Difference between revisions of "Os01g0663300"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os01g0663300| Description = Similar to (1-4)-beta-mannan endohydrolase-like protein| Version = NM_001050320.1 GI:115439010 GeneID:4327860| Lengt...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0663300|
 
GeneName = Os01g0663300|

Revision as of 18:55, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0663300

Description

Similar to (1-4)-beta-mannan endohydrolase-like protein

Version

NM_001050320.1 GI:115439010 GeneID:4327860

Length

3843 bp

Definition

Oryza sativa Japonica Group Os01g0663300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:28837665..28841507

Sequence Coding Region

28837767..28838117,28838437..28838631,28840293..28840624,28840745..28840810,28840898..28841165

Expression

GEO Profiles:Os01g0663300

Genome Context

<gbrowseImage1> name=NC_008394:28837665..28841507 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:28837665..28841507 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggcttctcggagctcatcgtgctgctctgctggtgctcgcgtgcgtcgtcgtcgtcgtcatccatggcctaggagaggcggaggccttgggaggagggggcggcttcgtgagggcgcaggggacacggttcgtgctcgacggcaacccgtactacgccaacgggttcaacgcctactggctcatgttgctggccgccgacccgtcgcagaggggcaaggtcagcgccgcgctcggcgaggccgccgggcacggcctcaccgtcgccaggacgtgggcgttcagcgacggcggcggcggcaacgcgctgcagttgtcccccggcaactacaacgagaacaccttcaagggtttggattttgtgctgtctgaggctaggaagtatgggatcaaggtgatactgagccttgtggacaactacgactcttttggcgggaggaagcagtatgtgaactgggcaagagcgcaggggcagggcattgggtccgacgatgagttcttcaccaaccctgttgttaagggcttctacaagaaccacgtgaagacggtgttgacgaggaagaacacgatcacgggggtggcgtacagggacgacccgaccatcctggcgtgggagctgatgaacgagccgaggtgccagtccgacctgtccggccgcaccgtccagtcgtggatcaccgagatggcggcgcacgtcaagtccatcgaccgcaaccacatgctggaggtcggcctcgagggcttctacggcgcctcctcgccgtcccgcatcgccgccgtcaacccctccggctaccagctcggcaccgacttcatcgccaacaaccaggtccccggcatcgacttcgccaccgtccactcctaccccgaccaatggttgtcgggcaaggacgaccaggcgcagctggggttcatggggaggtggctggacgcgcacatcgcggacgcgctctacggcacggtgtacgccaagatctacgagtcggcgcggaggggcggcgccacggtggggggcctcttctggcagctcctggtgcccggcatggactcgtaccgcgacggctacgaggtcgtcttcggtgagacgccgtccaccacgggcgtcatcaccacgaacagccggcggctgcgcttcctcagcaaggcgttcgcgcgggccaggcaggcccagccggcgagggggaagggccgacacaacggcgggaaatag</cdnaseq>

Protein Sequence

<aaseq>MRLLGAHRAALLVLACVVVVVIHGLGEAEALGGGGGFVRAQGTR FVLDGNPYYANGFNAYWLMLLAADPSQRGKVSAALGEAAGHGLTVARTWAFSDGGGGN ALQLSPGNYNENTFKGLDFVLSEARKYGIKVILSLVDNYDSFGGRKQYVNWARAQGQG IGSDDEFFTNPVVKGFYKNHVKTVLTRKNTITGVAYRDDPTILAWELMNEPRCQSDLS GRTVQSWITEMAAHVKSIDRNHMLEVGLEGFYGASSPSRIAAVNPSGYQLGTDFIANN QVPGIDFATVHSYPDQWLSGKDDQAQLGFMGRWLDAHIADALYGTVYAKIYESARRGG ATVGGLFWQLLVPGMDSYRDGYEVVFGETPSTTGVITTNSRRLRFLSKAFARARQAQP ARGKGRHNGGK</aaseq>

Gene Sequence

<dnaseqindica>103..453#773..967#2629..2960#3081..3146#3234..3501#gcttcacctcatcgccattgccatccaaagcaaagaagagagccaccctgcagacacagtacgcacacgcagagagagagagagagagagagagagcaagggatgaggcttctcggagctcatcgtgctgctctgctggtgctcgcgtgcgtcgtcgtcgtcgtcatccatggcctaggagaggcggaggccttgggaggagggggcggcttcgtgagggcgcaggggacacggttcgtgctcgacggcaacccgtactacgccaacgggttcaacgcctactggctcatgttgctggccgccgacccgtcgcagaggggcaaggtcagcgccgcgctcggcgaggccgccgggcacggcctcaccgtcgccaggacgtgggcgttcagcgacggcggcggcggcaacgcgctgcagttgtcccccggcaactacaacgagaacaccttcaaggtcggtcccttagccacattgtccctctcaagtgggtagtcccgctactcgtgtaaaaaccgcttgctagtttatttttcgcatgttagtacaaaatttagaagaaaaaataagctaaaagtatggataagtgagaaaaaaaagtctacttggccgcctccattgcatctctacctcccaccccctctctctctctgtgaaaacagagcatgtgttcatgtgatggtgatggttttgtttattgggggtgatggtttttggtttgagatgtgtggttttcgcgtgttaattttccgtttccttggtgttctctgtgcagggtttggattttgtgctgtctgaggctaggaagtatgggatcaaggtgatactgagccttgtggacaactacgactcttttggcgggaggaagcagtatgtgaactgggcaagagcgcaggggcagggcattgggtccgacgatgagttcttcaccaaccctgttgttaagggcttctacaagaaccacgtgaaggtaacagcggcaataaattccgagaaaatatctaccgtttagtacgtgaagtaaaccatagctatttctactttctaggatatatggggttctttgtttccttcgtatttcaaaagatggttcctttgtttcatttttgtgttgtttccattttatgatctatagactatagttaagaagaaaaagctatcgaggttagtttcaccaagaagaacgtttatctcattgttttgatatacccgcaaatgctgcggtgaaatattcgtccctgagaatagcaaaggtagaatgaccaatttaaggcaaacacggatagagcgttcgttgaaatgcagcgtgatgcgccgctactagtacagtatcttgccgcaaatttattgggaagacgcattcctatgcacactccagagcggcaactgtggcttgtagtggactagtggtacttcctccgtcttttcttttgtgtattagtattgaattttcttttgtgtatgtgtcaagtattacctcaatcccaaaataattatgattccaagttatttaacatggagtatactaagatttactaaataaggtatctctcgttaaatggtgtatagataagagcagtacgctgattcagggtagaataaagagaaatttaaatcagaagtgacaataagataattagtactccatccgtttcaaattataagatattttgtctttggttaaagtcaaactgcttcgagtttaactaagtttatagacaagtatagtaatatttacattactaaattagttttactaaattaataattaaatatatttttaaataaatttatcttgggtaaaaaatattactattttttataaatttggtcaaacttaaaacaatttgactttaactaaagtataaccttaaacggagagagtaattcattatgataactatgttaggataaatttaaatctaagaaataggacggtgaggcggagatactactgttgatttaatactgtgactgtcggtggactggtctgaactttccaaaaagcacactagtggtggtaaattcttcaagaacaggcaggactctgtcatcagaacgttgcgcatggcagcactacctttttcttctctttgcactgtcggatgcctctgcaatatcgttgctctgctgcatcagacagttggtcaaacaccacagggccccatcggataagtgctttagtgcagtccaacccataacaacccataacactagacatagtttctataaacttaacatcatcaagaaactagtactagacaccacttttccaatacaaacaccactatttcatacttcaatttaatactacttatctcacatgatgttttggatgttgtgtagaaaccatgtctcatgcaaaatatggtttccttctctttccttatttattcacttgtcacatcatttttttttctaagtggcaacttatttaatactatggacaccatcctagttattgggttgggaatgcccttattagtgctcaatagtgtcgcgcccactccatgatcacgttactttatcagtcaggaaatatagatgccacaattctctagaaattctgttgattctcacggcacgcttctgacgatcaactttgcttttgtctgatgatgatgggcgaagacggtgttgacgaggaagaacacgatcacgggggtggcgtacagggacgacccgaccatcctggcgtgggagctgatgaacgagccgaggtgccagtccgacctgtccggccgcaccgtccagtcgtggatcaccgagatggcggcgcacgtcaagtccatcgaccgcaaccacatgctggaggtcggcctcgagggcttctacggcgcctcctcgccgtcccgcatcgccgccgtcaacccctccggctaccagctcggcaccgacttcatcgccaacaaccaggtccccggcatcgacttcgccaccgtccactcctaccccgaccaatggtatatgactgacctcttcgtcgtcgtcgtcaccggtcgatggatcgatcgatcaacgacggccatggctgtctaaatgctaagtgatgaaaccgacaaatgcatgtgtggcgcgtgcaggttgtcgggcaaggacgaccaggcgcagctggggttcatggggaggtggctggacgcgcacatcgcggacgcgcaggcggtgctgaggaagccgctgctgatcgcagagttcggcaagtcgtggaaggacccgggctacagcagcgggcagcgggacgcgctctacggcacggtgtacgccaagatctacgagtcggcgcggaggggcggcgccacggtggggggcctcttctggcagctcctggtgcccggcatggactcgtaccgcgacggctacgaggtcgtcttcggtgagacgccgtccaccacgggcgtcatcaccacgaacagccggcggctgcgcttcctcagcaaggcgttcgcgcgggccaggcaggcccagccggcgagggggaagggccgacacaacggcgggaaatagagattgaccgctgattaggcccagaaagtggtagtaaaagaaagaaaggcttggtttgatttgtgtgttttacttcatgtgtgggaggtacgtgagtgtgagttgatggctcctcgagatgatttaagattcatccgggagagaaggattagtatttgtcatccttcttggtgccttgggaggacgtgtgtttttaggtgttcttaattatgtggaccacgaagtagccactctgtggtgaagttttatggtacctggctatggaagaagccagccagtgattacaaattacttacgtacttcacactagtataatactcctatatgaatgatgttttgctg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0663300, RefSeq:Os01g0663300