Difference between revisions of "Os01g0772800"

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(Created page with "{{JaponicaGene| GeneName = Os01g0772800| Description = Similar to Signal recognition particle 54 kDa protein 2 (SRP54)| Version = NM_001050930.1 GI:115440230 GeneID:4324712...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0772800|
 
GeneName = Os01g0772800|

Revision as of 18:59, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0772800

Description

Similar to Signal recognition particle 54 kDa protein 2 (SRP54)

Version

NM_001050930.1 GI:115440230 GeneID:4324712

Length

4052 bp

Definition

Oryza sativa Japonica Group Os01g0772800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34408328..34412379

Sequence Coding Region

34408627..34408857,34408939..34409038,34410044..34410197,34410277..34410427,34410513..34410661
,34411145..34411245,34411318..34411475,34411616..34411730,34411800..34412131

Expression

GEO Profiles:Os01g0772800

Genome Context

<gbrowseImage1> name=NC_008394:34408328..34412379 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:34408328..34412379 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgctcgcgcagctcggcgggagcatctcccgcgcgctggcgcagatgagcaacgccaccgtgatcgacgagaaggtgctcagcgactgcctcaacgagatctcgcgcgcgctcctgcagtccgacgtccagttcaagatggtccgcgatatgcagtccaacatcaagcgcatcgtcaacctcgagacgctcgccgccgggaccaacaagcggcgcatcatccagcaggccgtcttcacggagctctgcaacatgttggatcccgggaagccttccttcactcccaagaaggggaaaccttgcgtggtcatgttcgttggtttgcaaggttctggtaaaactactacttgtaccaaatatgcatattatcatcagcgcaagggatttaagccagcacttgtttgtgctgatacatttagggctggtgcttttgatcagttaaaacagaatgcaacaaaggccaagattcctttttacggaagctacatggagtctgatccagtgaaaattgctgttgagggtgtggagaggttcaagaaagaaaactgtgatctcatcattgtagatacgagtggaaggcacaaacaagaagcagccctttttgaagaaatgcgccaagtttcagaagcgacgaaaccagatctggtaatatttgtgatggacagtagtatcggtcaggctgcatttgatcaggcacaagcatttaagcaaagtgtttctgttggtgctgtgattgtcactaaaatggatggccatgcgaaaggaggtggcgcacttagcgcggttgcagcaacaaaaagtccagtgatatttattggaacaggagaacacatcgatgagtttgaagtttttgatgtgaaaccatttgtcagtcgtcttttaggcatgggagactggtcggggtttatggacaagattcatgaagtagtacccactgatcaacaacctgagcttttgcagaagctgtctgaaggaaccttcactctgagacttatgtatgagcagttccagaacatcttgaaaatgggtcctattggccaggttttctcaatgttgcctggatttagttctgaattgatgccaaagggacatgagaaggaaagccaagctaagattaaacggtacatgacgatgatggattccatgacagatggagagcttgacagcacaaatcctaaattgatgactgaatcgcgtattcttcggattgctcggggatctggccgacctgtcagagatgttgtcgacatgctcgaagagtacaagcggcttgctaaaatctggagcaagatgaaagggctcaagataccaaagaaaggagaaatgagtgcactgtcccgcaacatgaacgttcagcacatgagcaaagttctcccgccgcagatgctgaagcagataggcggcatgggtggcctgcaatctttgatgaaacaaatgggctcaaaagaaatgggtggcatgtttggaggcatgggtggtgataagtaa</cdnaseq>

Protein Sequence

<aaseq>MVLAQLGGSISRALAQMSNATVIDEKVLSDCLNEISRALLQSDV QFKMVRDMQSNIKRIVNLETLAAGTNKRRIIQQAVFTELCNMLDPGKPSFTPKKGKPC VVMFVGLQGSGKTTTCTKYAYYHQRKGFKPALVCADTFRAGAFDQLKQNATKAKIPFY GSYMESDPVKIAVEGVERFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVI FVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTG EHIDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPTDQQPELLQKLSEGTFTLRLMY EQFQNILKMGPIGQVFSMLPGFSSELMPKGHEKESQAKIKRYMTMMDSMTDGELDSTN PKLMTESRILRIARGSGRPVRDVVDMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNM NVQHMSKVLPPQMLKQIGGMGGLQSLMKQMGSKEMGGMFGGMGGDK</aaseq>

Gene Sequence

<dnaseqindica>300..530#612..711#1717..1870#1950..2100#2186..2334#2818..2918#2991..3148#3289..3403#3473..3804#tattattattcttttgaaaaaaagaatagtgttacacacacgcgtactccgtgccttcccgtcggaggaatccccggtattcaaccgagtcgccccccatctgaggattaccaccacctccacggctccacctccgcggcggcgtaatccatccaactcgcaatagatatacagtccccccaatcgacggaaccctaattctctcccgcacgcgcgtcggcgatccgaggggaagtagggtttggaggaggaggaggggagaccaccggaggtaggcgaatcccccaaggccgggcaagatggtgctcgcgcagctcggcgggagcatctcccgcgcgctggcgcagatgagcaacgccaccgtgatcgacgagaaggtgctcagcgactgcctcaacgagatctcgcgcgcgctcctgcagtccgacgtccagttcaagatggtccgcgatatgcagtccaacatcaagcgcatcgtcaacctcgagacgctcgccgccgggaccaacaagcggcgcatcatccagcaggtgagcccccctgcccccttcgcatcggtgtaatttgcgggtaatttgcagcatcttgttgactgatggtttgatggttaggccgtcttcacggagctctgcaacatgttggatcccgggaagccttccttcactcccaagaaggggaaaccttgcgtggtcatgttcgttggtttgcaaggtcagtctagctgctgctgagttatgccccaattaattacttctgctgctttctcttttatgataatttcggtttattacatctgtacaaggtaagaatgtagaaagtagaattgtcctatctatcacgactttttattagacactttctgaatcaccatgatcttagctgaatttgagaactttgcctcagcgaatgattctgaaagggaacttgataaattagttcaaacagaaggatgtgatagtattaactattaagtggtttctcttctgattttattgccaggcagaataaataaaaatgaattggtcacacaagtatggttatcctaaccattcatgtgcatggtccagttaatggctagtgttagcatgactgttgcaaggatgctgcaagttttgtttttcttattttagtttcatgttcttctgtttagtcaaaaagcagagcagctgaataaatcatgcacgtatcgagtagtttgtccaacagctttatttattggagtactttagttttcctttttaagaaccgtgggttcctattgtggtcttgtagttaggcttatcatgtgtgacatggtttatctgttggatcatcccattcagaagcaatgaatcatctaagtattttatattattaagtaatcctaaattgggtcttgcacgaagacattcatctagtttttttccttatctgggcttgtgtatgatgcatcatgaacagatatactctatcacttttttactcttttttttttgcaattggacactataaccagaattttttatggcttcccgatggatggatctgttgcaaatatgtgcaaaattgcaagttttgtcattcttgtcaaactacctggcttagcaatgaaccctgttgtttgctttagccacaaagaccaatgttctgttctgtttggcttttatcttctgctttttagattcattaatagaattgcaatattccattcccatgacaagcaccgtgtccatgcaggttctggtaaaactactacttgtaccaaatatgcatattatcatcagcgcaagggatttaagccagcacttgtttgtgctgatacatttagggctggtgcttttgatcagttaaaacagaatgcaacaaaggccaagattcctttttacggaaggtgctatattttgtctacctttaacttttgtttaaccttatgtattcttttttcccccctaatgggtgtcttgttgcagctacatggagtctgatccagtgaaaattgctgttgagggtgtggagaggttcaagaaagaaaactgtgatctcatcattgtagatacgagtggaaggcacaaacaagaagcagccctttttgaagaaatgcgccaagtttcagaagcgacggtaatatagtcaaaattttgaagtacttcgagaaacaccctgattatagtgaaaaactaaaacacatttttgtgcttctctgcagaaaccagatctggtaatatttgtgatggacagtagtatcggtcaggctgcatttgatcaggcacaagcatttaagcaaagtgtttctgttggtgctgtgattgtcactaaaatggatggccatgcgaaaggaggtggcgcacttagcgcgttagtattctcttctttcccttgcgatagcatatttgttctattctctttcccacttcatgagtactgtttccatataatctgaaagagatcttgtgtgaactttgggtcatatttaaaacaagaactcttatagagccctgttttattctagataaccatatagtgtcaagtcaaccatgaagtttagttcagttaatgcaaattttattttaagtacctgagcttggtgaaatcatgatattgtggcatttagatgtggtatccgcaaaacagtttcatcatattgtatgtgcttcaggatagcatactttaaaagttcaaagtgcagagatcctgtgtgcacgacactttctctgttcatgtagtcatttccttttgtgaaaaatgccttatttagggttgatactgtgaatgaatacctattaacatttcagaatctgttaatgacttatcatatctgacacccttgtttctttacagggttgcagcaacaaaaagtccagtgatatttattggaacaggagaacacatcgatgagtttgaagtttttgatgtgaaaccatttgtcagtcgtcttttaggtcagtgaaaatactacgtgtcccatgttgctgagtgtttcttatggttaacctttgtagtgtaattgacaggcatgggagactggtcggggtttatggacaagattcatgaagtagtacccactgatcaacaacctgagcttttgcagaagctgtctgaaggaaccttcactctgagacttatgtatgagcagttccagaacatcttgaaaatgggtcctattggccaggttagcaacatcttttacttgcggtgaaatgaaacgtacagctcatgatgtctgtttacttgtttaattgacatgcccagggttcatttcttttaagattatcacagcacgcttttaaatctggattggtgtgtttgcaggttttctcaatgttgcctggatttagttctgaattgatgccaaagggacatgagaaggaaagccaagctaagattaaacggtacatgacgatgatggattccatgacagatggaggtgagtgtgtggttgatgatttccccctgtatacttatttattatgctgatgtcaaaattttatctcagagcttgacagcacaaatcctaaattgatgactgaatcgcgtattcttcggattgctcggggatctggccgacctgtcagagatgttgtcgacatgctcgaagagtacaagcggcttgctaaaatctggagcaagatgaaagggctcaagataccaaagaaaggagaaatgagtgcactgtcccgcaacatgaacgttcagcacatgagcaaagttctcccgccgcagatgctgaagcagataggcggcatgggtggcctgcaatctttgatgaaacaaatgggctcaaaagaaatgggtggcatgtttggaggcatgggtggtgataagtaaacagatcctgattgcatttgacaaatcgtcagagatatggctgtagacagattgttcaccagggtgctaaatgagagttttgaagatgatactgactgctgcaattatgttaccagatgaggatacacatgcaccccgatgtaaaatttgtttatcataggcaaatcgtagctccccaaagttcttaccgagattttatttatagaatctgtttgggaagaattaccgaatccgcgttttgttttgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0772800, RefSeq:Os01g0772800