Difference between revisions of "Os01g0807900"

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(Created page with "{{JaponicaGene| GeneName = Os01g0807900| Description = Similar to Dihydropyrimidinase (Dihydropyrimidine amidohydrolase) (EC 3.5.2.2)| Version = NM_001051108.2 GI:297597814...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0807900|
 
GeneName = Os01g0807900|

Revision as of 19:00, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0807900

Description

Similar to Dihydropyrimidinase (Dihydropyrimidine amidohydrolase) (EC 3.5.2.2)

Version

NM_001051108.2 GI:297597814 GeneID:4327558

Length

10311 bp

Definition

Oryza sativa Japonica Group Os01g0807900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:36051498..36061808

Sequence Coding Region

36057815..36057904,36057998..36058171,36058856..36058910,36058998..36059267,36059469..36059680
,36059864..36059984,36060262..36060349,36060422..36060500,36060680..36060767
,36060900..36060940,36061065..36061117,36061211..36061367,36061450..36061641

Expression

GEO Profiles:Os01g0807900

Genome Context

<gbrowseImage1> name=NC_008394:36051498..36061808 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:36051498..36061808 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatgccctgccgcctccacggcgacatcctgctgctcctgctcggcgccgtcgccgtcgcggtggctcacccggcggcgaacgagttctgcgcggccgtcggtggaggaagcggtggctgcggcgtcggcggcggcggcggaggggacgggaggaggatcctgatcaggggcgggacggtggtgaacgcgcaccgggtggaggaggccgacgtgtacgtggaggacggcgtgatcgtcgccgtgcggcccaacatcccggttggtgatgatcatgtaaaagtgattgatgcaactggaaaatatgtcatgccaggtggaattgaccctcacactcacctggagatggaattcatgggaactgtaaccattgatgatttctttagtggtcatgctgcagcattggctggtgggacaacaatgcacattgacttcgtcattccagtgaatggcaatttaactgcaggtttggaatcctacaaacagaaggcagaaaaatctgccatggattatggatttcatatggccattacaaagtggaatgatgatgtttcgagggaaatggaaacgatggttaaggaacatgggatcaattctttcaagttcttcatggcgtataaaggttcattgatggtcacggatgacctactcctgcaaggcttacagaaatgcaaatctcttggtgccttggctatggttcatgcagagaatggggatgctgttgctgagggacagcaacgaatgatcgatcttgggataactggcccagaaggacatgctctctcaagacctccagttttggaaggggaagcaactgctcgggcaattcgattagccaagtttgtcaatacaccattgtatgttgttcatgtgatgagcattgatgcaatggatgagattgccaaggctaaaagagaagggcagagagtcattggtgaacctgtggtttctgggctagtacttgatgattcttggctttgggatccggacttcatgatagcttcaaagtatgtaatgagtcctcctatccgagaagcaggacataataaagcacttcaagttgctctttcatcaggaattttacagcttgtaggaactgatcattgcaccttcaactccacacagaaagctttcggctctgatgatttcagaaagattcctaatggtgttaatggtatcgaggaaaggatgcatattatttgggacagtatggtggagactggccgaatttctgtcagtgattatgtgagagtgacaagcacagaatgtgccaagattttcaacatataccctcggaaaggagcaattctggaaggatctgatgcagatattatcatcctgaatcccgagaggagctttgtcatgggtgcccacacacaccattcaaggtccaacacaaatgtgtacgagggcaggaaaggaaagggaatggtagaagtcacgatctcaagagggcgagttgtgtgggaggatggcattctgaacgttgttcccggttcaggaagatacgtcagaacaccgccttacagctacctgtttgatggcattgaaaagtcagacgctgcctacagagcctcccttcgtgcccctgtgaaacgtggcaaggctgctgcttaa</cdnaseq>

Protein Sequence

<aaseq>MAMPCRLHGDILLLLLGAVAVAVAHPAANEFCAAVGGGSGGCGV GGGGGGDGRRILIRGGTVVNAHRVEEADVYVEDGVIVAVRPNIPVGDDHVKVIDATGK YVMPGGIDPHTHLEMEFMGTVTIDDFFSGHAAALAGGTTMHIDFVIPVNGNLTAGLES YKQKAEKSAMDYGFHMAITKWNDDVSREMETMVKEHGINSFKFFMAYKGSLMVTDDLL LQGLQKCKSLGALAMVHAENGDAVAEGQQRMIDLGITGPEGHALSRPPVLEGEATARA IRLAKFVNTPLYVVHVMSIDAMDEIAKAKREGQRVIGEPVVSGLVLDDSWLWDPDFMI ASKYVMSPPIREAGHNKALQVALSSGILQLVGTDHCTFNSTQKAFGSDDFRKIPNGVN GIEERMHIIWDSMVETGRISVSDYVRVTSTECAKIFNIYPRKGAILEGSDADIIILNP ERSFVMGAHTHHSRSNTNVYEGRKGKGMVEVTISRGRVVWEDGILNVVPGSGRYVRTP PYSYLFDGIEKSDAAYRASLRAPVKRGKAAA</aaseq>

Gene Sequence

<dnaseqindica>6318..6407#6501..6674#7359..7413#7501..7770#7972..8183#8367..8487#8765..8852#8925..9003#9183..9270#9403..9443#9568..9620#9714..9870#9953..10144#agtctcagagtcagaggcaagagaaccgcaaaacacaggacgcgctccgctcctctgccgccgccgccggagctctcacctccaggggctctcgccacgagccgccggagctcaacccgtgccgccgcacgggcgccggcggacggctggaggccgctgctgcatccttctaccgcccgcattgcttttgctccctcctcctcggctcctccctgtccaaacaccggcaggtgagtaccctaacctaaatccctgcaccccgtccaaaagtgtagtgtgatatctcttcgtgttcatgtgagtgggaaattggatgatgctattggagtgaattaatcacaatgtatagtactagcctactagggacgatgccattatggttaaattggggatatattttgataggtttatatggagaacaatggatgcacccatgcttataaagggattgagatgattaaggagatgggactacatgatactaactacagtcgtagttcttagggtaaacacactttattagacttgaaaaatgactcccaattggccaacctcattttagcaaagaaaatgtagagcataaagattattgcatcaaatcgttgcctcaattaaggccatatatgttgttccaagctgataagttaaaggaagggataatcgcagcatcaagatcacttacagaaaaggtattaccttctatatctgctcaggcacaatgacatccccgtcaatctctatatctctgatgtgagctatctttgcatgatactccccaccttcttggcattgttgcttaatttgtggacatcccttgatgtaaagctcgttgagccccatcggcaggccttcttttggcaagctttcaaccccgggacagttactaatccgtagtgtttcaagtgaggagatgttgtgcagaccaggaggtaagcattgaagatcatcacagcatgatatctccaaaaattgaagtgtgtgaggtaaaccctctgctggaaagttattgatatcaggacaatcagcaatttcaaaatgccttagatgaggaaggtaacttaggccatttagaagcacacttgctaatggagtgcatgagtttagacggatatcttcgattgaagtgggaagcaagcctccctccagtgctgtccaaggcaccagacaagggcactcgtagatgtgcaggcttctgagtgatattaatggacggaaacactcctctggcagtgaaacaagcccttcacaatgggctattgttagacttttgagagctgttggtctgtatgcaagtaaacctacacgtagagatgttagatttgggcaatcattgatgtatagagatgttggtgaagatggacaagaattattctgaagctctggaagtgactcaagccctgattcagaaatccacagtgttcttagtgttgatggaataggaggtaacttcttcaactgtgggcacttgatgagaccaagttcagttaattgtggaaacaattgatcagcaacatcaaaaatccactcgctcagatttggcatatcttccaatagaagatcttctaaagctggaaaaccttttggttgtccaaatcctgtgaactcactgctgagttgtgtcacctcagttactccagctatgacaagatattttaaaaagggaagctggcctaaagctggaagccttgtgcttctacagttgcatatatgtatggtttgcagcttgggaagaaatgaactagccagccagcttgggaacctcaccccagggaaccctttaatcactaattccttgagatcgagatgtggttgaagaccttctagaacttcttgctgctctgaaggattgctttcacagtcctcatcccatataaggtgtagagttcgaagatgctctttgtttctcaactttgcacaaactgcatcttgcccattaggtacattattgaggccacgaatagaaagttgtccttgcagctcatccatgttatttagttctgtgacgttgtgccctgagcgcttctgaactacaaattcttctagttcctgtaggcataccaaacttccaattccatgtatcctggacagtagtcttgtacttgcttctaagtggcgcagattaatgagcctagtgatgccttgtggcacttcccttagaaaattgcagtcactcagctttagtatttgcaagttatagagcttaacaagagatgctggtaatgtttcgatttcagtgctactgagatctaggaagcgcagttgtttcagattccctatagattctggtaactctttaaggccttgtccatgcatatcaagcactctaagatattcaagtttcataaatagaccatgaggcaattgagacatccttgacttgtatccatggataatagtcagtgtccttagcttcctaaacccatacagtggattgaagtgcatgcacttggcatccttgcatggaaatgaaagatgacgggtcttaatggcattgtcatgtcttctcccataatctaagtggtcgcagtcttccatggagatagattttgcaaggtcgtgcattgcatcatgcatcacatagttattctcatatggctggaagaaagacctgcttaataactcattaaagtatgcatttccagtatcttccattctcttctttctagactgtctgatgaaaccaagtgctagccagatcttaaccagtttctctctcctgaacatataatccttaggatatacagaacagaatgcaaagcactgcttaagatgtggtggtaaatggttgtaacttagacgtagggctggcaggatgttattcttatctgccggtaactcccatatgtcattttgcagtatgtccttccactcctcttcatctgttttgcaaaacaggaggctccctaatgcctttgatgcaagaggcaatcccttcagcttcttcacaatttccattcctatcgcctccaactccggatgtgcgctgcagtcaccatccctaaatgcatggctcttgaatacagaccagctgtcatcatctgatagtttctgtaacttgtagggctctattcctcccatgattctgccaacattctcatttcgtgatgtcaccactatcttgcttccaaaccctcctgaaattaaggctgctctatagctgtgccatttatcaaggtcttcattccagacatcatccaagacaagcaagtacctcttgccccgcaatactctggagagtgtttcctgtagcatattcatgttagtactagcaacagattggtcatagtcagaagcctcaagagtttcttgtgttagctttctctcatcaaaactttcagacacatagatccagatcctcaagtcaaagtgttctcttactctgtcatcatggtacaccatctgcataagagtagttttaccaagcccacccatgccaacaactggaatgacacataagttgcaggaattatgtccattatcagagagcaccagcctcaccatttcttctctgtccctctccctaccaaatacagccgaactatctacaagagaacttgattgcggacgctctgaggtatcataccgtctcatttcacatatcatctggagcccaatggtgtcgcgttcttgcgcaatcttatctaatctctccaatatgatgttaatcttatgctttatcctatgctggtacagattcctactcaagaaggaggaagaaagaaaacttgcctttgtggggaatatcacctgcctctgcttcatgcgcatacttttggctgaatagctgtccagcagatcatcaaggtcgtacgcgatatccttgagcttcgctagccatcccctcacagatgcatctgtcaactgcttctcctcagcgtcgtcaaggaaagcctgtaactgagacagtgtggaagagaggctctctagcttgccatgtatgcctctccaagatatgaaatgatcaagggttgcttctgacaatttctggaagagggtttgcatgaaggctcctaaaattgcttctgctgccatggcagttttttttttttgtctgtgtgttcccctcttttgcccttttagcctgtaagaagtagaagtgaagaaagactgaattaacaagggtttgggacgttgacctgtaaggtggtgtttttccacgcaatttcagacacgatatgccccgtaaacaatctctttccatagatcattaatcacttaaaagcttatgtgcgcgttggaactttttaccccatacaactgtgaagtgatgttgatattgtattgttcctttctttccactcagttggttgatacttgatacagcgtacaagtccggttcacatggtctttcctgacattatcttataaaaataatctggtctttgcaagcgtgttgaattttgatgactgtacacttcttgtgaagtttgtgatcatgttaaaaagaaggaagtttatacttttgatcgtgcagtccacagcagagttcaaatttcggtctttttttgtgaatttggtaacattttgttcaaatttgaccaacatttgtttaaaattttggaaattttagaccgaaatttctaaagtcggaaattttgatatatcggtggcctctgatagaatcggccaaaccgaaaaattaaaccctgatccataatcacttggtgtatgggccgggggatttgcaattatgacactgcaaacattaacttttgctataatgacactggacccacatttcatagacacaaatggacctatttgtcatccactcggagtgtcaaaacagcggagcccccatgtttgcagtcccaatattgcaattttctcgtctggcccgtgggaatcaaaacaaaaaagagttagttcggagtacaagacaattctttaaaatctggaggagagttttcttgactcgggagtcggggacactcttgtctagacagtcggcttctagtggtggttgatgtagctaacttttggtcatatgttcatacctattagacttacagtgttaatacctgttcattaaaatttctttggaaataaaaatgtgtgatactattgaggaacttatatcacttcaattaagaacaaataaggatccaaactttggtatggccttccgccagctgagcttcgcttagcttaactccttttctttcaagatggcactgaagaaaaagtgacaaacatgtggttaatcctataattcgagaaaggggaaactacaccatgctgttcagcaaaatgcatcacctgaagctttagggttagtgagacagacataagcccaattcatacagatataatgggggtcaagtacaaaccttgcctttgcattatctaatgcagaaggtatagatcctccgtgcaccttaagtagagatgtgttttcttcaaatagatcagaatatgttctaatgaattggttgccacaatttacataaattcattatgaatacaatgactttggaggctccaaaggttatacagttaataactagtaaatattttgctcatcagtgtttcctcagttttactgggatctcccctgacgtgacaacattagggaatatcattgccatgttctggatcttctcaacactaggatacgaagaaggtcgtcaaggcaacttcgacgaacatagcaggtttagtaaccatgtcagaaaagcattttgcaactacccattattactgtcctgttactgctatactagcttaacgctgctgattctttggctgctggaacagttcaatgtgcaggagcaccatgatctgtttgaaccacggtatattctctctgattccgtcaaagtaaatacgtaggcactgcaattctgatgtgctcatggattcactcacttagcagatctttgcagcaagtgcagccattgtcaaagacaggcagcacgtagttgaagcttgcaggagttttgctctatccaagatgtcacaaacacagcctgagttcttacggcgctggatgacagtgacgttctgaagatggtttgcagatcggatttatagcaagaagattatcggatggatttggtgacgagggcctgcgcgagattccaactaacccaggattttctctgttttttttttctttcgtttttgtttaataataatccgtttaattgatgtgttagtcctccccgcatacgtcgcacgcgctgctgattggataagagaatcgaacgaacgtgacaactggtttagtggttttttttttctctgcttcttctcttctctccgctcttctgcgtctctgaggatccgaggaagtggcggtcggaggaggaggagccatggcgatgccctgccgcctccacggcgacatcctgctgctcctgctcggcgccgtcgccgtcgcggtggctcacccggcggcgaacgaggtggggtgcgctcggatttctctgtcgctcgatcgccagcgtgtttggttggtttggttggtctgatgtgattttgggttttggactctgaagttctgcgcggccgtcggtggaggaagcggtggctgcggcgtcggcggcggcggcggaggggacgggaggaggatcctgatcaggggcgggacggtggtgaacgcgcaccgggtggaggaggccgacgtgtacgtggaggacggcgtgatcgtcgccgtgcggcccaacatcccggtgagtgtggctgctgatctctgagactttgctctggggttggggagattcggattggctcctcttgggattcggactgcgcattgacttgccgtcttcaagactgcaacaaccaatgagccatcagtagaggctagactgtagccatgttcgttgatgccaaattgccaagtgactctggaactggcttatactccctccatctcaaaatataagaacctataaccagataagatatttctatttcctagtagttgaccagattcgtaatactcagaaatatctatatgttcatattcgtgttactaggaaatctctcatccgatttaggttcttatattttgggacggatgtagcatcttaagatgaacagttttgtagtaataggtcactgcaatttactatggtaaatgtaaaagtaactgctatggtaaatgtaaaacaaaggtcatggagatatgaagtgacagtataaacagtaaactggaaaaaatgaacacagttatctttccttctttcttgagatgagtgagaagccatctgaaactagcaattttttttatggaactgtgaattggggtccataaatagagggaagttgtgttggagcagctttttatcaaaccatgtcctctcttaatgtttcaaccttgctattgaaaagtctcatgttttcatatctaggttggtgatgatcatgtaaaagtgattgatgcaactggaaaatatgtcatgccaggtaaattcttacggttttgataaacattttggaattagttattacttgctcttcgggtttatcattcttctggcaaatgtcacacaggtggaattgaccctcacactcacctggagatggaattcatgggaactgtaaccattgatgatttctttagtggtcatgctgcagcattggctggtgggacaacaatgcacattgacttcgtcattccagtgaatggcaatttaactgcaggtttggaatcctacaaacagaaggcagaaaaatctgccatggattatggatttcatatggccattacaaagtggaatgatgatgtttcgagggaaatggaaacgatggttaaggaacatggtcagtacttctttttgtgctgtcagttattttcatcagaaataagaaattccattctggttcatgaagcaactcctatgtttcaacctgaaatcaactttgcaaatttcctgtagtctgcaatgtctatcagaacatgatgctttggtactatattgtatcgtagtctaagtgccagaatttaaattgccaatatttcagggatcaattctttcaagttcttcatggcgtataaaggttcattgatggtcacggatgacctactcctgcaaggcttacagaaatgcaaatctcttggtgccttggctatggttcatgcagagaatggggatgctgttgctgagggacagcaacgaatgatcgatcttgggataactggcccagaaggacatgctctctcaagacctccagttgtaatttcacactaactcttcgcatttactgttatgcctatttatcttgatatgttggacagatcaagtgttttcttatacaatattcaagtcaatttggtgaactagacacaccatgaaatttgtgtattttctctcacaaggaaggatagataccattgagctgcttcttgttccctgcagttggaaggggaagcaactgctcgggcaattcgattagccaagtttgtcaatacaccattgtatgttgttcatgtgatgagcattgatgcaatggatgagattgccaaggctaaaagagaaggtctgccaccttacctttcagttgcaatcaaattactcatgcatgcaagcaagccagagtttttatatgaatgaatatgttcctagaaagatacattgtatatgttcatttgcacttttaagtagtctggtttcaaataacaagctggcctgggtcctgggaactgaaaagtcgcattggattgatcatgccccagatatctacattgatataaatttggcaagatatctcaatttgacaaacaaagcatatattgatacaaattcatactttgcagggcagagagtcattggtgaacctgtggtttctgggctagtacttgatgattcttggctttgggatccggacttcatgatagcttcaaagtaaataaaagcacaaatttaatgctttgtttatgcaattgtggtttcttttatctcatatcacatttctaggtatgtaatgagtcctcctatccgagaagcaggacataataaagcacttcaagttgctctttcatcaggaattttacaggtgatacttttcataccctcagtttgacatcacggagttactttttcatcttagctaatatttggaggtcagttagcaaattataggggcgcactgtttgcttgcagaaacttataccttgctaaggggtagaaaacttcacatggatgactatctaactgctcttcatttctatgcagcttgtaggaactgatcattgcaccttcaactccacacagaaagctttcggctctgatgatttcagaaagattcctaatggtgttaatggtaatccttgtgggttgtgaatttcaacgttgacaaataagtatataaaagaacttttgattttataaggaattcgtgtttggtttgaataaacccagctaaggcatctctctcttaaacgcttgaccccaggtatcgaggaaaggatgcatattatttgggacagtatggtggtaagttgatattttgaatggtgtttttaatggaaaatattctacagtatcaaaaaaaaagtcagcaatccagtggttccatttccagtatatctcttatctgacattcatacaatgtatgcaggagactggccgaatttctgtcagtgattatgtgagagtgacaagcacagaatggtatattgaagaaattcactagctatcattttaaacaacaaattccccactattcaacgaagtacaatgatcaaattactcaaatcttttcagtgccaagattttcaacatataccctcggaaaggagcaattctggaaggatctgatgcagatattatcatcctgaatcccgagaggagctttgtcatgggtgcccacacacaccattcaaggtccaacacaaatgtgtacgagggcaggaaaggaaaggtcggtccctcgttactcacaactgcatttgcaaaagcttgaattcaacttatgttttctttttctctctcaatcggtgtagggaatggtagaagtcacgatctcaagagggcgagttgtgtgggaggatggcattctgaacgttgttcccggttcaggaagatacgtcagaacaccgccttacagctacctgtttgatggcattgaaaagtcagacgctgcctacagagcctcccttcgtgcccctgtgaaacgtggcaaggctgctgcttaacgatgcccgctgctgatgaactacagaactagtttctccaaggtgaacgacgtctgctccatgcgtaacttccttgtgtttgtgtatacagatctcattattcatatcattttctgataggtaagaatgtaaaattacctgatactacctccgttttttaatagatg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0807900, RefSeq:Os01g0807900