Difference between revisions of "Os01g0618400"

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(Created page with "{{JaponicaGene| GeneName = Os01g0618400| Description = Similar to RNA helicase (Fragment)| Version = NM_001050125.1 GI:115438620 GeneID:4326614| Length = 3629 bp| Definit...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0618400|
 
GeneName = Os01g0618400|

Revision as of 18:54, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0618400

Description

Similar to RNA helicase (Fragment)

Version

NM_001050125.1 GI:115438620 GeneID:4326614

Length

3629 bp

Definition

Oryza sativa Japonica Group Os01g0618400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:26255027..26258655

Sequence Coding Region

26255093..26255472,26255942..26256048,26256152..26256207,26256297..26256521,26256606..26256812
,26256892..26256978,26257066..26257161,26257235..26257450,26257643..26257825
,26257957..26258184

Expression

GEO Profiles:Os01g0618400

Genome Context

<gbrowseImage1> name=NC_008394:26255027..26258655 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:26255027..26258655 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccggcgacctcctcctccgcacccagagcggcctccccgtgctcgcaagggccttccccagctgcctctgcctccgcgtccctgcccgccgccgccggggcgctcctcccctgaccgccgccaaggtcgacgtcgccgacgccgtcggccgccgtgtcaggtcgggcggcgcggccgtaccgaagcggcgtcgtagccgtagggacgcggaggaggaggaggaggagggcctcgcgttctcgagggtggtcacgggcaggggaagaggcgtccgcgaggagggcgtggcggaaggggaggctccggaattcgatgcggcgaagagcggtgacgagtcgggaggcgtggatggctcgtacctcagcgacacaaggtttgatcaatgcactatttctccgttgtcactgaaagccgtcaaagatgctgggtatgaaaggatgacccaggtgcaggaggcaactctgccagtaatccttcaaggtaaagatgttcttgcaaaagcaaagacaggaactgggaaaactgttgcctttttgcttccagccattgaagttctctccgcattacctaattctcggagggatcaactacgtccatctataaatttgctggtgatgtgccctactagggagcttgcaatccaagtggctgttgaggccaagaaacttctcaagtatcaccgctcgctgggggtgcaagttgtaatcggtggcacacgattaacccaagagcaacgaagcatgcaagctaacccatgccagattcttgttgctacacctggaaggcttaaagaccatgttgagaacacacctggtttttctacccgactaaaaggtgtgaaggttcttgttcttgatgaagctgatcgcctgctggatatgggattcagaagagacattgagagaataattgcttccgttcctaaagagcgacagacattgctattttctgctactgtgccagaggaggtccgccaaatttctcatattgcaatgaagaagaattataagttcattaacactgttaaggatggtgatgaggagacacatgcacaggtgagtcagatgttcatgatcgcgccactagatctgcacttctctatcttatatgatgtattgaagaagcatgttgcagaggatgcagactacaaagtgattatattctgcactactgcgatggttaccaaacttgtcgctgaaattctttcccaactgagactgaatataagagagattcattccagaaagtcacaatctgccagaactaaggtctcagatgaattcaggaagtcaaggggtctgatattggttagttctgatgtatctgcccgcggcgtggattatcctgatgtcacccttgtcatacaggttggggtgccagctgatagacagcaatatatacatagacttggtagaactggacggaagggaaaggaagggcaaggcctattactgttggctccatgggagaagtactttcttagtagcattaaggatttgtcaatatcagaggctacggtaccttctgttgattcaagcactcagacaatagtcaaagacgcagtccggaaagttgagatgaggagcaaggagtgtgcctatcaagcatggttaggatactacaactctaacaagaccattggccgagaaaaatccagacttgttaagctcgcagaagagttcagccaaagcatggagctttcagttccgccagctatacccaagcaaattcttcgaaagatgggacttaacaatgttcctgggctgagatctacataa</cdnaseq>

Protein Sequence

<aaseq>MAAGDLLLRTQSGLPVLARAFPSCLCLRVPARRRRGAPPLTAAK VDVADAVGRRVRSGGAAVPKRRRSRRDAEEEEEEGLAFSRVVTGRGRGVREEGVAEGE APEFDAAKSGDESGGVDGSYLSDTRFDQCTISPLSLKAVKDAGYERMTQVQEATLPVI LQGKDVLAKAKTGTGKTVAFLLPAIEVLSALPNSRRDQLRPSINLLVMCPTRELAIQV AVEAKKLLKYHRSLGVQVVIGGTRLTQEQRSMQANPCQILVATPGRLKDHVENTPGFS TRLKGVKVLVLDEADRLLDMGFRRDIERIIASVPKERQTLLFSATVPEEVRQISHIAM KKNYKFINTVKDGDEETHAQVSQMFMIAPLDLHFSILYDVLKKHVAEDADYKVIIFCT TAMVTKLVAEILSQLRLNIREIHSRKSQSARTKVSDEFRKSRGLILVSSDVSARGVDY PDVTLVIQVGVPADRQQYIHRLGRTGRKGKEGQGLLLLAPWEKYFLSSIKDLSISEAT VPSVDSSTQTIVKDAVRKVEMRSKECAYQAWLGYYNSNKTIGREKSRLVKLAEEFSQS MELSVPPAIPKQILRKMGLNNVPGLRST</aaseq>

Gene Sequence

<dnaseqindica>67..446#916..1022#1126..1181#1271..1495#1580..1786#1866..1952#2040..2135#2209..2424#2617..2799#2931..3158#gtcgccgcgcgccaacccgccacaaaaccctacgcctccgctcatccctatccccactcgccggagatggccgccggcgacctcctcctccgcacccagagcggcctccccgtgctcgcaagggccttccccagctgcctctgcctccgcgtccctgcccgccgccgccggggcgctcctcccctgaccgccgccaaggtcgacgtcgccgacgccgtcggccgccgtgtcaggtcgggcggcgcggccgtaccgaagcggcgtcgtagccgtagggacgcggaggaggaggaggaggagggcctcgcgttctcgagggtggtcacgggcaggggaagaggcgtccgcgaggagggcgtggcggaaggggaggctccggaattcgatgcggcgaagagcggtgacgagtcgggaggcgtggatggctcgtacctcagcgacacaaggtaatcgcttgccttgcgccgcaaattgagagttatctcttcccctgtagaaatggttatggtttggaactgtagaaatggcgagtgctttatttatgtaagagtattttcgaatatgtggaaatggttatgtttccaaaacagaaatggcgagtgcttgtttccagtattttccagatgagtagagcttaaagattttaaacgttgtgttagggagacgccaaacatgtctgttctactagaattaatcagttttcactaagttctagcagcgtgctgtgtttgtataattatttattgctgtaaaccaactgttactgcctccttcaagtagcataatgctcatctgtaaacaatcattttgctaatcctcgactaactagaatatgagaagactgctcatccgatttgtataacaggatttacaaatgtactgctttcgtaatttagaaatgctattcatatgcaggtttgatcaatgcactatttctccgttgtcactgaaagccgtcaaagatgctgggtatgaaaggatgacccaggtgcaggaggcaactctgccagtaatccttcaaggtcagggaaatggcaatgttattgttcctagtccagtgaatgataccagtattttttggtgggagtcctgaaactgaatctgcaacattttgttccattttaggtaaagatgttcttgcaaaagcaaagacaggaactgggaaaactgttgcctttttggtacttatcctaaatcccaatcaaattatggcattagtcgctatcacctattaacgtattgactaatgagttagagtatcttgttttagcttccagccattgaagttctctccgcattacctaattctcggagggatcaactacgtccatctataaatttgctggtgatgtgccctactagggagcttgcaatccaagtggctgttgaggccaagaaacttctcaagtatcaccgctcgctgggggtgcaagttgtaatcggtggcacacgattaacccaagagcaacgaagcatgcaagctaacccatgccaggttgtacccatgaactacagacaggtcatatcttggattcttagtgcaagttatgtatactaacactgtgcactgatcaaacagattcttgttgctacacctggaaggcttaaagaccatgttgagaacacacctggtttttctacccgactaaaaggtgtgaaggttcttgttcttgatgaagctgatcgcctgctggatatgggattcagaagagacattgagagaataattgcttccgttcctaaagagcgacagacattgctattttctgctactgtgccagaggaggtaaactctttgtattattaagctctctttatataaagttaaacctctaacaaactatcttttgaacgtttatatttaggtccgccaaatttctcatattgcaatgaagaagaattataagttcattaacactgttaaggatggtgatgaggagacacatgcacaggtttagacctgtcattttttcttgagcttttatgctaaatgctaaagttttggagctcattagaacattgcgctgcttctatatcaggtgagtcagatgttcatgatcgcgccactagatctgcacttctctatcttatatgatgtattgaagaagcatgttgcagaggatgcagactacaaagtaagtttcatatccaaactgtgaacctatatcttgtggattatggatgtgtcattgttgttcaattttacaggtgattatattctgcactactgcgatggttaccaaacttgtcgctgaaattctttcccaactgagactgaatataagagagattcattccagaaagtcacaatctgccagaactaaggtctcagatgaattcaggaagtcaaggggtctgatattggttagttctgatgtatctgcccgcggcgtggattatcctgatgtcacccttgtcatacaggtacctgttattatttcccctcacaaaattcttcttgtaaactgatattgctatattgttgttatttatttttcttttctttatgaatgtttggaaaactatttctgttgaccaaaatatggcaatgcaaatatgcttgcagtttgttgtgttctgataaagttttttctccttgaatatttgctcttgcaggttggggtgccagctgatagacagcaatatatacatagacttggtagaactggacggaagggaaaggaagggcaaggcctattactgttggctccatgggagaagtactttcttagtagcattaaggatttgtcaatatcagaggctacggtaccttctgttgattcaagcactcagacaatagtaagttcataatcctctcatctatttcgccatgcaacataggtcagatctagcgcaaattttgcaataggaagtccatttttgcctgctcaagaaatctcaagtactcttgtttctgctttatttgataggtcaaagacgcagtccggaaagttgagatgaggagcaaggagtgtgcctatcaagcatggttaggatactacaactctaacaagaccattggccgagaaaaatccagacttgttaagctcgcagaagagttcagccaaagcatggagctttcagttccgccagctatacccaagcaaattcttcgaaagatgggacttaacaatgttcctgggctgagatctacataaccctgatgcctgaaattaaggtccttgtgcactttgtgctaaaagcgtagagcacactatcgacatttgatccatcactgtgctctctgctgcgtttatggtaaacttcaggcgtgatgtacctcactgctgcagatatttgagctttgcagctcggtgggttgatattggtcagaagtttggacgatcaacactatgtatgatcacagatcacttctctcggaggttcaggagttctaagttcaactattcaagcatgactaggagtctttctggtcctctacaaatacaggttcaaaaacagacagtgattctacagaagctcatatagtgcaacacacgaagatttttatttttaccttgttctgatccattttgagatggatttacttgagacactagatgatcagatcgtttattaaacccatgcttatatattatttatcagatagtagcatttttttgctacca</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0618400, RefSeq:Os01g0618400