Difference between revisions of "Os01g0552300"

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(Created page with "{{JaponicaGene| GeneName = Os01g0552300| Description = Similar to Protein phosphatase-2C| Version = NM_001049846.1 GI:115437501 GeneID:4325851| Length = 3774 bp| Definiti...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0552300|
 
GeneName = Os01g0552300|

Revision as of 18:52, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0552300

Description

Similar to Protein phosphatase-2C

Version

NM_001049846.1 GI:115437501 GeneID:4325851

Length

3774 bp

Definition

Oryza sativa Japonica Group Os01g0552300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:22395499..22399272

Sequence Coding Region

22395502..22395809,22395892..22396023,22396483..22396585,22396749..22396862,22397352..22397431
,22397541..22397594,22398115..22398231,22398355..22398409,22398503..22398535
,22398671..22398717,22398956..22399082

Expression

GEO Profiles:Os01g0552300

Genome Context

<gbrowseImage1> name=NC_008394:22395499..22399272 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:22395499..22399272 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctgctgagcccgcgtgtgccgcggctgccgctcgcctccgcctccgccgctggagcggggctccggtgctgcgtcagcggcggcagggccgggtcggcggcgtggtgccacgcgtcggcggccggcagcgtggcgtcgtcgtcgtcggagctggaggccatccggtgggggaccgccaagctgcagggcgcgcgcgacgagatggaggacgaggtcgtcctccgccccggctccctcctcgacggcttctccttcgccgccgtcttcgacggccacgccggattctccgccgtcgagttcctcagggacgagctgtacaaggaatgcgcggcggcgttggacggcggcgcggtgctgagcaccaagaacctcgacgccatcaccgactcgatccagcgcgccttcgccaccgtcgacgccaacctctccacctggctcgagcagatggacaaggaagatgagtccggcgccacggccacggccatgttcctcaggaacgatgtccttgttgtctcgcacattggcgactcctgcttgcaggtcgtatcacgcggtgggaggcctcaagctgtgaccaacttccaccgaccgtacgggaacaagaaagcgtctcttgaagaggtgaagcggatcagagcagcaggtggatggattgttgatggacgcatatgtggagaaatttctgtgtctcgtgcttttggagacattagatttaagacacggaagaatgagatgttggtaaaaggagttaaagaagggagatggactgaaaagtttatctcacgaataaattttaaaggagatttaatagtctcttcacctgacgtatccctggtcgaacttggaccagatgtggaatttgttttgctagcaacagatggtctttgggattacattaaaagctctgaagcagtagcattagttagggatcaactacggcaacatggggatgtccaggttgcctgtgaggcacttggtcagatagctctggatcgtcggtcgcaagacaacattagtatagtcatagctgacttggggaggacaaactggaaggagctgcctgctcaaaggccaaatttattcttggagttaactcaagcagttgcaacagttggggccgtctcattagggatttatatttcatcgctccttgcgttgcagtag</cdnaseq>

Protein Sequence

<aaseq>MALLSPRVPRLPLASASAAGAGLRCCVSGGRAGSAAWCHASAAG SVASSSSELEAIRWGTAKLQGARDEMEDEVVLRPGSLLDGFSFAAVFDGHAGFSAVEF LRDELYKECAAALDGGAVLSTKNLDAITDSIQRAFATVDANLSTWLEQMDKEDESGAT ATAMFLRNDVLVVSHIGDSCLQVVSRGGRPQAVTNFHRPYGNKKASLEEVKRIRAAGG WIVDGRICGEISVSRAFGDIRFKTRKNEMLVKGVKEGRWTEKFISRINFKGDLIVSSP DVSLVELGPDVEFVLLATDGLWDYIKSSEAVALVRDQLRQHGDVQVACEALGQIALDR RSQDNISIVIADLGRTNWKELPAQRPNLFLELTQAVATVGAVSLGIYISSLLALQ</aaseq>

Gene Sequence

<dnaseqindica>4..311#394..525#985..1087#1251..1364#1854..1933#2043..2096#2617..2733#2857..2911#3005..3037#3173..3219#3458..3584#atcatggcgctgctgagcccgcgtgtgccgcggctgccgctcgcctccgcctccgccgctggagcggggctccggtgctgcgtcagcggcggcagggccgggtcggcggcgtggtgccacgcgtcggcggccggcagcgtggcgtcgtcgtcgtcggagctggaggccatccggtgggggaccgccaagctgcagggcgcgcgcgacgagatggaggacgaggtcgtcctccgccccggctccctcctcgacggcttctccttcgccgccgtcttcgacggccacgccggattctccgccgtcgagttcctcaggcacccccctccctgattctcctcctgctcttcgtcatggccgctttccgcgctaacctctctccttggcgctgacatgcagggacgagctgtacaaggaatgcgcggcggcgttggacggcggcgcggtgctgagcaccaagaacctcgacgccatcaccgactcgatccagcgcgccttcgccaccgtcgacgccaacctctccacctggtcaggcccagttaggattccgctgaacaattccgattgccttctgcttagattagctactaaggccctgtttagaactccggcaaaatttttcaccctgttacattgaatatttggacacatgcatggactattaaatataaacgaaaaaataactaattacatagatggcgggtaaattgtgagacgaatcttttaagtctaattgctccatgatctgacaatatggtgctacagtaaacatttgataatgacggattaattaggcttaataaatttgtctcgcagtttacatatagattatgtaatttgttttgttattagtctacatttaatacttcaaatgtatgtccatatatccgatgtgacacgtcaaaactttacaccctggatctaaacacagcctaattcctcgcatgtttaacgctgtgtgacgtgacgcctgcttcttcttcacaggctcgagcagatggacaaggaagatgagtccggcgccacggccacggccatgttcctcaggaacgatgtccttgttgtctcgcacattggcgactcctgcttggtactaacaattccctacacataataacatgcgtatatattaatcaattatcaatttatcatatatcccgttgtcattggctagtgcatcgtgattgtgatgctgaagtgaattgtgagttttattctgctgatgatgagggtgggtcttgaatgttgattagcaggtcgtatcacgcggtgggaggcctcaagctgtgaccaacttccaccgaccgtacgggaacaagaaagcgtctcttgaagaggtgaagcggatcagagcagcaggtggatgggtgtgttttctcttccagagttccactctaatcttctaaactaccgttcttctagttttgtaaagatcatgttcacataatttagtatagagcgcttacgaaaacctgtcctcagctcagcaagtccttaacacccatgagaaaataacaatatgttgcctttccccataaagattgcagttcatttttcaaatatggccatatggaacaataatcaacaggattgacccggtgaaattctagcacattgtttgctcttctagtttgtaattcacattctaagttagtggttactagtcatactactgctgtgggcctgtggttgcatattgtccatttagacccattattatggttttacagagaataaatgggtttggtgctgtatggagtaatataatatgctgatggatattttgttcactgcttgaaatgccgatctcactcatgtgactcttctttgttacgatatcgatgtactttttgtagattgttgatggacgcatatgtggagaaatttctgtgtctcgtgcttttggagacattagatttaagacacggaagaatgagttcgtcccttatactctctgttctctgttcatacattaagcataccttttgttacattatttcgaaacaataccctgctaatttttaacttctcatggttttgtacaggatgttggtaaaaggagttaaagaagggagatggactgaaaagtttatctcacggttaagctctaatgcttttgttcttatgatttttttatgacttgttgtcaagtatttgtttttcttttgtattgatatgttccgttacatctgaattcagaaacataccaatgcagctattcttaattctgatcaaacagcgaggccatttgttcagttacatcttctcttttcattctcatggtgaaaataaaacacaatagcagggctaaatatcatctgaattcttagccacaacttaccctctactagtatgtaataacctgatttctttttcttatatgttgacaattatcaattgagttccttatcaactgttgccaagataatttgagagctaattactgaccatacattctcaattatatatctgcttactctcaagaacaaacattcttcagtattccaacttttacaccttttattggcgaatgctgctgctgcatgtcatgagatgtcttaactacacaatatgtctcttcttctgtgattatgtatgtaatcaatatctttcttgcagaataaattttaaaggagatttaatagtctcttcacctgacgtatccctggtcgaacttggaccagatgtggaatttgttttgctagcaacagatggtctttgggattacattaaaaggtatgtacacaaatctttttattgtgtagttgtcctgcttatattcgttcttgtctgcctcctgaagacatcttagttggctattcaacactttgacatgtataatttggctatcttatatagctctgaagcagtagcattagttagggatcaactacggcaacatggggatgtccaggtatgaagtttatttcctctcaaatcaagaactcattatgtttctttttgcaacttatttttaatattgcttatttttcatttgtttgtgtaggttgcctgtgaggcacttggtcagatagctctggtattgactcttgccaccttttactttgccacttatctattctcttatttataaagttaattatcaaatatgatttggtggaccctgcatatcgaaaatgctttcttaaatttcttgctttatttccaattgcaggatcgtcggtcgcaagacaacattagtatagtcatagctgacttggggtaatgattcttaacctttacattggatgtttgtttagaacgaattcaagcattttgtgcatgaacgatgttgtccttgttctagagttcttcccattccgatttcaaacgcattatgagatgatgcccatttcgcacaatttgctccttttccgtcactataatcaggctatagtggatctctttggtcttggtcagcatctcttaaccacattcactgtatcttatttcttggcaggaggacaaactggaaggagctgcctgctcaaaggccaaatttattcttggagttaactcaagcagttgcaacagttggggccgtctcattagggatttatatttcatcgctccttgcgttgcagtaggcctaggtagttctttcaagtgtgtatagtacttacagttttacggtctgcaacttctagctgcaaataatgtacattcttatagggtaaatgcataggatatccgttgaatatgtacttcagctcctgctggccaagatattaatggggctcttttttttttttctggaagatcctttgattcatctca</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0552300, RefSeq:Os01g0552300