Difference between revisions of "Os01g0640600"

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(Created page with "{{JaponicaGene| GeneName = Os01g0640600| Description = Similar to LIMONENE cyclase like protein| Version = NM_001050214.1 GI:115438798 GeneID:4326586| Length = 3159 bp| D...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0640600|
 
GeneName = Os01g0640600|

Revision as of 18:55, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0640600

Description

Similar to LIMONENE cyclase like protein

Version

NM_001050214.1 GI:115438798 GeneID:4326586

Length

3159 bp

Definition

Oryza sativa Japonica Group Os01g0640600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:27500613..27503771

Sequence Coding Region

27500643..27500975,27501083..27501213,27502523..27502868,27502954..27503649

Expression

GEO Profiles:Os01g0640600

Genome Context

<gbrowseImage1> name=NC_008394:27500613..27503771 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:27500613..27503771 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgccacagcgcctcgccaccgccaccgcgcaccaccccgccggcccgtcccgccgccggctccaccaccgccgcggcgcgatgttctccgtctcctgctggcgcatcggggccatcgcctccctcgtcgcggcggccgcggccaccaccgtgctcctcaacttctccctcccatcctcaccccacgtgcccgccacagacttcaccgggaaactgtccgccgcgatctccccgccgccaccgccctcgtcgcctcctccagcaccggcgacgccgcctcctcctcctcccgcgccaccgccacctgctgcaaggccgcgacgaagagagccgtcgtattggaggatggcgccggaggaggcactgcggtacgccaagaaggagataatggccgccgggccggtgatcgacgaccccgacctatacgcgcctctcttcaagaacgtctcccagttcaagaggagctatgaactgatggaacggatactcaaagtttacatttaccaggacggccggaggcccatcttccacacgcctcccctcagcggcatctacgcgtccgagggctggttcatgaagctcctcaaggagagccggaggttcgccgtcaccgaccccgccaaggcgcacctcttctaccttccctacagctcccagcagctcaggatctcgctctacgttcccgactcccacaacctcaggccgctggccgcctacctccgcgacttcgtcaaaggcctcgccgccaagtacccgttctggaatcgcaccagaggcgccgaccatttcctcgtcgcctgccatgattggctgcagggatcttacacgacgacggcgcatggcgacctgcgccggaacaccgtcaaggcgctgtgcaacgcggacagctcggaggggatcttcaccccgggcagggacgtgtcactcccggagacgacgatccggacgccgaggcggccgctccggtacgtcggcgggctgccggtgtcgcggcggggcatcctcgccttcttcgccggcaacgtgcacggcagggtgaggccggtgctcctcaagcactggggcgacggccgcgacgacgacatgcgggtgtacgggccgctcccggcgcgggtgtcccggcggatgagctacatccagcacatgaagaacagccgcttctgcctctgccccatggggtacgaggtgaacagcccccggatcgtggaggcgctctactacgagtgcgttccggtgatcatcgccgacaacttcgtgctgccgctgagcgacgtgctggactggagcgccttcgcggtggtcgtcgccgagaaggacgtaccggacctgaagaagatactgcaggggatcacgctccggaagtacgtggccatgcacggctgcgtcaagcggctgcagaggcatttcctgtggcacgcgaggcccctccggtacgacctcttccacatgatcctgcactccatctggctgagcagagtgaaccaaatcgagctccacgagtag</cdnaseq>

Protein Sequence

<aaseq>MPPQRLATATAHHPAGPSRRRLHHRRGAMFSVSCWRIGAIASLV AAAAATTVLLNFSLPSSPHVPATDFTGKLSAAISPPPPPSSPPPAPATPPPPPPAPPP PAARPRRREPSYWRMAPEEALRYAKKEIMAAGPVIDDPDLYAPLFKNVSQFKRSYELM ERILKVYIYQDGRRPIFHTPPLSGIYASEGWFMKLLKESRRFAVTDPAKAHLFYLPYS SQQLRISLYVPDSHNLRPLAAYLRDFVKGLAAKYPFWNRTRGADHFLVACHDWLQGSY TTTAHGDLRRNTVKALCNADSSEGIFTPGRDVSLPETTIRTPRRPLRYVGGLPVSRRG ILAFFAGNVHGRVRPVLLKHWGDGRDDDMRVYGPLPARVSRRMSYIQHMKNSRFCLCP MGYEVNSPRIVEALYYECVPVIIADNFVLPLSDVLDWSAFAVVVAEKDVPDLKKILQG ITLRKYVAMHGCVKRLQRHFLWHARPLRYDLFHMILHSIWLSRVNQIELHE</aaseq>

Gene Sequence

<dnaseqindica>31..363#471..601#1911..2256#2342..3037#attcatgcctcccgcttcctcctccacccaatgccgccacagcgcctcgccaccgccaccgcgcaccaccccgccggcccgtcccgccgccggctccaccaccgccgcggcgcgatgttctccgtctcctgctggcgcatcggggccatcgcctccctcgtcgcggcggccgcggccaccaccgtgctcctcaacttctccctcccatcctcaccccacgtgcccgccacagacttcaccgggaaactgtccgccgcgatctccccgccgccaccgccctcgtcgcctcctccagcaccggcgacgccgcctcctcctcctcccgcgccaccgccacctgctgcaaggccgcgacgaagagaggtacgcgatcgatcgagcagaggccgatccaaatctaattattatttattcgtgttagcatagtgatcgatcgagtttgttaattcctgcgtcgaactggtgatcagccgtcgtattggaggatggcgccggaggaggcactgcggtacgccaagaaggagataatggccgccgggccggtgatcgacgaccccgacctatacgcgcctctcttcaagaacgtctcccagttcaagaggtataatattattggtgcatgcgtcgcttcttcttccgttcctcgtttcacgcaccagctaccaaattaaagttcgtctcattctagcatgttttgataaacaggatgatcgagttgccggttttttttctatttctctggatttccggacatgtagaagcgtgtatttttttttactagatttcgatcgttttttactatgttgatggctatacatcttatatatgtgtgtaacaactaacattctatcccttatgctctttcaaggaggtaataatttttttatatcttaaattctcttatatagtgtgtattggaaaacatatagattaataattaaaacttacagtgtaattatattgtaagtttttaaatttatagtgtaattaaaatgaaaatatagatatattacagtataatactgatttgactacattttagtgaaaattaatgtatcataaatatatctagtgtcttatatttttaaacgaaattgtgatgtcagatcagacaagtcaatgggccgtggtttgtacccaagaggctcactatttcggaacgggaaactttcaggggaacaaatatttagaaatttccattgaactttagaaattttgatcatttttttagtaatgaaattcattccagccttttcttcaaagaaactatagataatttttacataaggttgtgggacgaatgactactattgctaaacctcaagctatggttagcgagaatttacataaccattgtaatttgaatgaaacattttgaaatttaaatatttttcatgaaattcgaataaatttggggggttatttttgcgtcgtaggaaaacattacccaccccaaaatcacaattcgaaattgtttttgaacaaaaagaaaatccggaattgtgaacatctccatacatgattgttagtgtctcccgatttgcgttccttgctgcgtatattacttcctctatcctaaaatatacaaagttgttaattttttacataacatttgatcatttatcttatttaaaaaatttatataactattatttattttgttgtgactctttttatcatcggagaaattataatcttaacttatatttttacatattttttttataaatttttaaataagacgaatgatcaaacgttaattgaaaaagtcaacggcatcgtacattatgttgaccactgataattatcaaaccataatatttctgcattttgtacagatttttgtaccactgataattcagtatggtgactaagcttgtcataattgtagcgaaaatgtgatcatccaggagctatgaactgatggaacggatactcaaagtttacatttaccaggacggccggaggcccatcttccacacgcctcccctcagcggcatctacgcgtccgagggctggttcatgaagctcctcaaggagagccggaggttcgccgtcaccgaccccgccaaggcgcacctcttctaccttccctacagctcccagcagctcaggatctcgctctacgttcccgactcccacaacctcaggccgctggccgcctacctccgcgacttcgtcaaaggcctcgccgccaagtacccgttctggaatcgcaccagaggcgccgaccatttcctcgtcgcctgccatgattgggtaaaccaacatcttgatgttttttttttcactctctttttgtgttgcagttttgatcgtgtttggttttggttcctggcaatggctgcagggatcttacacgacgacggcgcatggcgacctgcgccggaacaccgtcaaggcgctgtgcaacgcggacagctcggaggggatcttcaccccgggcagggacgtgtcactcccggagacgacgatccggacgccgaggcggccgctccggtacgtcggcgggctgccggtgtcgcggcggggcatcctcgccttcttcgccggcaacgtgcacggcagggtgaggccggtgctcctcaagcactggggcgacggccgcgacgacgacatgcgggtgtacgggccgctcccggcgcgggtgtcccggcggatgagctacatccagcacatgaagaacagccgcttctgcctctgccccatggggtacgaggtgaacagcccccggatcgtggaggcgctctactacgagtgcgttccggtgatcatcgccgacaacttcgtgctgccgctgagcgacgtgctggactggagcgccttcgcggtggtcgtcgccgagaaggacgtaccggacctgaagaagatactgcaggggatcacgctccggaagtacgtggccatgcacggctgcgtcaagcggctgcagaggcatttcctgtggcacgcgaggcccctccggtacgacctcttccacatgatcctgcactccatctggctgagcagagtgaaccaaatcgagctccacgagtagagaccgcgtcttgtgttcggtcagagaaatgtacgttcttggttcagcgcaagattctctgtaagttttggagaagactggccagaatcttaaacgatatgcaattatgaattatgcatgca</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0640600, RefSeq:Os01g0640600