Difference between revisions of "Os01g0254100"
(Created page with "{{JaponicaGene|
GeneName = Os01g0254100|
Description = Similar to CTV.2|
Version = NM_001049151.1 GI:115435715 GeneID:4327709|
Length = 9286 bp|
Definition = Oryza sativa...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os01g0254100| | GeneName = Os01g0254100| | ||
Revision as of 18:48, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os01g0254100 |
|---|---|
| Description |
Similar to CTV.2 |
| Version |
NM_001049151.1 GI:115435715 GeneID:4327709 |
| Length |
9286 bp |
| Definition |
Oryza sativa Japonica Group Os01g0254100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:8419975..8429260 |
| Sequence Coding Region |
8420434..8420650,8421252..8421427,8421536..8421718,8421865..8421960,8422044..8422172 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:8419975..8429260 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:8419975..8429260 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtcgtcgctcagccgggagctcgtgttcctcatcctccagttcctcgacgaggagaagttcaaggagaccgtgcacaagcttgagcaagagtcaggattcttcttcaacatgaagtactttgaagagaaggtccatgctggggagtgggatgaagtggagaaatatctttcaggtttcaccaaggtggatgacaataggtattctatgaagatattctttgagatcagaaagcagaagtatttggaagcacttgacaggcatgatagagcaaaggcagtagatattcttgttaaagatcttaaagtcttctcgacattcaacgaggagttatataaagagataacacagcttctaactcttgagaatttcagggaaaatgaacagctgtctaagtacggggataccaaatctgctcgcagtataatgctgattgagctcaaaaaacttattgaagcgaacccccttttccgggaaaagcttgttttcccaactctcaaggcatcacgccttcggactttaatcaaccaaagcttgaactggcagcatcagctttgtaagaatcctcggccaaatccagatatcaagactttgttcactgatcatacctgcactccgccaaatggagctcgtgcttcaccagtttctgtaccactggcagcggttccaaaggccggtggcacatacccaccacttacagctcatactccatttcaacctcctcctgctggtccatctttagcgggttggatggcaaatgctgctgctgctacatcatctgttccatctgctgttgtggcggcatcatcactacctgttccgccaaatcaagctgtcccaatcatgaaacgaccaactataacagactatcaaagtgcagaatctgagcaactaatgaagcgattgaggccaagtggacatggtgttgatgaggccacctatcctgcaccaattccccaacctttatggtcagtggaggatcttcccaggacagtagcttgtacattgtcacagggatctagtgtaaccagcatggattttcatccaactcggcatacactattactagttggatctaccaatggtgaaattacactttgggaggttggtatgcgtgagagactgttttcaaagcccttcaaaatttgggacattcaagcttgttcaccacaatttcagagtgtggctaaagagtcttccatatccattaaccgggttacctggagtcctgatggagacttgataggtgtcgcatttgcaaaacatttgattcatctgcatgcatatcagcaaccaaatgagacgcggcaagttctagagattgacgctcattctggagcagttaatgacatagcattctcccggccaaataagcaactttgtgttgtcacttgtggagatgataggctgataaaggtctgggatatgcatggacagaaactgttttcatttgaagggcatgaggcaccagtgtattccatctgccctcaccacaaagagagtattcagtttatcttctcaacctccctcgacgggaaaattaaggcatggctttatgatcatatgggatccagggtagattatgatgctccaggaaaatggtgtactactatgctttatagcgctgatggaactaggttgttctcatgtggaacaagtaaagatggagattcatatttagttgagtggaatgaaagtgaaggatctatcaagaggacatattctgggtttcgtaaaaagtcagctggtgttggtgtggtgcagtttgacacagctcagaatcacattttggctgctggtgaagataatcagattaagttctgggatgttgataatacaaccatgcttagctctactgaagctgacggaggcttaccgggtcttccacggttgaggttcaataaagaaggcaatcttcttgctgttactacagtggacaatgggtttaagatacttgcaaatgctgatggactcagaactttacgagcatttggaaaccgacctttcgaagcatttagatcgcaatatgaagcttcttctatgaaggtctctggtgctcctgttgttgcgggcatttctcctaatattggtcggatggatcacatcgacaggaattctcctgcaaagccatctcctataatgaatggtggtgatccagcatctagaagcatcgatataaagcctagaatttcagaagaaaggcccgataaagcaaaaccctgggagctgatggaagtcctaaatgctcagcaatgccgtgtagctacaatgccagaaactccagaccaagccagcaaggttgtcagacttctgtacacaaattctggtgttggcttgctagcacttggttccaatgccattcaaaggctgtggaaatgggctcggaatgatcaaaatccaagtgggaaggccacagccaatgtagtgccacaacattggcaaccaaacagtggtcttgtcatgcaaaatgatacagcagataccaatcctgaggatgcagttccatgcattgctctctccaagaatgattcttatgtgatgtctgcatgtggtgggaaggtttcactgtttaacatgatgacatttaaggtgatgacaacattcatgccaccacctccagcatcaacctttttagcatttcaccctcaagacaataatatcatagcaattggaatggaagattcaaccatccatatatacaatgtcagggtagatgaggtcaaaactagattgaaagggcatcaaaggaggataactggtttggccttctcaaacaacctacaaatacttgtgtcttcaggggctgatgcacagctttgtgtgtgggccaccgatacttgggaaaagaaaaaatctgttgctattcaaatgccagctgggaaaactccatcaggggatacttgggtccagtttaactctgactggagtcgtttgttagtagtacatgagactcagctagctatatatgatgcatcaaaaatggaaagaatctaccagtggatacctcaggacgctttgtcagctcccatttcacatgcatcatactcacgcaacagccagttggtttttgctgcctttaccgatggtaacataggaatttttgatgtggagaacttgagattaagatgccgaattgcacctccagcatacttatcttctgcagccataaacagcaatccatcggtctaccctcttgtcgtcgctgcacatccacaggagtcgaatcaatttgcggttgggctttcagatggatctgttaaagtgattgaacccttggagtccgaagggaagtggggaacgacgcctcccacggaaaacggggtgcccaatggcaggacgtcaacatcatcagcaactagcaacccagctgcagaccaaatccaaagatag</cdnaseq> |
| Protein Sequence |
<aaseq>MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEEK VHAGEWDEVEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDRHDRAKAVDILVKDLK VFSTFNEELYKEITQLLTLENFRENEQLSKYGDTKSARSIMLIELKKLIEANPLFREK LVFPTLKASRLRTLINQSLNWQHQLCKNPRPNPDIKTLFTDHTCTPPNGARASPVSVP LAAVPKAGGTYPPLTAHTPFQPPPAGPSLAGWMANAAAATSSVPSAVVAASSLPVPPN QAVPIMKRPTITDYQSAESEQLMKRLRPSGHGVDEATYPAPIPQPLWSVEDLPRTVAC TLSQGSSVTSMDFHPTRHTLLLVGSTNGEITLWEVGMRERLFSKPFKIWDIQACSPQF QSVAKESSISINRVTWSPDGDLIGVAFAKHLIHLHAYQQPNETRQVLEIDAHSGAVND IAFSRPNKQLCVVTCGDDRLIKVWDMHGQKLFSFEGHEAPVYSICPHHKESIQFIFST SLDGKIKAWLYDHMGSRVDYDAPGKWCTTMLYSADGTRLFSCGTSKDGDSYLVEWNES EGSIKRTYSGFRKKSAGVGVVQFDTAQNHILAAGEDNQIKFWDVDNTTMLSSTEADGG LPGLPRLRFNKEGNLLAVTTVDNGFKILANADGLRTLRAFGNRPFEAFRSQYEASSMK VSGAPVVAGISPNIGRMDHIDRNSPAKPSPIMNGGDPASRSIDIKPRISEERPDKAKP WELMEVLNAQQCRVATMPETPDQASKVVRLLYTNSGVGLLALGSNAIQRLWKWARNDQ NPSGKATANVVPQHWQPNSGLVMQNDTADTNPEDAVPCIALSKNDSYVMSACGGKVSL FNMMTFKVMTTFMPPPPASTFLAFHPQDNNIIAIGMEDSTIHIYNVRVDEVKTRLKGH QRRITGLAFSNNLQILVSSGADAQLCVWATDTWEKKKSVAIQMPAGKTPSGDTWVQFN SDWSRLLVVHETQLAIYDASKMERIYQWIPQDALSAPISHASYSRNSQLVFAAFTDGN IGIFDVENLRLRCRIAPPAYLSSAAINSNPSVYPLVVAAHPQESNQFAVGLSDGSVKV IEPLESEGKWGTTPPTENGVPNGRTSTSSATSNPAADQIQR</aaseq> |
| Gene Sequence |
<dnaseqindica>8611..8827#7834..8009#7543..7725#7301..7396#7089..7217#6836..7015#6647..6757#6412..6567#6203..6298#5954..6121#5639..5879#5430..5557#5147..5239#4972..5067#4777..4850#4631..4697#4431..4540#4147..4282#3966..4066#3129..3252#2870..3044#2600..2758#1745..1858#1433..1612#276..355#aagtgggggtggcgtggggagagagaaaagggcgagaggtctgcaacgcatcgaagaaagcgagactaaagtttctctctcctctcctctctctctctttctttctctcgcgacctcctcctccttccacatctccgtctctctctctctcatcacgaggggaggcggcggcggcgacggggaaaccctagaattcggcggggtgaagcggtgaaggcgcccgcggcagatcggagccgggaggggggtttcagcggcggcgggggggcggcgccatgtcgtcgctcagccgggagctcgtgttcctcatcctccagttcctcgacgaggagaagttcaaggagaccgtgcacaagtgcgtagcctttctccctcccctgcctctctcgctggtttcttcgttcgccggttgggttggaccgtgggctctgtttttttttgggtgattcggtgggaggttggttgggcgcaggcgactctgctttttttgggatttgtttcgcgagtgtttgtgcgtgttttttttatctatgatttttttttgcgtgatgcgtctccagattttttttttagttttgggctttgagttccatcggaaaaaaaaattcgctctgtttgatctgttaatatgcaaggaaattttttccgaagttttttttggctggtttggtcaaagtttttttcctcgtggttttctccaggatggttgttagtattttatcaatttggtcaatatcaatttttgggggaggggctctggtcatggtatttttattttattgggatagttgagggggagatttgaaatttcgagctcacatgcgcctctttttttttttcgctttgccttgttcgggaaaaaaaaacttgtctgttttttttatcccgaatcctattctctgtcggctgcttaaattcgtctgaacaattgaatctctagattcaatgtgattaagtcggtgattggttttgtcattataatcacttgtgctgtgtcgactgagccagtaattgtacatgtcatttctctggattgcatcaacaccgtcgaaataattgagaattatttacgaaaatataaccaaattttaagcaagcagtcgggcaattataacttacaaagctgttgttgaacttgtctgaacttatgttctgtactttctgtcgtttctgctcaaatttttacattgtagactttatagtggcatacggtaggttagtccgaattagagtgtccagcttgacacccgaaggtctccgtcattgcaattgagctctgctgtcactcgtttactgctcattctacgaaaagatggggaaaaaaaatccttcaactaatgttctatttccttgtcacgactattatgttggattcaatggtacatttggtctagcaaggtgtaatttcctaatatggtacattctgttttaggcttgagcaagagtcaggattcttcttcaacatgaagtactttgaagagaaggtccatgctggggagtgggatgaagtggagaaatatctttcaggtttcaccaaggtggatgacaataggtattctatgaagatattctttgagatcagaaagcagaagtatttggaagcacttgacaggtataatttcatatctgaagggaaagttcccatttcaaccaaaaaaaggacttgtgttccatccttttggcactgggtgagatataacttctactaattttcatattcatttatatattttttttgtaacaggcatgatagagcaaaggcagtagatattcttgttaaagatcttaaagtcttctcgacattcaacgaggagttatataaagagataacacagcttctaactcttgagaatttcaggttcttacttcatcttgccttgtattttctgttgactgttgtgcgagtgtgttgataggcttgctagttgaattttgcattattagggttctttagattattcctttatctgaacaatgacaccaaagaaatgtataatgtgttgacagagacaatgagctgttgatgtttcttgaattgatttttttagttaccacttaccaggtaatggtggtttagttgtgctcatggatcattcatatcttcacactgctgatcaggacatgaaagcatttccttagagcgatatacttcatgagcattttaagtttccacttggtgcagctgtgacttgcaataagtttgccatcacggagaactaaagtagggcatggattcttcttttttcttttttttgatagaacatgaaattgaatgtgtagttgagtgcgccctccagtacagaagctacacaaacctgctctgataatcgagttgtagttactttgagttaggcattttggagttttaagttatgagtgaatacattttccttttggaaagagcttctagtaagagtttactgccactactttgttaattgcctttgaattaacaaaaattgtggaattacttgttctgcttttaacagcacttcccatgccttttttaatcaacctactgtgcttcatactatcatgttcttagcttcctattgccataaaactgtcaaattatcaactatctgttgttttcttgcagggaaaatgaacagctgtctaagtacggggataccaaatctgctcgcagtataatgctgattgagctcaaaaaacttattgaagcgaacccccttttccgggaaaagcttgttttcccaactctcaaggcatcacgccttcggactttaatcaaccaaaggtttgggaagacaatatactattgctatttgttacattatatgacctgtttgagtgttcactgtgattttctgttatatgtgagttcataattctatgacgacatttgcagcttgaactggcagcatcagctttgtaagaatcctcggccaaatccagatatcaagactttgttcactgatcatacctgcactccgccaaatggagctcgtgcttcaccagtttctgtaccactggcagcggttccaaaggccggtggcacatacccaccacttacagctcatactgtatgtttgagatttaccatttcttctttgcatgattttatgaatgcctcttttcacttttactcactatatccattaatgcagccatttcaacctcctcctgctggtccatctttagcgggttggatggcaaatgctgctgctgctacatcatctgttccatctgctgttgtggcggcatcatcactacctgttccgccaaatcaaggtaagatgatacttttctgttgatatttgctaattgataatgtgagcgtttttactgttcttttattatattattctgacctaaatctgcaatatttcctactgtacaacttctttattcacactaggtattgctatttctctgatactaatattttctaattcattgcactaatgatcattgctttctgatttcacatgtctgacttaatggttattttccatatgaatttgacatgttttctcatttttttaataaagaaaataagtttaaaactgctaaataagaaaaggtgagttgggacatatactagataccccctcagtttcataatgtaagactttctagcatcacacacattcatatagatgtaaatgaatctagacatatatatgtgtctagattcattaacatctatatgaatgtgggtgatgctagaaagtcttacattatgaaacggaggaagtaattctgttggcccatagaatacggttacaggcatcaactattcagcaatgcggttctttggttctttgatgttttgcctaatccttctagcttgaagtacatctaacacctctaagacaaagcctaattctctttggcaacataaatgtacatgaacatttattatttctgctttgcatgtcctgatatgttgttttcttttgtcacgttctcatgacatacaacttatcgtactatttcctcagctgtcccaatcatgaaacgaccaactataacagactatcaaagtgcagaatctgagcaactaatgaagcgattgaggccaagtggacatggtgttgatgaggtaatgttgcatttgcatagaagatatatggctggtgcattttctatcaattattcaaagtcatctacgcttatgttcaggccacctatcctgcaccaattccccaacctttatggtcagtggaggatcttcccaggacagtagcttgtacattgtcacagggatctagtgtaaccagcatggattttcatccaactcggcatacactattactaggtacaatcaagctctttatgttattaaaatctatttaaaaaatatgtgcaatagtaagtacagaagtctgattctttaagcatgaatgattgaatacaacttagccaaacgatatatcattttcttatcacgcttattactttatcagttggatctaccaatggtgaaattacactttgggaggttggtatgcgtgagagactgttttcaaagcccttcaaaatttgggacattcaagcttgttcaccacaatttcaggtatttttttattgctttttatagttgatccagtacaaacatctatagttctgatcttatatgcctctttattttacctcccgtgaaaagagtgtggctaaagagtcttccatatccattaaccgggttacctggagtcctgatggagacttgataggttggtatccattttataattctgtcagtaatattgtgtttcactttatttgttgcttaggtttcctttgtggtttcaggtgtcgcatttgcaaaacatttgattcatctgcatgcatatcagcaaccaaatgagacgcggcaagttctagaggtactgcaatacttccaactgtccttaatcatatggttatagaccaaatgtcagttttataaatatcacaatactttattagttcaagtctgtcactaaacccttttattcatcatgtcagattgacgctcattctggagcagttaatgacatagcattctcccggccaaataagcaactttgtgttgtcacttgtggagatgataggctgataaaggtattagatgcttcttggatggttatcttcaattttccccctagccttggtctccttcaacttcacttttcttttgtaggtctgggatatgcatggacagaaactgttttcatttgaagggcatgaggcaccagtgtattccatctgccctcaccacaaagagagtattcaggtgggttttctgaacagaatatgatatttccagttgtggtgcttattttataagctaaacaatttcttctcaagattgaacagaggtagtatgcgtgattattaatgtgtccattcagtaaaaaaggggctgtctaatgttattaatgtcgatttcttgtgttgatgtgctattcttatgttccctgaagtttatcttctcaacctccctcgacgggaaaattaaggcatggctttatgatcatatgggatccagggtagattatgatgctccaggaaaatggtgtactactatgctttatagcgctgatggaactaggtaagcagaggtattactttcgtaccgaaagttgtctttagttattgttgttgtactaatttacttgtttttcatatgaaggttgttctcatgtggaacaagtaaagatggagattcatatttagttgagtggaatgaaagtgaaggatctatcaagaggacatattctgggtttcgtaaaaagtcagctggtgttggtgtggtgcagtttgacacagctcagaatcacattttggctgctggtgaagataatcagattaagttctgggatgttgataatacaaccatgcttagctctactgaagctgacggaggcttaccggttagtctatgttccctactgtgttaaacatttttttctcttttggtagtctaaaactgtgtacattctatcagggtcttccacggttgaggttcaataaagaaggcaatcttcttgctgttactacagtggacaatgggtttaagatacttgcaaatgctgatggactcagaactttacgagcatttggaaaccgacctttcgaagcatttagatcgcaatatgaagcttcttctatgaaggttcctgcacactctttgctgcttgttattgttgtgggtctagttttagaaaatccatgaccttgaatattgcatttacaggtctctggtgctcctgttgttgcgggcatttctcctaatattggtcggatggatcacatcgacaggaattctcctgcaaagccatctcctataatggtatggtaatccacagacgaaagatttcccaaagtttcatctgtttaatgcctctttgcttaccttactgttagcaattgaaacacaatctgacttaattatggatttaatagaatggtggtgatccagcatctagaagcatcgatataaagcctagaatttcagaagaaaggcccgataaagcaaaaccctgggagctgatggaagtcctaaatgctcagcaatgccgtgtagctacaatgccagaaactccagaccaagccagcaaggtttgatccaacttgttcttgcgtagtttgcacttctcttcatgtaatcgttcagaaggctaacaacatttatatacaggttgtcagacttctgtacacaaattctggtgttggcttgctagcacttggttccaatgccattcaaaggctgtggaaatgggctcggaatgatcaaaatccaagtgggaaggtatattactctctctttgttctttggggtttaggctaatcaagggcagcgtgtaattctgtcaattctgctaagcaggccacagccaatgtagtgccacaacattggcaaccaaacagtggtcttgtcatgcaaaatgatacagcagataccaatcctgaggatgcagttccatgcattgctctctccaagaatgattcttatgtgatgtctgcatgtggtgggaaggtttcactgtttaacatgatgacatttaaggtaaatgctcaatatcttttttggataaatacttcaaaattcaggaaattttaattatgcttccttcatgcaggtgatgacaacattcatgccaccacctccagcatcaacctttttagcatttcaccctcaagacaataatatcatagcaattggaatggaagattcaaccatccatatatacaatgtcagggtagatgaggtactgcatacataaaatttgcacatactgtaatttattgagccattgctattcatttatattgagctttattttctttccaggtcaaaactagattgaaagggcatcaaaggaggataactggtttggccttctcaaacaacctacaaatacttgtgtcttcaggggctgatgcacaggttactatagccaaaacactttattttacactttacattcattgattctgttgatggatcagtatggctgctagtttatttatctttctcaaaagaaccactcaacccttggataataataatgtcactctgtttccactttgcagctttgtgtgtgggccaccgatacttgggaaaagaaaaaatctgttgctattcaaatgccagctgggaaaactccatcaggggatacttgggtccagtttaactctgactggagtcgtttgttagtagtacatgagactcagctagctatatatgatgcatcaaaaatggaaagaatctaccaggtagctatatatgctgtatcaaaaatggatagaattcctatgttcataattgatcaaataattttgttctggtttgctaaaatctcttttttatctctcttgtttcagtggatacctcaggacgctttgtcagctcccatttcacatgcatcatactcacgcaacagccagttggtttttgctgcctttaccgatggtaacataggaatttttgatgtggagaacttgagattaagatgccgaattgcacctccagcatacttatcttctgcagccataaacaggtactcactactttacgtatgatatacgcacgaaatttacctaaggccatatgagaactagatgtgctgatacagttttaaatttcagtatctgattgtccatgtatattgctacaatatataatgtagtacgagtgtcctagcactttgacctgtaatcatcgtgcattcgtgctcaacatgtcccacccctcctctgccatgccttgagccatgactcctttctgttaggaacagtgcgatatcctaatagctaatgccatataagtctactaatcgaagtttgagatatgaggattatgattttacatgatcctgttagtcaatttaagaaggattaactggcatttttgttctaccaagttttatggcaatcttagttgccctgaaatactctgaattggtagtcttatctagagtagctagatataatatgatcaaaaacacctaatttcaagtgggaaatacataaacattatatgccaaacttttgttgacaagttttgacatttgaaaccccgctcattagaaggttgcgtattattgctatttattcctccatcgagcttcatctaaaaacatatatgtttccctgcaccagcaatccatcggtctaccctcttgtcgtcgctgcacatccacaggagtcgaatcaatttgcggttgggctttcagatggatctgttaaagtgattgaacccttggagtccgaagggaagtggggaacgacgcctcccacggaaaacggggtgcccaatggcaggacgtcaacatcatcagcaactagcaacccagctgcagaccaaatccaaagatagacgtgcatgccggttggatcttcactgtaaagcttttctaatcttttacattgacttgtttgtatgttgatgtgactaggctattgttgcatttgttggaaaagcaaacagaaaaaaaatggaatcgtaagatcaggtgtgcttgtaacttgtcggatgtttgccctagttatgaaaaggttatcttgtaatagggatagtccataaaattaggttttctcagtataactgggacgtcggatgctgtagttatctttgcttagatgcttttcaagctatacatagtttttccttccttcatgttcattttttttccccaactgttgtggtggttcggacatgaaaaggaagacggtgattgacggatgccttgaatgccgtcggatttttggtagaaagagatactagcatctacctaattgttgcataagttcgttgaaagaaaataagtttgtgtgc</dnaseqindica> 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