Difference between revisions of "Os01g0777300"

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(Created page with "{{JaponicaGene| GeneName = Os01g0777300| Description = DNA repair protein (XPGC)/yeast Rad family protein| Version = NM_001050956.2 GI:297597716 GeneID:4327899| Length = 6...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0777300|
 
GeneName = Os01g0777300|

Revision as of 18:59, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0777300

Description

DNA repair protein (XPGC)/yeast Rad family protein

Version

NM_001050956.2 GI:297597716 GeneID:4327899

Length

6382 bp

Definition

Oryza sativa Japonica Group Os01g0777300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34649248..34655629

Sequence Coding Region

34649281..34649441,34650177..34650296,34650566..34650689,34650812..34650949,34651080..34651289
,34651673..34651847,34652105..34652178,34652625..34652751,34653043..34653389
,34653497..34653551,34653675..34653970,34654068..34654119,34654328..34654535
,34654652..34655075

Expression

GEO Profiles:Os01g0777300

Genome Context

<gbrowseImage1> name=NC_008394:34649248..34655629 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:34649248..34655629 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggatccagggattgctgccgcagctgaagtcgatcatggcgcccatcggggtggaggcgctcaagggccagacggtggccgtcgacacctactcctggctccacaagggcgccctctcctgcggcgaccgcctctgcaagggcctacccaccaccaggcatattgagtattgcatgcatagggttaacatgttgcggcaccatggcgtgaaaccaatccttgtatttgacggaggtcatctgccgatgaagggtgatcaagagactaaacgtgaaaggtcacgaaaggaaaatcttgagcgtgccaaggagcatgaatctgctgggaattcacgtgctgcttttgagtgttatcagaaagctgttgacattacacctaggattgcttttgaactgatccaggtattgaagcaagaaaaggttgattatattgttgcgccttatgaagcagatgcacaaatgacattcttgtctgtgaacaaacttgttgatgccgttatcacagaggattctgatctgataccatttggctgttctagaattattttcaagatggacaagtttggacaaggtgttgaatttcatattacacgattgcagcgatgcagggagcttgatcttaatggattcactatgcaaatgctactagagatgtgtattttaagtggctgtgattatcttccatcattgcctggaatgggtgtgaaacgagctcatgcacttatccaaaagctcaagggtcatgaaaaggtaatcaagcacctgaggtacagtgctgtttctgttccacctcaatatgaagaaaacttcagaaaggcgatctgggcatttcagttccaaagagtttatgaccctgtgacggaagatattgttcatttgtcaggcattccccatggcagtagtgaagacttggactttttgggcccatggctaccacagactgttgctaaaggcattgcccaagggaatatcgatccgattaccaaggaaccatttgagggcaaaacagagagtagcgcactcgcttttgataaagtgcatctgaacagagagtccagtgctccttcaaatggaaagaaaaagcttgatctacctgtccaaagaaacgtattgacaaattacttctgcttagcatcgcttgaggcaaaacggaagttcagagcacctaaggttacacctaagcaacaagtacttaatgggtctttgcccagtcccagaattgaagactctggtacccctgatttaattgaagatactagcttgccatcaaataacattcaagtttatcagtgtagttctgagcattttagctcaggaacccctctagatgattcaatcaataccgcctctcaatgtagttctgagcgtgtccgctgtgacatccctcgggatgattcagccagtgtttcaccccagtgttctcatgatattggtagtgatcctgctgaggacccagacattgaaggcaacaaggtgaaagtcaacttctgcaacagaagtacaataccgacaggctctttcttagaggggactttgcctgggatatcagatccatttttagattcacacaacacagagccatccagagctgcaccacgttatgctgaaaaaagcaatgtggtctctgccaatagaaatattactgtgaggagttcatatttcaaaacagtaaataaaagagtttgcacaaatcaaggagaagatgagtgccatgatgaagataactgcgagactggtaattacactcttcctggagatcaacaaagaagctctggaggtatattgaagagaagaaaatttagtgatccccaaaattttgaagatggaatgtttcaacccactagtcctcatgaaagtccaccggttgctgataaaggctgtgactctgattcccacgacggtatcaacacaaattctgaaggaaaatttggatgcaatgtcgcccatgtaaataaatacagtggcattgcagagaaatcaatggataagtttgctgcgctgatatcatctttcagatacgcaggctctcgtgccagtggtcttcgcgctcctttaaaggatgtgaagaacactcttcctgtcagatctgttctcagacctccagaacagagattcggttgtacggctaagaagactactagagtgcctctacaaagcagattctcaagtgatgctacaaacagcactgacgttcctgatctgagcacatttgcatacaggcctacaactgcttctgctcattctgatcaggggaagatcacaagcaaagctacagatgctgctgctggacctcctgacctgagaacatttgcttatgcaccaacaagatctaccaccagccgttttgatcagagtgaaaacacgcgcaaagctatgtgcactgcggacagccctcctgatattagcacattcgaatataaacccatgaaaagcgccgtcagacgttcagatgggagcaagttttcaggtgcagcactaaaagcagctagacgaacctctcggagctga</cdnaseq>

Protein Sequence

<aaseq>MGIQGLLPQLKSIMAPIGVEALKGQTVAVDTYSWLHKGALSCGD RLCKGLPTTRHIEYCMHRVNMLRHHGVKPILVFDGGHLPMKGDQETKRERSRKENLER AKEHESAGNSRAAFECYQKAVDITPRIAFELIQVLKQEKVDYIVAPYEADAQMTFLSV NKLVDAVITEDSDLIPFGCSRIIFKMDKFGQGVEFHITRLQRCRELDLNGFTMQMLLE MCILSGCDYLPSLPGMGVKRAHALIQKLKGHEKVIKHLRYSAVSVPPQYEENFRKAIW AFQFQRVYDPVTEDIVHLSGIPHGSSEDLDFLGPWLPQTVAKGIAQGNIDPITKEPFE GKTESSALAFDKVHLNRESSAPSNGKKKLDLPVQRNVLTNYFCLASLEAKRKFRAPKV TPKQQVLNGSLPSPRIEDSGTPDLIEDTSLPSNNIQVYQCSSEHFSSGTPLDDSINTA SQCSSERVRCDIPRDDSASVSPQCSHDIGSDPAEDPDIEGNKVKVNFCNRSTIPTGSF LEGTLPGISDPFLDSHNTEPSRAAPRYAEKSNVVSANRNITVRSSYFKTVNKRVCTNQ GEDECHDEDNCETGNYTLPGDQQRSSGGILKRRKFSDPQNFEDGMFQPTSPHESPPVA DKGCDSDSHDGINTNSEGKFGCNVAHVNKYSGIAEKSMDKFAALISSFRYAGSRASGL RAPLKDVKNTLPVRSVLRPPEQRFGCTAKKTTRVPLQSRFSSDATNSTDVPDLSTFAY RPTTASAHSDQGKITSKATDAAAGPPDLRTFAYAPTRSTTSRFDQSENTRKAMCTADS PPDISTFEYKPMKSAVRRSDGSKFSGAALKAARRTSRS</aaseq>

Gene Sequence

<dnaseqindica>34..194#930..1049#1319..1442#1565..1702#1833..2042#2426..2600#2858..2931#3378..3504#3796..4142#4250..4304#4428..4723#4821..4872#5081..5288#5405..5828#gagagagagagagagagagagagagaggcggcaatggggatccagggattgctgccgcagctgaagtcgatcatggcgcccatcggggtggaggcgctcaagggccagacggtggccgtcgacacctactcctggctccacaagggcgccctctcctgcggcgaccgcctctgcaagggcctacccaccaccaggttcggctccggtgacctccccccttttcttggaacccagggtttcttaatccatttcgccgattggtgagacctaaatcgacggatccgggaaatctacttcttccccacgagcgtattgacagctgctggtcctaccaggggtttcttccgattttgttttcttggtcccgactggtgaaatccatttcggaggaggggtaaaaggcacgtcttgcttcggatgagagatttccgcattttttaggtgggtgtaggaaggggggggggatttcttgtttgttcagtctctctcaggattaaggtaataaatgtgcggcatttgttttcgcccccttccaggggcagtacatttactgaaatttgttatccgcctcagtgcccagattcttgtatgtctaggttgcattgaataaaatacacacttgggagagatccgctgcttggcatctggtgccgctttagttcagagaattcaccattttagtttgtggaatttttattggaaatagcttagacatgaatagttcaataaacgttaacaatagcttagcattgttagtagtatctttttactgtatgggatatcttctaacattgctgcatttttgatgtcgtgaactcataatgcggagggccatagatttgcaactccagtttttatcatcatttatcaccgttgtagttgagcaccataacttacaccttgtgtttcccctcctgaatctgaaccaggcatattgagtattgcatgcatagggttaacatgttgcggcaccatggcgtgaaaccaatccttgtatttgacggaggtcatctgccgatgaagggtgatcaagagactaaacgtgaaaggtatgttctttcttagggctccagaaagagcctaacatgtttcagttgccaaggaacatctacattacccttacagaacattaaaaaaaattgtgatttgacattttacatacggctatagttatggacaactgtggctttaggctgatatagagcagtcgcattattagtacagactagtggataagctaaaggcctccagccattctttgctatgtgatgtttcttgagtcattggatgctaagcaagtaagcatgacatcctgtaggtcacgaaaggaaaatcttgagcgtgccaaggagcatgaatctgctgggaattcacgtgctgcttttgagtgttatcagaaagctgttgacattacacctaggattgcttttgaactgatccaggtaaaggagcaaattccatgtatttttaccaaatatttaccacctatttgaagcagttctagtcaggagtaggaacatttggcttgtcttaactgattattgttccaaaacttgcaatgcaggtattgaagcaagaaaaggttgattatattgttgcgccttatgaagcagatgcacaaatgacattcttgtctgtgaacaaacttgttgatgccgttatcacagaggattctgatctgataccatttggctgttctagagtaagcacagtgttaaaacgctttatctttgtcctccacgtaccccatagtattttgctgctcagctagattagtgttcatagtttgttgtaacttctctaattaaaatgcatcttattccattgtgcagattattttcaagatggacaagtttggacaaggtgttgaatttcatattacacgattgcagcgatgcagggagcttgatcttaatggattcactatgcaaatgctactagagatgtgtattttaagtggctgtgattatcttccatcattgcctggaatgggtgtgaaacgagctcatgcacttatccaaaagctcaagggtcatgaaaaggtaaaccctgtatctgttgtatcaaatactaactttaggcctagttggaattggaaagaactgattcatgaactaacatgaacgatgcctgagatagtgttcaagacctacaaagcatggtaagaaaaggctggatagtagaaccagaatgcagttctacttagacataactacagaaggcaaggcctcaacacaaaattgattgcttcaacttttatgaggccaccgtcttgtacttaggtcattagccaatccatagcctgtcatacatgcaggacatgatttgagttactactgagcttgtagggcaacgatgtgcaatcactttcttgcttagcaaattagaaaaaaaaataatgagcaaatgatgcgtataatttcaggtaatcaagcacctgaggtacagtgctgtttctgttccacctcaatatgaagaaaacttcagaaaggcgatctgggcatttcagttccaaagagtttatgaccctgtgacggaagatattgttcatttgtcaggcattccccatggcagtagtgaagacttggactttttgggcccatatccttgccaaacttatatttgtacaatagatgctaaagctcattcatatgataacctgttgttttatccaccataagtccataaggatgaatttccacttttgtttggtcatgtctaatggccattatacaagttgcgttagaaagtaagctaacggcctttcaatgccaccatttctcagtaataccgaattgtgttacttgaagaaaatctcaacttgcatgcattggatcttttccttaattggtttatacatggctaccacagactgttgctaaaggcattgcccaagggaatatcgatccgattaccaaggaaccatttgaggtactaccgatcttccctcggttgttttggtttcttggtgctttgtttccttgaatgtaatttcatcctactctgattctgtgcactgcatatgtataaacatacccaagcatcaatatgcaaatacaaacgaggggctcttgaaaatggttgtaagctcactgaaatatccaatcagaggctacagagcattacagaagctcattagagaaaaacagataaaaatccataaaatattttgtaagaaaaaaatgtagggtcctcactgaaataagaaagtacattgtaagtgatcatggttttactgatgtactctgttttattaaagatcaccagtatgcaagcatttgctttgctgacatgcgaataccaacattcaattttatcttttgtggattgtcttactaagaagttatatatgttttatttgtatatgtgacttgcagggcaaaacagagagtagcgcactcgcttttgataaagtgcatctgaacagagagtccagtgctccttcaaatggaaagaaaaagcttgatctacctgtccaaagaaacgtattgacaaattacttctgtatcctctcaacacattttaatttaattgagagaacaatatatataccaatcaactttattatatgaactacttgttgcagcttatattatgggaatgccttggataagatagttcagttattgtgctttctcgttcccaaacatgtttaggatcaaatgaagaactaataatttccccataaacttatttacgaagtctaaggtgatgtgcgattcttagcatggtattttgcttgttttgtaaacaatacttcaactgtccattggatgaatccttgacttttagaaggcttagcatcgcttgaggcaaaacggaagttcagagcacctaaggttacacctaagcaacaagtacttaatgggtctttgcccagtcccagaattgaagactctggtacccctgatttaattgaagatactagcttgccatcaaataacattcaagtttatcagtgtagttctgagcattttagctcaggaacccctctagatgattcaatcaataccgcctctcaatgtagttctgagcgtgtccgctgtgacatccctcgggatgattcagccagtgtttcaccccagtgttctcatgatattggtagtgatcctgctgaggacccagacattgaaggcaacaaggtatttcacgtttctttattgccttattttcagtgttctcgtagtcctacctttctacaacaatatcgtatttccgtcattcttatagttttacttctgctatacaggtgaaagtcaacttctgcaacagaagtacaataccgacaggctctttcttagagggtaagagctctacctttttgtagttgatgcatgacttgatctgcaaatcatgtactggtatatctaattaaaatgaaaataatcttggtttctgttttgtatgcatttattttcgttttctagggactttgcctgggatatcagatccatttttagattcacacaacacagagccatccagagctgcaccacgttatgctgaaaaaagcaatgtggtctctgccaatagaaatattactgtgaggagttcatatttcaaaacagtaaataaaagagtttgcacaaatcaaggagaagatgagtgccatgatgaagataactgcgagactggtaattacactcttcctggagatcaacaaagaagctctggaggtatattgaagagaagaaaatttagtgatccccaaaattttgaagatgtaagcaatttttttttgagttgttattctatcatcatatcgcagtgaactgtctgtatcattctactatctggtcttgaatgtactatttgtgcagggaatgtttcaacccactagtcctcatgaaagtccaccggttgctgataaaggtaatagttccacctagttgtctgttcttattctctgtgagaatgtgcacctttccttgttccatttctctatagataaacttgtgacgattacaagaaattcagtttttccaaaaacaacagaaggttctgccaatgtttgagtgtgcgtagttccctttttttttgttgctgagggaaatcttctgaatgtctgatactaatgcaggctgtgactctgattcccacgacggtatcaacacaaattctgaaggaaaatttggatgcaatgtcgcccatgtaaataaatacagtggcattgcagagaaatcaatggataagtttgctgcgctgatatcatctttcagatacgcaggctctcgtgccagtggtcttcgcgctcctttaaaggatgtgaagaacactcttcctgtcaggtctgcagcttcagaaaatttcaattgcaccaagttcacacaatttacttatcagaacttaagagggggacacagttgtcccaatgagttgatatattttataacattaattgcagatctgttctcagacctccagaacagagattcggttgtacggctaagaagactactagagtgcctctacaaagcagattctcaagtgatgctacaaacagcactgacgttcctgatctgagcacatttgcatacaggcctacaactgcttctgctcattctgatcaggggaagatcacaagcaaagctacagatgctgctgctggacctcctgacctgagaacatttgcttatgcaccaacaagatctaccaccagccgttttgatcagagtgaaaacacgcgcaaagctatgtgcactgcggacagccctcctgatattagcacattcgaatataaacccatgaaaagcgccgtcagacgttcagatgggagcaagttttcaggtgcagcactaaaagcagctagacgaacctctcggagctgattctcacaaaattgtggatgcacctgccagcttccttatctgagcatgtttggatttgcgtatgccttctgtctgcgttcatgatctgagttcaacagaatcatccagcaacaaatgctctcaataaaagtgcattccattttgcccaaagtgcaagcacggctgaggtagctgccattcactactactagctgcagggcttatcagttcagacttcagagctcatccgtatctgcgcaatcagaagcacacatgttctgaagggaagtgctttatcttctcggtttccagagccaattatgtggcattttgcgagccaaatgtatgtgctcgtttttgccttgtccaatgaggttcttgtatgaacagcagtcgaatttgcgatgctatttaagccgcaaatgaggatactgttgtattgttcctttttgagaagatactgctgtatgttcattcttatacaagtgtgagcattccttcagaattcagatagcattactcttgtcaactattgatcaagatgttggaaagactttgaaaccggctgtttaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0777300, RefSeq:Os01g0777300