Difference between revisions of "Os01g0658900"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os01g0658900| Description = OSBZ8| Version = NM_001050301.1 GI:115438972 GeneID:4327165| Length = 5376 bp| Definition = Oryza sativa Japonica G...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0658900|
 
GeneName = Os01g0658900|

Revision as of 18:55, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0658900

Description

OSBZ8

Version

NM_001050301.1 GI:115438972 GeneID:4327165

Length

5376 bp

Definition

Oryza sativa Japonica Group Os01g0658900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:28555939..28561314

Sequence Coding Region

28556280..28556495,28556597..28556722,28556846..28556923,28557445..28557602,28557818..28557866
,28557957..28558002,28558115..28558242,28558742..28558825,28558905..28558997
,28559093..28559137,28559380..28559439

Expression

GEO Profiles:Os01g0658900

Genome Context

<gbrowseImage1> name=NC_008394:28555939..28561314 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:28555939..28561314 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaaatgacgaagctgtagttactcagaagatggggaaagcaccatcgccccctaaggatcatccagcccttagtccataccttgattggtcaaatatgcaggcatattacggcccagggatcttgccaccaacattttttagccctggaatagccgctggtcatacccctcctccatttatcttgggtcctcagcctctggtgccatccgcttttgggaagccatatgccgcaatttatcctcctggtggagctttttcacatccgttcatgcccctaatggtgagcccattgagcatggagccagcaaagtctgtcaacagcaaggatagctgttcaaataagaaaatgaaggaaattgatggtgcggctgtgtcaactggcagtggcaacagtgaaaaaacaagtggagattgcagcttagaaggatccagtgatggaaacaaccagaaggcaagtggaactcccaagaaaaggagcatagatgataggcctaaatcaggcgtggaaactggtggagctttaacacctaatgatagacctagcgaacaagcagctttgccaaatctatgcattccggttacagcaatcaaaccagacgtgagcactgctagtgacttcagagttattgccaccccagtaactgaagtgccaactaaggatgataaggaatcgaagcgcgagagaaggaagcaatcaaacagggagtctgctcggaggtcaaggttgaggaagcaggccgagactgaggaactggctagaaaagttgagctattgactgcggagaacacatcccttagacgtgaaataagcaggctaacggaaagctccaagaaacttagattagagaattctgctctaatggagaaactaacggaaaccgggcctgatgaagcacaagaagtgcctccagtcaaaacaaaagcacagcaagctcgaggcgtcgaaaatttcctgtcaatgatagacaagactggcacgccgagaagcagcgggcacatggatcatgccattgccacgcccaagcttcgtcaactcctgggctctggtctggcgactgatgctgtagccgcaaggtaa</cdnaseq>

Protein Sequence

<aaseq>MGNDEAVVTQKMGKAPSPPKDHPALSPYLDWSNMQAYYGPGILP PTFFSPGIAAGHTPPPFILGPQPLVPSAFGKPYAAIYPPGGAFSHPFMPLMVSPLSME PAKSVNSKDSCSNKKMKEIDGAAVSTGSGNSEKTSGDCSLEGSSDGNNQKASGTPKKR SIDDRPKSGVETGGALTPNDRPSEQAALPNLCIPVTAIKPDVSTASDFRVIATPVTEV PTKDDKESKRERRKQSNRESARRSRLRKQAETEELARKVELLTAENTSLRREISRLTE SSKKLRLENSALMEKLTETGPDEAQEVPPVKTKAQQARGVENFLSMIDKTGTPRSSGH MDHAIATPKLRQLLGSGLATDAVAAR</aaseq>

Gene Sequence

<dnaseqindica>4820..5035#4593..4718#4392..4469#3713..3870#3449..3497#3313..3358#3073..3200#2490..2573#2318..2410#2178..2222#1876..1935#agcgcgcctcagcctcagtacccaccacctccacgctcgcgccgtcggcttcgtgctcctgcgccgccgcaccgatctgcaccgtacgcgggcgtcgatccatccaaggtacgcgcggcgcggccgatctctgcctccctctccgtgttcacgcgcaatgcccggcccctggttcgtcttctctttcgttttagcacttcgccgcgagggtgaaggtttgtagtagcggagagcaggagccaggaagcccaagccctccctcgttcgtccctgaaattttaacgcgtttcgtccggactccggaagatcctctgttcgatcttgtagcgagtatattatcatacttctactgtcgtcgtagtagcaattcacctccaaaaaaaaaaacaaaactgtcgtagtagcagtgattcaaatgcattggttcggctttcttttgcttcctgttgggtttaaaagcgaatcctatggccacacgtaggaagcgtgtacacgtttcttaagtttactactagtatatttttcgttatttcaaacagaaatgaaattatttatgggaaaaggtgagagttgagtaattggaacgccgattttcccggtttcactatttgttaggtaacaagtggactgttacgtgtaaaattattgcgctccataggacccctggtttgtgcggtttggaagactgtaaaattggtgcccgccctggctgcccttgtcatctcagtctcaggtagtcaggtgtcacttggccttgtgcatacgttggataccggagctttcacctagtctagtcagcttttggttggaattgctttcaactggttaatcctgtccggtttgtggagtgctttggggggggggggggggggggatggtggctgtcgtaatcttagattaatttaattttcttggagatagtgtgctgtactcttgttatcagtattgaaagcacgactagatttttatgtgaggatggtgaagcacttctggaccatgtcaaatgactgaacatagctacggccagtttatttctgtactatatatttttgaaaattgctagagggcttgaatttccatccctccaatttgttgcagggattggtactccggttctttctccggcacactaatctctcacaacaatgtatattagtgtgggttggtgtggagaggtggcgccctacgctggtggtaggcgggggttggcaagggggtgtatacggtggtgttggtgttgggagtgggttgtggggggagggggagtagggattcagattgggtgacatagggtgaatctcgaccctccaaaacaaatccaacagcttagattcgtccacgtcatcatgagtaaaaattttattcccagtaaaacttttactccaggaattttactcctagtaaaatttttactcctgagtaaatctgcgagtaaaatttttactcgtgatgacgtggacgaatctcagccgttggatttgttttggagggccaagattcaccctatgtcaccttgtgacatgtctaccctatgtcacccaatcccgctagaggcgaagaaggaggatggcgtaggagagactagagatgagtaagacgatgaagcagtgacgccgtgatggctcactggaaaggaggaattttaagtgtcggattgctgtacaggaatgcctgcacaagctaggtgtgtctagtggtttttgtacatgattgtgcgatatctatgggcctgcaagagtttcatatctgtgcatttagtgaattatattttttactgaaacatacttttttgtgtgactattttcagtacttatgatatggtttagcatatgaccaatctgtacgatgaaaatatgcaggaactcataaaaagtcatgggaaatgacgaagctgtagttactcagaagatggggaaagcaccatcgccccctaaggtaaacgcatataagtagataaccaaggccaaatatgggcacagacaacattgcacgagcaagatgtcaaattgattattggcatttcttcttttatttgacaacataaatccgctttgaggttttagatgtgctagggctgcatcaaacagctgcgaagcatgattttgtcaattagccacattattgacaaggggtggaatccttaaaggtgcctaagtagcaactgtattactttgcaggatcatccagcccttagtccataccttgattggtcaaatatgcaggttaggtgtctgacaatctatattttcctgataactgaagtttggattttcctttgaactgagtaactaaatttaaggtatcataatcaacacaggcatattacggcccagggatcttgccaccaacattttttagccctggaatagccgctggtcatacccctcctccatttatcttgggtcctcaggtttttgactttactctccatgtatcaggtgtcattcttatctttaagagttctaagttatttccctgtgcctctacagcctctggtgccatccgcttttgggaagccatatgccgcaatttatcctcctggtggagctttttcacatccgttcatgcccctagtaagcatttcattttgttcacctatctatttttcagaacattgcatttaactaaacatggaaggcaccatggatttgagtcaactatcacgctttggaattaaagcgatatccaatttgttaaaatgcttgcataaagccatgttaacatggaaacttctctatgagcagaactaacacgaatgatttctgccgttcgaagtattcatgatatgtagttggaacttggaaaacctatccttgcagacgaattatctctacatgaaaataaattcattcatatattgccattttttctgtagaaggaagctggattttttatttttttttcttctgtggaagtatatatgtatttttaaatcatttgttcaattgttcttttctttaatgtctttcttgcttcacttgtgtgaacgttctgtgctgaattgctaatcgttttgctagtatcttaattatgcttctgttattgattgtttatcttatattttttatcaagatggtgagcccattgagcatggagccagcaaagtctgtcaacagcaaggatagctgttcaaataagaaaatgaaggaaattgatggtgcggctgtgtcaactggcagtggcaacagtgaaaaaacaaggtgatacaggattttacaaaatgaaaacgataaccagattgatagttcaacttatatacaactattatgagtgacaaactgatttcatgtgcatctgatgctgccaatgcagtggagattgcagcttagaaggatccagtgatggaaacaaccagaaggtattgttctgtagttatttaatgccattgaagatgttctgagccagcaagcttatacttaacatgctgatatatttcatcattattcaggcaagtggaactcccaagaaaaggagcatagatgataggcctaaatcaggtactcaatcttggtatcatctggtacttgatttttataatatccagttcaatgactcatcgtgaattttgcggcatttcttgttatttctctaattgataactgaaacataatataatcctctgtttaagttttcagatgataagaaggccatatattctgagcactaagcaacactaagaggtgatttggtttttgtttttccttttctccaggcgtggaaactggtggagctttaacacctaatgatagacctagcgaacaagcagctttgccaaatctatgcattccggttacagcaatcaaaccagacgtgagcactgctagtgacttcagagttattgccaccccagtaactgaagtgccaactaaggtatgccagttgcagttttttttcttgttaaagtgccagcaaattatcatttagaaaaggcgccactaacttcgtggagtgaaccatgatccatacttggacgaagcaatcaaatttcttaatgtttccactaccacgacttcagtagaacatccttttttttttgagaatacaacatcccttatttattactgctgttattttttgggattaattctcgagtcgctagtatggttttgctaaatagattgctggagctctttgcattctttttcttttaaaaaagaactacacattcattccagagagaaacagaacaagacccgtcccagaaggacaccctgagatagcaacaaaacacctcaccaaacaccactgtcaggacacctaaatgcaaagtacctagatactcaataaaaaatgagattcactcttgagatcaggaattttcagctttcgattcatgggatcgtttcttcttgaattaaactatagacctataatccttaataaattgtcaggatgataaggaatcgaagcgcgagagaaggaagcaatcaaacagggagtctgctcggaggtcaaggttgaggaagcaggtataataagatgcttagctagttttaacttgtaatgttttgtggtatccccttcagtattccatactctagtagaaatttaaaccatacttgtacaataatgatattctttcattctaacaggccgagactgaggaactggctagaaaagttgagctattgactgcggagaacacatcccttagacgtgaaataagcaggctaacggaaagctccaagaaacttagattagagaattctgctctaatggtaaacatcttttctaacaatatgatcattggagtattggagctattttcattgagcactagtccttttttttcttctctcaaatgcgccttgtttaacaggagaaactaacggaaaccgggcctgatgaagcacaagaagtgcctccagtcaaaacaaaagcacagcaagctcgaggcgtcgaaaatttcctgtcaatgatagacaagactggcacgccgagaagcagcgggcacatggatcatgccattgccacgcccaagcttcgtcaactcctgggctctggtctggcgactgatgctgtagccgcaaggtaatcttaacgacttgaccctcccgccgttcgtgctcaaacgcagcatgtggcctggtgaattttataagctcaacctgcccgcacgattaacatcgaagtattaggtacgattttgtcactgtattcgcccttgtaaattactagtagctgccttttagacgagcattccaaccgctccaccgggatatgaatgcccccctggccgtcagttcttccctgagtttttactctactctcgtagatctgtaacatcagtgctggctcgcgttgttcatatcaaactgatctctgtaaatactgtaacactgacagaaagccttctaactttgatcttttaccttt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0658900, RefSeq:Os01g0658900