Difference between revisions of "Os01g0666200"

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(Created page with "{{JaponicaGene| GeneName = Os01g0666200| Description = High mobility group box domain containing protein| Version = NM_001050334.1 GI:115439038 GeneID:4326858| Length = 33...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0666200|
 
GeneName = Os01g0666200|

Revision as of 18:55, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0666200

Description

High mobility group box domain containing protein

Version

NM_001050334.1 GI:115439038 GeneID:4326858

Length

3356 bp

Definition

Oryza sativa Japonica Group Os01g0666200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:28992365..28995720

Sequence Coding Region

28992466..28992644,28993690..28993747,28993818..28993862,28995299..28995379,28995472..28995510

Expression

GEO Profiles:Os01g0666200

Genome Context

<gbrowseImage1> name=NC_008394:28992365..28995720 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:28992365..28995720 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagacgaggtcgcagacggcgccgaagccgctgaaaacggtgcggctgcctcctgtcaagccgcggcccaagccgccgccgccgcagccgcagccgccgccgtcccggaagaaggggcagcccctcgtcgaccggcgccgccccaagaagccgcccaccgccttcttctacttcatggaggattttcggaaaacttacaaggaagaaaatccaagtgtaaaatcaatgcaagaagtagggaaggcatgtggcgagaaatggaatacaatgacatttgaggaaagagtgaagtattatgatatagcaaccgagaagcgtgcagagtatgagaaggcggtggctgaatttgacaagaaaaaggaaagcggtgaattgtccgaggaatcagattacgactag</cdnaseq>

Protein Sequence

<aaseq>MKTRSQTAPKPLKTVRLPPVKPRPKPPPPQPQPPPSRKKGQPLV DRRRPKKPPTAFFYFMEDFRKTYKEENPSVKSMQEVGKACGEKWNTMTFEERVKYYDI ATEKRAEYEKAVAEFDKKKESGELSEESDYD</aaseq>

Gene Sequence

<dnaseqindica>102..280#1326..1383#1454..1498#2935..3015#3108..3146#ctttcgccgctgcaaacctccgtctcctccggctccggctgctcggggcctaaaccctcgccgcgtgtactaaaaaccccggcggcccaggcggcggagggatgaagacgaggtcgcagacggcgccgaagccgctgaaaacggtgcggctgcctcctgtcaagccgcggcccaagccgccgccgccgcagccgcagccgccgccgtcccggaagaaggggcagcccctcgtcgaccggcgccgccccaagaagccgcccaccgccttcttctacttcatgtgcgtgtattatctggttccctttctctttgtgtggatttgcctggtctgtcagtgcgtgccgtggctggctcttgccacgaggtgattggtgctgctgttaccgggggcttatttctttttctttttattaatcgaattgtttccttgcatagattagaactttgttttaggagcttttttactcaccaacttcgaattgagtggtgccttggtggtaatacggtgcagcaagttcgcatgcgaaatatttacgatactgcctccggtccgtggcaattaggaaaatggttgggtatgttagggactgaatttactaggttttacagggcatctcaatctgaggtgcatttttcgatctgttccctagtcatggatggactcattgttgtagcttgtgcaatcaggtttcaccccaagtttatgtagattggcattgtttacatctcattttggaaggctgggatcctagattcctatttgagttatcctgcgatattatataggattgccctgttctttattagaatttgattgtttttcctaaagacggagtgaggcaggttattttgtggtcctatcttgggagttggcaactgaaactatgcaccactttttttttgagtaccaaagtgtgtgcttcccctgcaacatatgcgaagggcacagcctttacctaattgaacaggcatatctgatgctccttgtccacaattgcatcgaaagatgtgtggttactgatataaaatgaatgcatatgtttttgacttggtcatgcttttgatggttacgaagtgttttagctactgatagagagtaatggcaacatttacatgctaccataattgtctagatgctttataccgcatccagtcatcaacattaaacatagtgcttacttccttgaggtgtttcacataaatttagccatttaggtgtaaccaaaacacaaaagttactctgttgtttttgcctcttattttcatatcttgtactgaatcaactcagtcaagttttactgaaaaactgttatggtctgctgaagggaggattttcggaaaacttacaaggaagaaaatccaagtgtaaaatcaatgcaagaagtaagtttccatcagttaacgttgaagctttaagctacttagtcatctagtaatatatcttaccctgcaggtagggaaggcatgtggcgagaaatggaatacaatgacatttgaggtttgtgatttcaccttagtgatgtttgtggtcaattaggtctctagttgctgtaaattttctatcactcaagtaccaaaccatgcttctctgtaagttgtaacgcatggctgttttggtttgaagccaaaacttgccctaccaaaatgttggcttcttgtatagtaatttggcaccatttggtttgctaccaaaatttacctacaccacacaaaagttgccaaaaatctggaagtgccaaaacttgcctatgttttggcattgccaacattttggcatggtagcaaacccaacaaacacataaaatgattgatagaaacatgatggcaccacaaatctgtacatgcggagttgagatgtatattgacttattcttttgtttcaaaatcactttttttttaaaccatcaagcagaagttcctgcttcagtgtattgtattagtaaggtttaatttcaaagtttaaaaagggatatttgagccatatctgctcttttttgtctactgtttatgtgcctagtgttaaaactagataactaatctatttattctaaacttccttgaattaactggtacagcctacaaaaaaagtgatcattgagtctaggcctctagggagtaattctaacgaaatagctgaaggatcggattgacatatattgcaactgtagaagctttgtagccgatacgctcaaacagctaaagtaatacattgacatggactgtaactgtagaagcccaagaatgtactttgtaggtgttacatctactgttcagttggataatggtacatgattgcatatttactttttcccccttttgttcagtaggttcattccatgtatgtttagtatagtcgcatttcaaaggatttggtgccaactgccaaatacccatgtttcctatttttttcatgctaccaacccatagggaaaacaaaagaaggtgctactgctgtgaagcatatcaagatcacctgtggattccttagagctttaaataccagatatgtagtttggaattttcctttttagaaatcatagtttggaccaaactgccagttgaaccaggaaaagatagaaattgttggctccagcagtttgggttcactcaaagaccattcatgcaatcaaagccagaaaaggccgggtgaactatttgtgttgttttgaacttttgattggtaaatatatatttcctttgttttttcaggctcttcttttgggttcttaaataatactatgctttcaaattatcagtttagtacacagtggactatgtaggaattctgactcattgtcaaaataaatggtctaggcaatacaatatctcatatcagatatgtacagcttcatttcacatttttgcgcattgcattttagacataaactcatatcatacttatgtcaacaatttcacttttgttcattacaccaggaaagagtgaagtattatgatatagcaaccgagaagcgtgcagagtatgagaaggcggtggctgaatttgacaagaaaaaggtgtattttctgcatatatattgcacgtgtttttttcgtgtctattcaatttttccatgcaaaaaatcatacttaccttattttcaatgcaggaaagcggtgaattgtccgaggaatcagattacgactagaggtgaacgtcgggtagttgttccgatggttcacccaagtaattggatggacgaatcaattgtatattacagaactgaggcactgagctttgtaatggaatctatatatagtcagtttcctgctcattctagagtgaactatcgtcttgtgataaagtgatagctttggatcgagtattcgctggtacaccaccagtgcttgaaataact</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0666200, RefSeq:Os01g0666200