Difference between revisions of "Os01g0390300"

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(Created page with "{{JaponicaGene| GeneName = Os01g0390300| Description = Nucleic acid-binding, OB-fold domain containing protein| Version = NM_001049644.1 GI:115436701 GeneID:4325229| Lengt...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0390300|
 
GeneName = Os01g0390300|

Revision as of 18:51, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0390300

Description

Nucleic acid-binding, OB-fold domain containing protein

Version

NM_001049644.1 GI:115436701 GeneID:4325229

Length

11028 bp

Definition

Oryza sativa Japonica Group Os01g0390300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:16700441..16711468

Sequence Coding Region

16700678..16700714,16700826..16700928,16701019..16701292,16701383..16701526

Expression

GEO Profiles:Os01g0390300

Genome Context

<gbrowseImage1> name=NC_008394:16700441..16711468 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:16700441..16711468 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtacgtgcttatttcagaccttatgtatggggacactgataaacggatcaaagcgagggtatctaggcaatgggactaccatgatctgaatgatgaaacaaagatctaccacactgatcttgtcttgctggatgaaaagggcaatagcatccatgttcaaatctatccacctgccatgattaagcttaggactcttctacaggaagggaaggtttactactttgactccttctctgtcagatatgcaaacagaacatataggccagttacgaaccctttgatgatctcattcactaaatggacaaccttagaagaatgcattgatgcttttgatgattttcctgccataactttttcattgacaccttttcaagacgccccgtctcttgtggacagaaatgctttctatgttgatattatgggtgtcataactgaaattggtgcaacagacactctacgcccaaaatcaagaaacacagaaactttgaaaagaacaatgcagatttgggatgcaagcaatgtcaggcaagcatccgagcacaattttcactga</cdnaseq>

Protein Sequence

<aaseq>MAYVLISDLMYGDTDKRIKARVSRQWDYHDLNDETKIYHTDLVL LDEKGNSIHVQIYPPAMIKLRTLLQEGKVYYFDSFSVRYANRTYRPVTNPLMISFTKW TTLEECIDAFDDFPAITFSLTPFQDAPSLVDRNAFYVDIMGVITEIGATDTLRPKSRN TETLKRTMQIWDASNVRQASEHNFH</aaseq>

Gene Sequence

<dnaseqindica>10755..10791#10541..10643#10177..10450#9943..10086#ccgcgtgaaagaaaaaaaaagaaaaaaccaccgccgccacgccgctctcatctctctcgctctctcctgcccgccgcctggatctgccagcgcggtggccgccgcccgctgtcctcggagcgccgtggccgccgctcgcactcctccctacgcgccctgccattcgctgctccaaggggatgttgtggatgcacggtgtcatcgctgcgccctcgctgctggcggtctcgttgctacgccgccgccgacgcccactcgaaagggaggccgtgggtgctggatgcggcagccacgatttcctttccggcggatccggtcactcagagtggagggcgagcgctagcgcagaggctcatcaatggtgtcgacgccggccgttcttccgcagtggtgagttccacagggaaagggccagctcacccaccctttctttcttcacactttccctctctctgtttaatccagatccaaactgatggggaagttcgatgtggcacatccagggctatcgggtatgctgagctcggtggtggcggcagtagcagctcggcggcgatggaggaggtcaaagcgttgatgtttgccgccggcgtggatgctgctgagtcctcgcacattggccacgacccacggctgcaatcctggtcagtttggggctttgtggttgcttgccaccctatccgtttgatctagatcgtgtggcctttgttcgtcatagtttgtgcggtgtcgtccagttgcgtttgtgaattttcgttgtgtttgacggtgggcaatgcattatcgatgcaattggtctatggctttggtgccgctggcgtgtaggccatatggttagggttggtttcatacctaccatggaatatgcctatgtaatgaggcacaactgtgcatgcttgctcagggttgtcagcttggggagtgcggttgtcagcttgggatggggcaagctgcttgctgtgattggctcaatttttctcggttgcatcggtgcctattggtgaacctggtctatatactcctcctggctgtattgtggggccttatccgatgtagtattagcgaggcctctcatggtgtatagtccagggtgtttccttcgttacgcgagatgtattaggctattccactttcaggtggggttgaatgccatggggtccatgtatgctgcttccctattggtgggtatggttggtcctattagatgtgatgcacaagtctatgccttcttctctattatatattcctttgcagatgccgggagccatcttcttttctccgcttccctttcaaagttgcaccatcgttttcatcgctctatcgttttcatcgctcttttgctgcttgcgtcctcacgtgtactacttgatacatctatttgttgttgcttttgatcattgaatatggcacggtaagatgtaggcgacattgtagtttggttgtcagcgctattcgatgtcgcttttcctgtttttaggccttctaatcattctttgatttctggcttgatttgtagagggccggatttgcacgggctgaagcggtgcttcaagggttcttgattgattttgccaaggaatgttcgggctgctggttcaatcaagcaggttaggttctttctactgtatatatatgctttaaacgatatggaaatatcccctgtatttgtggtgccttctgtttcaggtttatgtttgctaacaatctttttctgttgcgcagctctggtcacctttattggtgaccgtccctttctaccctttcttctatttctcggtcaaggcctttgtcttctgtgggtatctttcttgcgtggcatcttcttggttacattgcttctgctgcgttgtcaacacattgggtgctgtttcgtataaggtatttccatctctctcataccctatttcagtatttccttttctgtttattgattactattttgcactattttctgcttcttttcaatattgtgcatttatggtgctttgtttgtcgctatattaatagcttatttctgacacttatcacttggtacatgcgtgttgtcggtttcctatgttattgcagccatataacggtcactgcagtgccttttgtagccgttgcataggttcttgtgcacacacttctcgcatagtactctctttctctttcctgatattttgtcccttgctgcccataacgatgttgcttccctccacctcatctttagttcttatcaaagtcggctaggtttttgctttgttgtccctgaactcatcttttcttgctttagagctattattgtgaaacttcctctttccatctaatatatttgctattcacatctcgcttgtcctgctttctaaatgttgttcacaacgtttcatgcttctagctctacctccctttatccaaagtaagattaaaactgtcattcgatagtttgtaaaatgtgcatttgacgttttaatcctacatggctgcacaacttctgcacattatctctgattttttttcggagaagttagtaattatttttaaggtaagctagccatatgaagttttaaaggtataacctctattattaagcattggttctctctggtaaaaaaaaatacaactaatcaatctgcgcactgcgacctcaaaggaaaagttttgcttctcacctgtcctcgcttttatacagattaaattgaaatctaaataaacacccagtgatttgcaggatggaaaacatacacatgtatggagtttatgtgacggctaggagagtgggagagtggcacagttgcttgcaagacatcttttcccttttgaaacaaaaaaaaaaatattttatatagtgcaagatatttggtcagcgagcaaataaaaatggactagctctgcactttgattaggcctttgcttttatatataaactctttttagcattctttttgtactgctgcttcggagtgacatttctcattcagctctgcacattatctctgattttttttttcagaaaagttagtaattatttttaaggtaagctagccatatgaagttttaaaggtataacctctattattaagtattggttctctctggtaaaaaaaatacaactaatcaatctgtgcacagcgacctcaaagcaaaagttttgcttctcacctgtcctcgcttttatacagattaaactgaaatctaaataaacacccagtgatttgcaggatggaaaacatacacatgtatggagttcatatgatggctaggagagtaggagagtggcacagttgcttgcaagacatcttttcccttttgaaacaaaaaaatatatatattatatagtgcaggatatttggtcagcgagcagataaaaatggactagctttgcactttgattaggcctttgcttttatatataaactctttagcattctttttctgctgctgcttcggagtgacatttctcattgagctttcagcgctgcagttgtcaaactattaaagcgacttgatagttctgcatcatgggtagtgtgcctttagactattatgtttttttttttgccttttctgcaagcttagttcaatttttttatgaaattgtgcaagatgttaggtcagatccatgcttactattgcacaaaataattttaaggcacctcttatatctatatttaggagtatccgtcactgcagttttttgctttagtgccatactgattacttcacattaaacatgcctcgtgcatgattaatttttgtattgtgcaattagtattcagtgcttctaaaacattgcgtattgatattggagtttggcttttgatattttatttatggttgctgtataatgtgaggctattactacaacatgctcccacaatttcatcatatatggctattcattcatgatactactgcttgtctgtatatacatacgattatcttttgaatccattatgaattctggagacattcatttgctgtatatacatagggttttgtttagtttcatcttatagtgtataaagagtagaatcagctgtatagcaatttaatcatcagaccagagggaggttcaatgccctgtaaagaaacattttctcatgcatcaggcttaatgtatgtccccgcttagagtgttttctctgtttcagttttgcctcaaaagtaaaggcctagcaaattgttggaaccttagttttcaaagactttgctttccattgtgtaaagtagattttttttttacaaatttatttgagccaaactactaatatattacagttgttctctgttcaatgacagcagtagtattttaacatgagacaatgtgattaaaagaggttttgtctgtcccaaaattttggttttttgtgtttctcaaacgtctcatagcaaaagtagccaagcatgcatgcatattgtggcttgtgcattttatcctagacaaactctaggtgtttcagacttgatggttggttgaattccttaactaggctgtgcgatagtgtgctggtcaatttgacacatactaaatgttgtgatctttgatgattgatttacttttttttataggtggaagaattggtgcaagcagacttggttttattctcctcatcttcagttcaggtcctcaacaacaggtaaccaacttcccgtgctaccataaagcttcaatttaggacgttgagtgtattgcttttatgtgtgtgtattgctggtataagtgtgttgctgggatatactccccagatgtcacaacagggtataaacagggttcagagggtacgtgcaagtcgagaaagacgagctgcaaacgctttgttacgtccatctgcaatgcacatagatactaccgtagtagcatcgcctcaacctgctcgagtagatcaaggcaaaaggccacgttcccttatggatttcacgcctgaattatcaaagttacatacacagcgacgttgttcgttgcgctcaaagatgcctcctgtgccaccggcacaaaatagcaatggtatgctgaaaaggtgttttttttattgtagtatactgctgctagaactgcataacttagatatggttaaaatatttattgactgcagttgcaaataggaaagccagtggtagttcatcccagacagataaggattacattcaatctttaaagggtttgtatttttctaataaaagcaaatcattttacatttattaaggaaaaaaactgacataatcaaatatgtatgttacagcatcatacccagaacgatcgtactactgacctccgacatatgaatgcccattttgtggtgccatcttttggtatcaagagagagttaaaaccctctctgctgtctcgaaaagaaaaatagtttacaacctatgttgcaaaagtggcaaaattgaattgcctcctttatgtcctctacctgaaccgcttgcaactttattgaatttcaatggtgatgcacgttccaaaagatttttgagacaaattcgatcatataattcgatgtttgctttcacctcaatgggtgcagctattgacaagtcaattaataatgggaatgcgccttatgttttcaaaatcaatggtgttgtgcatcacagaatttgtactcttctgccatcacgaggtgcaccacctaaatttgcgcagctatatatctatgattctgacaatgaaatccaaaatcgattaaatattttcgaaaatgattgcgacaatgctgatagaccagaccctgaaattgttagcgccttaacacgcatgtttgataccaataatgaacttgttaaaaatttcagatatgctagagaccgcctctctgaacatggtaatgaaaaaataactcttcgctattaggctgcaatgctaaagatgatgtgcagtataacctaccaacaagtggtgaaatagctagcataatagtaggcgatttttcagcaaaagaatataaatttggtgtgcttgttcacgataaagatcatggaatgcatcaagtgttttcattgcatccatcatatatggctttgcagtatcctttgctatttccatatggtgaacgtggcttccatctaggcattaaatatagaaattatgatggaactggtagaaaatatgctacaatgcttgaggtctacagataccttatccattatagactaaatgagcctaatcctttcacatgttatggctgactgagtgaccaaagtgttgttgatatcttttctactatcgaggctaataggatacaatacataatagatcatcaagctgatttgcgtgctgaaactgtagaaggaatcgtagatgcgattgatagaggtgttactaatggagattctgttggcaaacgtcagatacttcctgctagctttaccggcggtagaagatatatggtgatgaattatcaggatgcgatggcaatctgtcgtgtgtatggctcgcctgatttatttgtcacattcacttgtaactttaagtggcaagaaattgcagaaactattcgatttgaacctggccaacaaccatcagatagagctgatgtaattgtgcgagtatttaacatgaaagtaaatgattttatcactgatattagagaaagtaaatgattttatcactgatattagagaaggcagaacattcggaaaagtccttgcaggtagcacatatactttcttttccatatagtttttcccctatatatttctcataccttttcattggcttaaaccttcttagtgctgtatactgtcgagttccagaagcgtgggctgccacatatccactgcttagtttggcttgcagcatccactgctgatgtgtcagcatctgtaatagatggcttcatctgtgctgagatacctgactatgacacagatcgtctaggatatgaattggttagtgagttcatgatgcatggtccttgtggcgacgcaaacaaaaattgcccttgcatgaaaaatggcaaatgttgaaaacattatcctaaggacttccaggatgaaactattattgatgaatctggttttacaatatacagacgacgaaacaatcaacgatgcataattaaaaatggaattgcattggacaacagatcagtcgtgccatacaatcttgaattgcttaaaaaatacgaagcacacattaatgttgagtggtgtaacaagtcaaatctgattaaatatttattcaaatacattacaaaagggcatgatcatgcaaagatatactttgagactacttctaagacaggaaatatgtcactaaatcatgatctagctcctcggatgagatattagaatacatggatgctagatttctttccacgtgtgaggcacttcatcgcatatttgaatttgacatacattatagagtgccacctgttgagcgtctaacagtccatttagctggcaaaaattatgttagatatgagaaatgttcagatttgcgggcggtgctcgatagccctgctgcgaaacgatcaatgctgactgaatggttcgaagctaatagaaaatattctaaggcacggttgttaacatattgtgagtttccaaaggaatggtcatgggaatcatcatctagaacatggcgcgagcgaacaccaactgcaaaaataggtcgaatctattatgtgcacccaacctgtggcgaactctattacctcagaatgctcttgatgatagttaaaggcacacagaattatgctgatgtacgcacatacaatggcattgtttataacacattcagagaagcatgtgaggcgagaggtcttcttgaaggagataatgaatgataccttctatttgatgaggccatactatctgcatcttcgcgacaacttagacaactatttgtgaccgttattctttattgctctgttagtaatgtgcgatcattatttgataagtattggctttatatgactgatgacatccatagtagattaaagaatgcattagataatccacgatgcattattccacatgagcacttgcttagtctcctcctgcatgagcttacaattgtttttgcaaacaatggtggtaatataaaagattttgatttgccgattccaacatctgcttcacacattcctggtagtaatagattgattgacgaggagcttgcacctgatccccttatgatgtccttgcgcgcagattctttaatagcacagctaaatatcgaccagaaaaagatttttgacaccataacctcctcaatcagtgcaaacaaacctggatttttctttgtgagtggacatggtgggactaggaaaacatttctatggaacgctatgattgcaaaacttagatcacaaaataagattgtgctcgctgttgcctcatcaggtgtagcatctctcctactacctagaggtagaacagctcactcccgatttaaaattccaattgacattgatgaaactagcatttgcaatataaaacgaggaactatgttgcctgacctcctcattgaaagtgcacttattatatgggatgaggctccgatgacacgtaggcactgttttgaagcattggatcgcacattacgtaacattctttctgaaacttgtcctacaaattcaatcataccttttggaggaaaacctgttgttttgggtggtgactttagacaaatcttacctgttgttcctaaaggttcacgcctcgctgttattaatgcatcaattacaaatttagacctatggaaacatgtgacgttgttatccatgaatataaacatgagactgttaaatccaaccctaccagaaaacacaataattgaattgcatgaattcagtacatgggttctagctgttggtaacggaacattgcctatgattgcaaaagaaggtgaagctcaaccctcatggattataattcccgatgatcttcttgttgtaacagatggtgacaaaatcgttgctattgtcaacgaagtgtatccagactttcttgcatcatataaaaaccctacatatctatcttctcgtgccattgtttgccctgcgaatgcagtagttgatgaaataaacaattatactattgatttactcccaggagaatcaagaatatatcttagctgtgatacaatctcaaaatgctcagagcaaattccagatttcgacctgttatacccacctgaatttcttaattcaattaatgcaactaactttcctacacacaaacttgttttaaaggaaggtgttgttgttatgcttctgcgaaatttgaaccaatcgataggcctttgtaatggaacaagattattagtcactgctttaggggaaagaattttacaatgtacaatactaactagatcaatcatcggtgaaacagtttatataccaagaatcacattaagcacgtcaaaaatgaaatggccttttacattacaaagaaggcaattcccagttcgagtttgttatgtaatgactatcaacaagagccaaggacaaacacttgagcaagttggcatatacctcaagaaacctgttttcacgcatgggcagctctatgttgctatttcaagagcaacaagccgaacagggctcaaaatactgattgaaaacgatgacggatcatgtggaaaccaaacaagaaatgttgtttataccgagatactttctgctacaatggaagcggtgtgccctcactgccatattgcatatattttatctctatatttacctacattcttggtgtcacattgggcatcatttcctattgcaggcttggccgctccatgcgtagctttccctcctcagctaattgcaatggcttttgtatataaattttggagtaaatatattgtactcacatgtagtatatgctgtatcactgctgcaccaataggctactagatttctatgtgctgttttctcacttgcttagttcattacagtgatgcttcatatttacataaactaaatatcttcaatatttatttgcagccttccaatggcgtacgtgcttatttcagaccttatgtatggggacactgataaacggatcaaagcgagggtatctaggcaatgggactaccatgatctgaatgatgaaacaaagatctaccacactgatcttgtcttgctggatgaaaaggttatagtctaattaacactcatttcttctttattaatacttacatacaaacatggtactaacaaggtgctttatatacacaatatgcagggcaatagcatccatgttcaaatctatccacctgccatgattaagcttaggactcttctacaggaagggaaggtttactactttgactccttctctgtcagatatgcaaacagaacatataggccagttacgaaccctttgatgatctcattcactaaatggacaaccttagaagaatgcattgatgcttttgatgattttcctgccataactttttcattgacaccttttcaagacgccccgtctcttgtggacagaaatgctttctatgttggtataacctctttatcccttttttgtcttcctacgtttacttcttatacattagtggtttattgtttacatatatcttctctttaaccagatattatgggtgtcataactgaaattggtgcaacagacactctacgcccaaaatcaagaaacacagaaactttgaaaagaacaatgcagatttgggatgcaaggtaagctacaatatagactgaaatttccctttgttataaacttcctttaccttatattatccacactaactattgaatcatttgtttggctctttgaaacctttctaatagcaatgtcaggcaagcatccgagcacaattttcactgatcaagacgcagccattgcagcagcaattgcttttgtactcccggatataagtcattgtctttgtttgtggcacatttatctaaatggttgtaaaaatcttggtcatgtaattcataagcatcctaacaagtttctaactgattttaagagatgtgtctatcaggacagatcagagtatcatttcaacaagatgtagcatgaattgttgagtgaatacaagtttgaggataacgtatg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0390300, RefSeq:Os01g0390300