatgtaggttttggtgtggattgtgctaagtttaccatggatggagtagtggtgttgtggattatcagttcatcacttgtgttgagataacacaaaaggttaattctggaaagaaagtgacaagacctgacatggtcatgtagtcctgaggttaccttacttttaagccaaatcatttggcaaacaaaaagcatgtcattttcttactttttcattctttgagttaaccatcacagagttgaatatgtttctttacatatatttaatctgtgagcaatcatctaaaaagaaacaaaaacaaatgtgcaatcaatcatatccttctcatatcattctgcattgagaaaatctatttggaatattaactatgatcggcggtcttttcagtacaattcttgctgagctgcaggggatcactatggtggggtgtaccaaaattggcagcaaaatggtcctccacctccacctgatcatgtgctgaagaaggtgccttcgcatccttcccctccaccacctcctgctccactaaatgtacacagtggtggttctggctcaaattactccggtggcgacaacagccaacctctagtgtcacctggtgctgcattgggtttttcaaggtgtactttcacttatgaggacttgtcagcggcgaccgatggattctccgatgctaatctgctcggacagggcggttttgggtatgttcacaaaggagttctgccgaatgggacagaggttgctgtgaagcaattgagagatgggagtgggcagggagagcgtgaatttcaggcggaggttgagattatcagccgggtacatcacaagcatcttgtaacattggttggttattgcatttctggagggaagaggttgcttgtctatgagtatgttccaaacaacacattggagctccacttgcatggtacactctcttcttgtgatctcattctcaccgcttcttgctttatttcaaaatcctctatgtactttgtgtttaaaagataagtagcatgaacagatattaaaatgatttaatacaaatttaagatatttctctcttgctagattacagtagacaaaatacctattgcattattaagagaaataaaatcccatgaatcattacaatgcagtgaaatccctcatccttaactgttgaggaatttcatcaatgttcaatcgggcaagttcacgaatacctggaagatactatctttcatgtcacttttttcagttaaaattatcttctggggatttgtcagaatgataataaacaacatgtagtatttttttacaccaaatagaaaaaagagaaaatgctctctaggttcttcaaatgcccttttatgtaaaatccagaaacttgccttgaaacagctgtcaatctgtcatgaaatccatgttgtatacacatttggtttgtctgctcttgagcatttgttaatggctattttcacctctttcagggagaggccgaccaaccatggaatggcctacaagattacgcattgctttgggtgctgcgaagggattggcatatcttcatgaagattgtgagcgaacacccatatcactcgtttttcttttggttccattttccacttcttataggtatacatgcctattatatactgattttctctcacacactttacaggccatcctaagatcattcaccgtgacataaagtcagcaaatattcttcttgacgcgagatttgaggcaaaggtgcgctatacattttgtgttttgtttcctttctgttttagaagtgcatactgattggtaattacagtcatcaaagattttacaaatcaatatttacattgcgaacttttgattagacttaaagcacattttgtgagcaaacagtgccttccattcattggcaaggtggttttgactgttctgatgtactatggtcaactggtaatctgcctgaaggcgtacacaattttgatataggctaaacttttctgtctacctgataagtaaattcagagaaatagtagttggcatatatccaatcataattacagttatagagttgatacgcatactaccaaatagtttaatgtgtaatttgctatgtaaaactcttttacaggtggcagatttcggacttgcaaaattgacttctgataataacactcatgtttcaaccagagtaatgggcacatttgggtatgttctatctacttgtgtagcaagcatcagttcatattttcgaaaaaaaggattaatcaaaatctataataaagaatcattttttaagctagtgcattacagcatcagccgtatcaaaatcagttcccttgtaatacttttcctgcccttaggtaccttgcaccagagtatgcgtcttctggccagctaactgagaaatcagatgtcttttctttcggagtaatgcttcttgagctaataactggccgccgtcctgtgagatcgaaccaatcacagatggatgacagcttggttgattgggtaagttatttctcgaaactaattaactttattgtccacaatactttcagaggtttcgtaaaaagaaaagcaatactttcagaggttatgcaatttctttcagtatatatacttatcgttgattttacatgatgatccgttgtaattaattttatgaatacaacccaatcatatcttgaggtccatatttgaaaatttaagtaactacattctatacattactttccgcgaatctagtatccagattcagtgaagtactttgtcctttatgtttacttttggccttcgtgtacatctttctatactttagtttcttgtaccgttcatcatcctgtgaaattctacagtctagataacgagttcctcatgcctatttcctgaacatgtgttatgttctttgaaaatcttgtgtacaatcaattgattttgttcctcctacctgcaggcaaggcctttaatgatgcgagcatcagatgatggcaattatgatgctttagtggatccacggctaggacaggagtacaatggtaacgagatggcgaggatgattgcttgtgcagctgcttgtgtacgccattctgcacgccgacgcccacggatgagccaggtaccttcttgtacttcaaggttcctgttcttttctttcatcagttttcatcagcacagattcatacaagacaagaaatttcagtgcaaaatatattacttacagtggactatcagctacactagtttcacttccaatgacaaaattgattcatctgtgtaattacaggaaggcagcatatcatttttatctagtctctgaagtcctaactaccgtttgattgatgcaatgaacaacaggttgttcgggccttggaaggcgatgtgtcattggatgatctgaacgaaggtgttcgtcctggccatagccgattcttgggatcatacaacagcaacgagtacgacacgggccattacaatgaagacctgaagaaattcaggaagatggcatttggcagtggcaatctagagagcagccagcaaacgcagcccaccgagttcgtcccgaatcgatccgtatcaatgggggatgcgcgtcaaataccggagacggagatggagatggggagtttgaagaaagatggcgacagcaatggcaccagagacagccaagcttcatgagataacctcatcttccttgtttttttaggacattgcaactaccgtagcttgtaaagtcccagccttagctgaaaattctcataagttgctgacattgtttgcaacgaaccgaaattgtttggttgagatatatatagttcgagagttctcggtagctgcaattcactgcttcttttcactgaatttttcctgtgcacctttctgatctgcattacgtttttttcgcttgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0227200, RefSeq:Os01g0227200