Difference between revisions of "Os01g0319000"
(Created page with "{{JaponicaGene|
GeneName = Os01g0319000|
Description = Similar to Pectin acetylesterase (Fragment)|
Version = NM_001049421.1 GI:115436255 GeneID:4327273|
Length = 5920 bp|...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os01g0319000| | GeneName = Os01g0319000| | ||
Revision as of 18:49, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os01g0319000 |
|---|---|
| Description |
Similar to Pectin acetylesterase (Fragment) |
| Version |
NM_001049421.1 GI:115436255 GeneID:4327273 |
| Length |
5920 bp |
| Definition |
Oryza sativa Japonica Group Os01g0319000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:12259766..12265685 |
| Sequence Coding Region |
12260384..12260597,12263490..12263702,12263793..12263866,12263945..12264156,12264248..12264362 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:12259766..12265685 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:12259766..12265685 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgatgatggagaggattggggtcaccaagcttcatcatcatcttcttcttcttgttcttcttctcgtcgtcgccgccgccggcggcggcagcgtacaggcggcggaggaggatgagatgagcggccggaggaggagaagcaggcggcggcgtgcggcggacgtgatggtgcccatcaccatcctcaactccgccgtcgacaagggagccgtgtgcatggacgggacgccgccggcgtaccacctggacccgggctccggcggcggcaaccggagctgggtggtcaacctggagggcggcgggtggtgcaacaacgcccgcacgtgccgcttccgcaccgccagccgccacggctcctccgaccacatggagcgccgcatcgccttcaccggcatcatgagctccgccgccgccgacaaccccgatttccacagctggaaccgcgtcaagatccgctactgcgacagcgggtccttcgccggcgacgccttcaacgagggattgaagctgcaattccgggggcagcgcatctggggggcggtgatccagcacctgctcgacgtcggcatggcctccgccgagcatgtgctgctcaccggctgctccgccggcggcctcgccgcgatcctccactgcgaccagctccgcgccctcctccccgccgccgccaccgtcaagtgcctctccgacggcggcctcttcctcgacgccgtggacgtcgccggcggcaggagcctgaggtcatactacggcgacgtcgtcggcctgcaggcggtggcgcccaaccttcccgagacctgcaccgaccatctcgacgccacctcgtgcttcttccctcagaacataatcgacggcataaagacacccatcttcctgctgaatgcggcgtacgacgtctggcagatcgagcagagcctggcccctaacgcagctgacaccagcggcacctggcgagtctgcaagttcaaccgcgcagcctgcaacgcgtctcagctgcagttcctgcaaggtttcagagatcagatggtggcagcggtgagagtcttctccgagtcgaggagcaacgggctgttcatcaactcgtgcttcgctcactgccagtccgagctgacggccacctggaatggtggctctcctgctctccagaacaagggaattgcaaagtctgttggtgactggtactttggtcgagctgaggtgaaggccatcgattgcccctacccctgtgacaaaacatgccacaacatcatatga</cdnaseq> |
| Protein Sequence |
<aaseq>MAMMERIGVTKLHHHLLLLVLLLVVAAAGGGSVQAAEEDEMSGR RRRSRRRRAADVMVPITILNSAVDKGAVCMDGTPPAYHLDPGSGGGNRSWVVNLEGGG WCNNARTCRFRTASRHGSSDHMERRIAFTGIMSSAAADNPDFHSWNRVKIRYCDSGSF AGDAFNEGLKLQFRGQRIWGAVIQHLLDVGMASAEHVLLTGCSAGGLAAILHCDQLRA LLPAAATVKCLSDGGLFLDAVDVAGGRSLRSYYGDVVGLQAVAPNLPETCTDHLDATS CFFPQNIIDGIKTPIFLLNAAYDVWQIEQSLAPNAADTSGTWRVCKFNRAACNASQLQ FLQGFRDQMVAAVRVFSESRSNGLFINSCFAHCQSELTATWNGGSPALQNKGIAKSVG DWYFGRAEVKAIDCPYPCDKTCHNII</aaseq> |
| Gene Sequence |
<dnaseqindica>619..832#3725..3937#4028..4101#4180..4391#4483..4597#4741..4818#4978..5083#5220..5362#5523..5624#atgcctacacagtacacacagtgcgtttccattttgttctttcttccaacactttgggagagagctataccacgttgctctctcttgctttgcttgatttgcgtatcataatctttttataattcgtgctgtttaaaattttaattaggaggtgaattaaaagccgtcctcgtacgtacataaattagctggcgaatctggccagtctttaattctgccatatatgtgcatgtgtgtgtacatgtatggaaggatagtattctctccttaatttcttgaattgctatccgatcctgagcaatatatgtccctagctagctagctgggcgtccgccataatttgctgccaataataattagccccatatatccttgtagctaggtgaatcatccccttgatatgccttgttaaatatgtagctccgatttaagctctcttgcccatttttttttcagagtttatagtttcattttgattcttccgctctctgctagcttccacacaccaagttcatcagccaatttcttcctgacgagaaggccgtgtaagaattttagtgaagtgagtgtcttttttgtttttcgattggtcgatcgagtgctggtacaagctagaggatggcgatgatggagaggattggggtcaccaagcttcatcatcatcttcttcttcttgttcttcttctcgtcgtcgccgccgccggcggcggcagcgtacaggcggcggaggaggatgagatgagcggccggaggaggagaagcaggcggcggcgtgcggcggacgtgatggtgcccatcaccatcctcaactccgccgtcgacaagggagccggtatgtaattaatgtactaagatttacagtaattggatgcgttcttctgggtacgtagaatatacctgccattcagttaatttgctagtatcaatttctggcgaaagtagacaatttttttagtttttaccatttttggtcgaattttgaacaattatctatcattcgttcctaggattaaatgtgagtgtgttctaaacagggaatatttgcatcagaatagtctgaaatactacaaaattaccatgttcctaataagagtttaggttataagaccatgcggggggatggaagcagattcaattttttcaagctcgaccagagccaaagccataactaccaactaccatgacagtagtgtactaccatacgcctgcttatttatttattttttgcagtggaagatattacatttctagttcccacataaccaaatattcaaaataaagctaaacataatagtagcatagtaataaggatgggacaaacctccaacctcacgcctaccaaaacgctaaagagcacaaaatcaaatactccctccaggttaaagttaattattattttaaacagtactaatgttgaacttttaaaactttgattataaataacttttaaaacatgtactttaatttcgaaacatggaacaatatgtacaaattaatctaaactacagtacttcaatatagaatcatatatttgctgataattctacttctacatatattttttcaaggaattctatatatattatagtataaaccaatggtgaaaattgtgtgttcttgtttaaaatgacaattatattcgacttaaaaggagtaatagtttaatgctagcataaccttctattagtgtgccagctcaaggacaataattctatgttcttttaagctttttcactgggtaaaaatatacatggaaatgaatacaactattggtgacggtaaaaaaaaaaggaactagacattccaaggagcatatataaagtttgggtttatcgctttatgtaggtagtatgtactacactatcgacagtcccaaatttaagtatcggttatgtcagatttacagataaaagttaacttgtttttgggatggaggagatatacttcttcgatggaatatgcaaacttatttgcttcttgatggatagggcaccgtgcacaagtggctaagcgtgccgttcgttcccacaccatgcgtgcatatgtgtaccactagctagcaaagcaaagcaagctaagctagatgccatgcatgcatgatgcatgtatatgtccttatagcttatcccatctatccttcttgtcattctcggttcctttcacgcttctttttgcatggaggatagaggccacaccgacagaatgcatcattaccaatattcacgcttctttacttgttcatccattatatatattctttctttttctcttctcaaggtgtctaccttatatgtgcgcaccatcggatgatcagttgtagtatattcttcttaattaattccattctatattcaaacaattttctacatctaatatatataatccatatcattcatcactcctacaccaaatccagggttttcaatttcattttggaagtttctaccagggccgccaaaatttctgaatgtaaggaatttcggaaaattcagaacaaaattatttggaatttaaacatattttgaccgaatttgaatatagttgagtcaggggagagggtttctgaaatttcaaaccgtgaccgaatccatatatggtaaaagaaatcatataagatatgatataaccattatcaatatgtgaaattagaaacattgcttatgaatagtcttttagaaataactaaattatatatagtgtcacctatccttccgcgaaaataactttgtaaatccaaacccccaaaatgtagttgttatatcaaattaacctgagttagtatctttgtagagtgacatatgacaaattcaccatccaacgacctgggaggctgccaaggcttgtcaacaaacaggcgtgcctccacccctttgtccttaatcgctgcgcattccatcacacgtatgctcatttagatgggtttcaaaaaccattaaaaataatttttacaaaacaaagtagaaatattcgtgcgtataaacattatatgtataaacattatacgtacacattaactatgtgcatgaatatttaatacaacaaattatgtataaaaagtttgaatccaaatcctcaaattcgaaatgagcataaaaaatttcagtgtacaatcttttttgttgtataaattttcaatgtataaactttgtgcgtataaaatgaaaattatacgtgtcaacaaaagacaacccgacccgattgcgcgtggccgattgctaatgagccttttcgttgttagcgaacgcacagttaatggaatttgaatattattattttagggattaacaactaaattcttctaatatattgatatgcaattattttacgtgttcgaaaaaaaactaatttctctactactccctctattttaagttataagatgttttgactttggtcaaagtcaaactgtatcaagtttgaccaagtttataaaaaaaatagtaatattttttaaccaagataaatttattataaaaatatatttaattataatttaataaaactaatttagtaatataaatattaatatatttgtctatgaacttaatcaaatttaaagcagtttaactttgaccaaaatcaaaacatcttataacatgaaacggaggagggagtagcaaatactcaacatagccactggaatgatagaagccatgatctgtgttactgttaattttcaacaacaactcatgaattttcctctcatgcatgctcggtattgcagtgtgcatggacgggacgccgccggcgtaccacctggacccgggctccggcggcggcaaccggagctgggtggtcaacctggagggcggcgggtggtgcaacaacgcccgcacgtgccgcttccgcaccgccagccgccacggctcctccgaccacatggagcgccgcatcgccttcaccggcatcatgagctccgccgccgccgacaaccccggtccgtccatctcctctcctccgccgccgtctcgaactctcgatcaatcagtgtatgcatatgctaaccaaaccaaatggcaacgtacagatttccacagctggaaccgcgtcaagatccgctactgcgacagcgggtccttcgccggcgacgccttcaacgaggtgatcaatcaaacccatccagctagcagctgatccgatcattcctgattagctaagaatcaatggacttgtgtatagggattgaagctgcaattccgggggcagcgcatctggggggcggtgatccagcacctgctcgacgtcggcatggcctccgccgagcatgtgctgctcaccggctgctccgccggcggcctcgccgcgatcctccactgcgaccagctccgcgccctcctccccgccgccgccaccgtcaagtgcctctccgacggcggcctcttcctcgacgcgtacgtacttgtgttctgtccactgacgcgattatttttctccaagctagctaagcccattattcaattcttatcgcttcgcgcgttgcagcgtggacgtcgccggcggcaggagcctgaggtcatactacggcgacgtcgtcggcctgcaggcggtggcgcccaaccttcccgagacctgcaccgaccatctcgacgccacctcggtgcgtatactgcacactgtattcatgcatatgcaattaattatgtgttcatgctgatcaattcagagatgactaattagatttagatcgatgcaagaagagcattacataattatgatgcgactgtgtgtgtgaatgtgcagtgcttcttccctcagaacataatcgacggcataaagacacccatcttcctgctgaatgcggcgtacgacgtctggcaggtatgcacaagtctttgctgctgattccccatggttgatattgcaaattaaattagtaaaatctcgttctagcaaatgcatatgctcagatctaatctattgagaaatgaagaacatataaccgaatgcaaatatgtgaccggacgattcgttcatcagatcgagcagagcctggcccctaacgcagctgacaccagcggcacctggcgagtctgcaagttcaaccgcgcagcctgcaacgcgtctcagctgcagttcctgcaaggtaacaacggccatatcccttgtctgagttgtctcgttgatcatatactacgtcaataattagtttgtcagacagtaaggtgatcgaagccctgaatttcagaacccaataatccctgcatttttatgtaatgcaggtttcagagatcagatggtggcagcggtgagagtcttctccgagtcgaggagcaacgggctgttcatcaactcgtgcttcgctcactgccagtccgagctgacggccacctggaatggtggctctcctgctctccagaacaaggtactttccaccttgcttaattagtgtgtgtccatgtaattgttcagagctacaagagaaaactgcagacgttttcagtacttgcagacgaagaacctgaatgggattatgcataaaaaaatacttacttttcagtttcatgctgttcttggatgtgcagggaattgcaaagtctgttggtgactggtactttggtcgagctgaggtgaaggccatcgattgcccctacccctgtgacaaaacatgccacaacatcatatgacatcatgtactgacgtttactcgtctcgaccgaatggagtgacacacatttttgcctcgaagtcctctcaagttcttcactctagctagtagctatatacatgtagaactatcgagttcagagccaaaacatacaaaacagagaacctcacacaaacagatacaaaggaagcaaaacaaagttaacaaaagcaaataggaagggggagaggggcagggcacattaatatcgggaagcagtgtggtggagtcatgggtgtataatttcacctattaagaataaattacagtattcac</dnaseqindica> 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