Difference between revisions of "Os01g0267200"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os01g0267200| Description = Similar to 26S proteasome non-ATPase regulatory subunit 14 (26S proteasome regulatory subunit rpn11)| Version = NM_00...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0267200|
 
GeneName = Os01g0267200|

Revision as of 18:48, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0267200

Description

Similar to 26S proteasome non-ATPase regulatory subunit 14 (26S proteasome regulatory subunit rpn11)

Version

NM_001049218.1 GI:115435849 GeneID:4324379

Length

3498 bp

Definition

Oryza sativa Japonica Group Os01g0267200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:9165350..9168847

Sequence Coding Region

9165434..9165560,9165638..9165815,9167236..9167317,9167887..9168063,9168154..9168321
,9168446..9168637

Expression

GEO Profiles:Os01g0267200

Genome Context

<gbrowseImage1> name=NC_008394:9165350..9168847 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:9165350..9168847 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcggctgcagcggatcttcggggcgtcggggatggggcagccgccgacggactcgccgctgctcgactcctccgagcaggtctacatctcctccctcgccctcctcaagatgctcaagcacgggcgggccggcgtgccgatggaggtgatggggctgatgctcggggagttcgtcgacgactacaccgtcagggtggtcgacgtcttcgccatgccgcagagcgggacgggcgtcagcgtcgaggccgtcgaccacgtcttccagaccaacatgctcgacatgctcaagcagaccgggagaccagaaatggtggtgggctggtatcactcccatcctggatttggatgttggctttcaggtgttgatatcaacactcagcagagttttgaagctttaaatcccagggctgttgcagttgtgatagacccaatccagagtgtcaaggggaaggtggtcattgatgcatttcgtctcattaatcctcagaccatgatgcttggccaggaaccgcgacagacaacatcaaatgttgggcatctaaacaaaccatctatccaggctcttattcacgggctgaacagacactactactccattgcaatcaattaccgcaaaaatgaactggaggagaaaatgttgcttaacttacacaaaaagaaatggaccgatggattgattttgaagagttttgacactcattcgaaaaccaatgagcagactgttcaggaaatgctgaacctagccatcaaatataacaaggcagtgcaggaggaggatgagctgccacctgagaaactagcgattgccaatgtgggacggcaggatgccaagaagcacttggaagagcatgtctcaaatttgatgtcgtcaaacatagttcagaccctaggaaccatgctcgacacggttgtgttctag</cdnaseq>

Protein Sequence

<aaseq>MERLQRIFGASGMGQPPTDSPLLDSSEQVYISSLALLKMLKHGR AGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR PEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRL INPQTMMLGQEPRQTTSNVGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNL HKKKWTDGLILKSFDTHSKTNEQTVQEMLNLAIKYNKAVQEEDELPPEKLAIANVGRQ DAKKHLEEHVSNLMSSNIVQTLGTMLDTVVF</aaseq>

Gene Sequence

<dnaseqindica>85..211#289..466#1887..1968#2538..2714#2805..2972#3097..3288#gcagtcgcagcctctttcctcctccgtctctctctcccctcttcctctcctccgcgcggcgaacgaagcgagcgagcggcggccatggagcggctgcagcggatcttcggggcgtcggggatggggcagccgccgacggactcgccgctgctcgactcctccgagcaggtctacatctcctccctcgccctcctcaagatgctcaagcacggtcagtccccctctcctcctcctcaatgatgggggatattaaggtttccgttgattttggttttgcggcgcgcgcagggcgggccggcgtgccgatggaggtgatggggctgatgctcggggagttcgtcgacgactacaccgtcagggtggtcgacgtcttcgccatgccgcagagcgggacgggcgtcagcgtcgaggccgtcgaccacgtcttccagaccaacatgctcgacatgctcaagcagaccgggaggtaatcccctcttgcccccgccgccgatctagagaaaaaaacggcggatctgttggttccctttctatctctctcccttgttcagatttggtgcgctttgcttgattaatctgcgcaggatttgcccccccccccccccgccccctctttcagggcaccttagatgagctgatcttgatacataacaactactactattttctccttcagattggtgtagatggttttgtgtatacatgcgttaattttgtaaacggtccttttattttttagataatgggaatggattacatctccggccttttcagcaggcacaaccagaattggctccattacaacacttggctcaactgactttggaaatatctactgttcatagtcatagagcagtttggggcaactcatttaggcatcacagctgaaaaaccctctaggcagtagagtaacattagtctgtgtgagcacatttttcttttattgtgtacttgtttcatgataacaaccaaattgccgttttctgcatttttttgtgggctttgtgctgtcatcacaagtcagtttgcagactgcatgcttgaatttggaagccaaagtataagtcaatgttggtaaaagctctagaatcagttgtgtttcttgctctttgatgcatccaaacattcatgtgaagagaataaggtcccaatgcaattcttctgaaggattacagtatttttacttccttgagatgttctaagcaaatcctttggatagttgacaaggtccccccaaagaaaaaaatgaatgctttgtgtaaagtttgataatatatagtgattgagttgatgttggagatagatctttgtatctatttgaacacataccactaacttgctgttcagtaacagctaggcctaccagttgtattatataatgcattggtagcaatgtcatccttatcgttgttgaattggtacattggttcacatccttatcattgttaacaccacatcgatgtctgtgcatcatagttctacggctgatattttgtatggagtacctagcaaacaagtaagttggggacagaagtacctagcagctgtgaacaccttatatacatcttatgttctaatgcgtgttgtaaataggattttggttactgggcctacttgtttgttatgctaggggaatattttagaaattgcttaagaaggaagacgctttctaaatgaacttcttctcagttttgtcgatgcatttctaggatatgttactcccaagtgctagaaaattgtttgtacagtaatactggccatggtcttatatctgtttcttttatcaacactctcagtctgatgatctagaattatttacttttatttacaccgttgtttttaggctgtttaacgtgattttgtggccacttgtgttatctttacagaccagaaatggtggtgggctggtatcactcccatcctggatttggatgttggctttcaggtgttgatatcaacactcagcaggtgcatatgcttattctacctttttataagttttgttaaaaggagcaattgtttcacatttgacaaatggaaacaattgatgtgtccaaacatgtggcactgcatgcagcatgtcagttaatcaaatatctagaaataatttgatcaattgaaatgggtaaagagagtaaaaggtggcatacatttggtatcttttatgttatcttatgtttcttctgcttatcccattgtcatcaagtagttatatgcttatatcggtggtagttggtctgcaaggatggtccatactcttgaaattgactgaccatgtttcatatctacctcgagcttctgttcactaatcactagcttgttggagctgatgcatatttggtgaacagtatgaatcttatgtctaatctggggcagggatcataaaatatacaaatttaagaatactaggtggtgatttgtaaattcttccaagggttaaagcttaatttgttgcaaaatatgttgacacttatttttctatgtaaacatgcgtattgaaagtgagtatgtctaacagcttaaatggaattgtgcagagttttgaagctttaaatcccagggctgttgcagttgtgatagacccaatccagagtgtcaaggggaaggtggtcattgatgcatttcgtctcattaatcctcagaccatgatgcttggccaggaaccgcgacagacaacatcaaatgttgggcatctaaacaaaccatctatccaggtaaagttctcactattaataatactgctaccaatgaacttttgctctatcaattatctatatttgattcaaacttatttgtgttgtaaggctcttattcacgggctgaacagacactactactccattgcaatcaattaccgcaaaaatgaactggaggagaaaatgttgcttaacttacacaaaaagaaatggaccgatggattgattttgaagagttttgacactcattcgaaaaccaatgagcagactgttcaggtgcgtggcattctactttcaaccgtaccatagatgatccttcagaacaaccctttaattcatgttgcaaagtttcgtactagttagctactactagtacttatatgtgtgttttcacgtgcaggaaatgctgaacctagccatcaaatataacaaggcagtgcaggaggaggatgagctgccacctgagaaactagcgattgccaatgtgggacggcaggatgccaagaagcacttggaagagcatgtctcaaatttgatgtcgtcaaacatagttcagaccctaggaaccatgctcgacacggttgtgttctagtctccttctactgttgtgtcaaccctatacagacccccacccaaattattatttatgtttatcgaagcctctgccgtaattctgtaacttttggtgccagctacatttgggttctaacagttcgacttgaagaatttgttttcttttagcacggtgtactgttaatcttctgttgatttcgctgcattttcaaggttccatcacttgatg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0267200, RefSeq:Os01g0267200