Difference between revisions of "Os01g0802100"
(Created page with "{{JaponicaGene|
GeneName = Os01g0802100|
Description = Similar to 4-diphosphocytidyl-2-C-methyl-D- erythritol kinase, chloroplast precursor (EC 2.7.1.148) (CMK) (4-(cytidine...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os01g0802100| | GeneName = Os01g0802100| | ||
Revision as of 19:00, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os01g0802100 |
|---|---|
| Description |
Similar to 4-diphosphocytidyl-2-C-methyl-D- erythritol kinase, chloroplast precursor (EC 2.7.1.148) (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl- D-erythritol kinase) (CDPMEK) |
| Version |
NM_001051079.1 GI:115440528 GeneID:4327968 |
| Length |
5239 bp |
| Definition |
Oryza sativa Japonica Group Os01g0802100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:35727072..35732310 |
| Sequence Coding Region |
35727158..35727346,35728252..35728347,35728443..35728511,35729232..35729336,35729440..35729496 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:35727072..35732310 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:35727072..35732310 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcttgctccacccacctcctgtcccagagcctctacccgctcaaccgcgctaacccggcagccgcgcgcgggcacctccggttccaggcttctcccagtgtgaggctcggctccggcaccagtcgccgccgggcgctgggcctgagagtcgccgcgtcggcggagcaagggaggaggcaagtggaggttgagtatgatctacaagcaaagttcaacaagctagcggaccaaattgaccagaatgctgggattacacggctgaacctattctcaccttgcaaaattaatgtgttcttgaggataacgggtaagagaccagatgggttccatgacctggcttctctgtttcatgtgataagtttgggtgatactatcaaattctcattgtcaccaagtaagagcaaagatcgcttgtcaaccaatgtagcaggtgtcccagttgatgaaagcaatttgatcatcaaggcactcaatctttaccgcaagaaaactggaactgacaactttttttggattcatcttgataagaaggtccctactggtgctggtcttggtggtggaagcagtaatgctgcaactgcgctgtgggccgccaaccagtttagtggctgcattgcttcagaaaaggagcttcaggagtggtctggagagataggatcggatattcccttcttcttttcacaaggagcagcgtattgtaccggtagaggagagattgttgaagatattcggaatccattgccagcaaatttgccgatggtactagtaaagccacctgaagcatgctcaacagctgaagtttacaagcggctcaggttagagcacacaagtcaaactgatcccttggtattgctcaaggaaattactgaaaatgggatatcacaggatgcctgtgttaatgatctagaacctccagcatttgaggtgttgccatcactaaagaggttgaagaaacgtataattgctgctaaccggggagattatgatgctgtttttatgtcaggaagtggaagcacaattgttgggattggttcaccagatccgcctgcatttgtgtatgatgatgatgactacaaggatacttttgtgtcagaggcctgcttcctcactcgtaatgagaacgagtggtacagagaaccaatctcatcgaaaatcactagcgaggaagatttacctccggaggtagcatcagtttctgactga</cdnaseq> |
| Protein Sequence |
<aaseq>MACSTHLLSQSLYPLNRANPAAARGHLRFQASPSVRLGSGTSRR RALGLRVAASAEQGRRQVEVEYDLQAKFNKLADQIDQNAGITRLNLFSPCKINVFLRI TGKRPDGFHDLASLFHVISLGDTIKFSLSPSKSKDRLSTNVAGVPVDESNLIIKALNL YRKKTGTDNFFWIHLDKKVPTGAGLGGGSSNAATALWAANQFSGCIASEKELQEWSGE IGSDIPFFFSQGAAYCTGRGEIVEDIRNPLPANLPMVLVKPPEACSTAEVYKRLRLEH TSQTDPLVLLKEITENGISQDACVNDLEPPAFEVLPSLKRLKKRIIAANRGDYDAVFM SGSGSTIVGIGSPDPPAFVYDDDDYKDTFVSEACFLTRNENEWYREPISSKITSEEDL PPEVASVSD</aaseq> |
| Gene Sequence |
<dnaseqindica>87..275#1181..1276#1372..1440#2161..2265#2369..2425#2582..2782#3432..3524#3587..3686#3839..3938#4386..4471#4811..4920#aatccccgtcatctccaagagccttcacccattgcgctcctcttcgcctctggtaagcagcagcagcagcatccgcaggagcagccatggcttgctccacccacctcctgtcccagagcctctacccgctcaaccgcgctaacccggcagccgcgcgcgggcacctccggttccaggcttctcccagtgtgaggctcggctccggcaccagtcgccgccgggcgctgggcctgagagtcgccgcgtcggcggagcaagggaggaggcaagtggaggtaagctgccgtcgcgttcgcccccatattacctgcttggattgggagggattaatttcataatttggattgcagcggagaagcgcgtagaattagctttgatgttcgtccgttttggtttcgtactaaactagaggaatgcacggaggaagattttgagctgatgcaaagcaatcacgctaaactcagaggcgaatcaccagcttgattttgaaaacttcctacgggcgagggcgagctagaggtgccgcgttcagctgtcgctgagccgtcggtggcacgaaggtcccgtcgcgggggacgttccctgccgatcctctcgctcgacgccggagtcgtccatcgctgaattccgtcttgctcggggttggcggtcggacgttcgccgtcggcgtcatttccaccaccagccgcgaccacgtttggcttcttccgtgctgccgcaatctctccccgcgtgcactcgatgataagagagcaaaagtgcaaaacttcccctatttgattggaaccagggcgcaatgccgaagagcacatggatatggataagaaggctgactgcctgctcttggaatcgtcatctgttaattacgttttctccctgttcctgctatttcattgagtatttgtgtttccaaaccaggtctgcactcgcatttcctttccatttcccgggttccaaatggatccaatttcttaatgatgacaccccttggttagatcatcatactataacttctgttgttcagtttgaatcttacccattatgctcaaatagcttcctttcttaatgcttatcctttctttataaattctgttttcttgggagcttctaaaaattcttctgaagtccttttcttttcctgacacaataagtatatagtttataatggtgtgtactttaggttgagtatgatctacaagcaaagttcaacaagctagcggaccaaattgaccagaatgctgggattacacggctgaacctattctcaccttgcaaagtatgtacccagcgattttgttttaagaatagtttaaagcttgatcgtttctattgtgcttctgactcattttatataccttttttttggtgtagattaatgtgttcttgaggataacgggtaagagaccagatgggttccatgacctggcttctctgtttcatgtgagcattttacttgtacctgctttgatatgtcatgcatgaacgtacaaaggtgttttacagttcataatatatccatttttttcaatgttcaaaaatagtttgctgggataatagacattgttattatttgtccaagcaagagactatatgcagcgatcaggaatttatgtgatttaacatgccaaaggacaaaatagaaaacagaaaagtattactggtttactacataaagcaatcactataggaaaaaatatgcaaaaacaatttcatcttctatttcctgacatcaacagacatatgaaactccgaccattcctctttgcaaccttccatggtgtacaacataaatataaatatgctgattctgaatgataaactagagttgttagcgacatttatatttaaaccaaggtgaactcttgactcttgagcaattgcacctgctttgggcaacaggaaaaaaaatatacattaggagttaggaaagggactttatgaacttccgatcacatgctgatatgcacccattttggttcgtgcaattttaaataaaactaacttacaggggcctatgtcgtattgtctgcaattataggatgcaatctaacatatcattatgttacagtggttccttcctattagtgtggtcatatacttattgtgctgcataaatttgttttgatttcacttttaataattctgttaaggaaatcttaggtgataagtttgggtgatactatcaaattctcattgtcaccaagtaagagcaaagatcgcttgtcaaccaatgtagcaggtgtcccagttgatgaaagcaatttggtatgtggctacagatacttctgccattcttcatcttactaataaatgctctatatgtatttctagctgactaactttactattctatttcatgaatctgcagatcatcaaggcactcaatctttaccgcaagaaaactggaactgacaactttttttgggtaatgccaattgcacatttctaccaagggattatacatcaatttttgctactagtataaagttttctctatcaaagagactgaattctgttctgtttattttttttctttggtatgctggggcttatctttacttttctcttaattgaaaaacagattcatcttgataagaaggtccctactggtgctggtcttggtggtggaagcagtaatgctgcaactgcgctgtgggccgccaaccagtttagtggctgcattgcttcagaaaaggagcttcaggagtggtctggagagataggatcggatattcccttcttcttttcacaaggagcagcgtattgtaccggtagaggagaggtatttcacaaactgcttctaattgccgtgaatagtttgtagttcatttcagcatgtacagtgttccctaatttgctcaagttgctgtgttggctgatgtcatgttcttatattgacctttcatctctgtctagcaaccttggtagtacagttcagttttccgaaagtacagtacctctagagttacagtctatatgaatgtattcttattttttagcttgttccatgtttttgcctgtcaacttaatgaaactttttttaccagattatgagcaatatgttgaaatggtttgcaatgaaagccatctcattcttgactagaaactgcagtgtttattgatttgttggtatcaacttattaatggttgcccgcttagttgatttagctggtcatgctattgcaattggctcattatatgctagcgattgcttatttataaaattccccttgctctatctgttccaagtatatggctatatgctctcttagagaggaattgtactaaattgctgcttgaaaaagtacctattagttattaatttgttatttttgacaacattggtatggagatgtatatctttgatcaatattgccttgctccaaaaatgtctgatcataatctccaactctggacttaaatgtatgaagattgttgaagatattcggaatccattgccagcaaatttgccgatggtactagtaaagccacctgaagcatgctcaacagctgaagtttacaaggtaacatattttcatagcatgaattttgaaatgaatcatttactaaaatacttgcactgcagcggctcaggttagagcacacaagtcaaactgatcccttggtattgctcaaggaaattactgaaaatgggatatcacaggatgcctgtgttaatgatctaggtatgcaatttggtatcagcaattgtcgtatgctagtcccgtaccagaacttatgttatattcaataatgtttttaaaattacatccagtaagcatcccctgaaaaataacattcagtgaaatatggtacgtgtgcttgccatcttttccagaacctccagcatttgaggtgttgccatcactaaagaggttgaagaaacgtataattgctgctaaccggggagattatgatgctgtttttatgtcaggaaggtaagggggccacatttttcaatcgcttaagctagttcatgaatttatttattctttttccttttcaattttgaaagcaatcatattcccaaacatagcattcatagtgtagccattttcaaagtgtctctggagagcttcagttatgaaattttggttgtgtaattttcattgatatctaaaatgttaaaagtcaaaaaatgatgtttaattagtcattatattattttagagctttagttatgaaattttggttgtgtaatcaccagttatatcgaaaatgccaaaagtcaaaaaatgatgtttaattaatcattctaccaatttagcatcgtaagcatatttaaggtggaggttatatattgcatatatcaagtatatctatgttttatggaacattgttcaatcataaattacgtgatataatattgtatatgtaccacgcagtggaagcacaattgttgggattggttcaccagatccgcctgcatttgtgtatgatgatgatgactacaaggatacttttgtgtcaggtttgttaagttccccatcactatattcatgttttcatttcagtactgtgacaaggttttacaattgctgaatatatggcaaaactagagggtgtgtttagataatgggaaatgaggagtgggattggaattgggaaatgaatgaaatgtttggattaaatggaacggggagaatgaatggttaggatttaaagatgcattttggtgggtgggaaatcatttccctatcccattagccaaacactcccagagttctaaaatataaatagacacaagagagagagagagagtagctatcatggctgtcatctttaacgttccatgttttttttggtgcagaggcctgcttcctcactcgtaatgagaacgagtggtacagagaaccaatctcatcgaaaatcactagcgaggaagatttacctccggaggtagcatcagtttctgactgagggagtggattctatattagatctcattttgcggttatacaggatacaacatacaggtgtgcactcactgtgattagctttaaaatggtacttccactaggaaaagaaccattccaccttgaaatttgttaacgggactaggagtatcaatcattgattttgaagtgtaggtaagatcgtttactgtgtgtatttgcagcatgcgtcgtagaaacttgttacgggcataccaagtgacacacttgatatgacagaatacatcctccctgcaaaaactgtttgcacttcctgtgagtagaaagcaccaggtttggatttt</dnaseqindica> 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| External Link(s) |
