Difference between revisions of "Os01g0808100"

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(Created page with "{{JaponicaGene| GeneName = Os01g0808100| Description = Similar to Transcription factor HBP-1b(c1) (Fragment)| Version = NM_001185683.1 GI:297720500 GeneID:9266109| Length ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0808100|
 
GeneName = Os01g0808100|

Revision as of 19:00, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0808100

Description

Similar to Transcription factor HBP-1b(c1) (Fragment)

Version

NM_001185683.1 GI:297720500 GeneID:9266109

Length

6774 bp

Definition

Oryza sativa Japonica Group Os01g0808100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:36062389..36069162

Sequence Coding Region

36062677..36062823,36063371..36063619,36064122..36064127

Expression

GEO Profiles:Os01g0808100

Genome Context

<gbrowseImage1> name=NC_008394:36062389..36069162 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:36062389..36069162 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtggttactggcagggcaattagagcctcttacagagcagcagcttgctggcatagccaacctgcaacaatcctcccaacaggctgaagatgctctttctcaagggatggaagcactacaacagtcgcttgcagagaccctggcatcaggatctctcggccctgcaggatcttctggtaatgttgcaaactacatgggacaaatggcaatggctatggggaaacttggtaccctagaaaacttcctacggcaggctgataatctgcggcttcagactcttcagcaaatgcagcgcatattaaccactcgccagtcagcacgagctctacttgcaataagtgactacttctcccggcttcgtgccctgagttctctttggctcgcccgtccaagggaataa</cdnaseq>

Protein Sequence

<aaseq>MWLLAGQLEPLTEQQLAGIANLQQSSQQAEDALSQGMEALQQSL AETLASGSLGPAGSSGNVANYMGQMAMAMGKLGTLENFLRQADNLRLQTLQQMQRILT TRQSARALLAISDYFSRLRALSSLWLARPRE</aaseq>

Gene Sequence

<dnaseqindica>6340..6486#5544..5792#5036..5041#acccaacccaacccaacctcaacctcaacctcaagctctcctcctccttcctcctctgctcctgctcctgctcctgctgctgccgtgtgctctgctggctgctcctgctggtgaggtggtggtctctctccccccacttcaccatctcctcctctccttcgccgccggcgcgcttgcttcctcctcagcacgccacctcctcgcccctcctcatagctcaatcagattactcgaccgtgcaaacatcctgaccattttctacagccccgcgctttagcgttcttgtttttttttttttggctgctgctgatttggtggcggcggctatcttggagagagatacagaatccgtgcttcttcttgagcgagctggttggttggtggcatgaggcgtggagagcttcagagtgagtgccatggcgcgtgttgattgctgttggtggtgagatggagggtggtaggctaggaggagcggcggcttcagcatcggcggcggcggcggcggacgcgcgcggcgggatgtcgggcttcgcggctcctcagcacgccatgtacgcacacctgcctctccatttcttgatggtttctcttctcccattctcctgctcatttctgcatgctctgtgctgtgtctttacttgtcttagcttctttttttttgttatttttctgagtgagtatgatcccctgattgctgattagttttgttaatcgagcatggatcgcggatgattgctcattctgcttttccagggaaaaaaaagttgactgctttttcagctgattagctcttgtcgatgagtggagtggtgccctttagctcaagtattgtaatgattagagagtggagtagctttagtactgctccttagtctaggtttttggttgctgctgttcttgttcttattatgcttgtggagtgcaaagaccttaagtagccatgcggcccatcactgatcactggaccacctatgtactatatatgttctgaaccaggacactggattagcaccactatggtaggccccagatctccaaaaagggtaaacaggatatgctgattgggcttgatcatgcatagtttgggttagctcataatagagtgaagcatggaccagggagtgtgacacattgtggtggaaaatggacttttgctgaactatgccaggtttctgtcataatcttcaaattcttaatcaacagatgttgaagaaccctttttttttgtattgctctgcagtctgaacaaatttgggttcttgactgctactgcatgcaatgggcatgcaagtttgcgaccaatgcaactgaatggtgtgctgttattcttgtatggaaaagaaatgataggttgcaccattgactgttgttgaatggacattgtgtgatgctcataggatgtatttgatatgtaagtttttgctgtgtagattcactattttctgttctgtaactgatctggtgtacaaaacttttcagccatacaaatttgaacaacgtgcaacctactcaagttactgattttggggcacttgcgcagtctgctggattccgaatagaagatctcgctaatctcagtacaagtatgttggcaatcaaatatgctagagaattccttttttccatatgttgttttcttgctttataaatttcaactgtgtcatttctacttttctgcaatggagttttcaccatacattgcacacagctacaatgctgtaccattaatgtcaataaaaatcccctataccttttctgtcgactgcctgtggcttgaacacttttgctttatttttcttatttccagatggtttgttcaatctgaagtcaaatgctcataccattatcaatgaccccctccaatttgagaattatgtaaaggtatgcaggccatgaacggataattcctcatgacagatctgatggtcttttataaagtaaaattccacccacaccaggaattcatgcagttttccctcctggttgcagtctatttctccgtctaatattactacaacagcaacagtaacagtagttgaccctcagacactggtcccacaaaagggagcacaactgaatttggtaactataaggactggtaacgttgagaattggggggagtcgactattgctgatacaagtccaaggactgatacatcaacagatccagacactgatgagaggaatcagatggtaataagacgcctatcattttgaaattactgtttatcatgatgatatgaatttgtttaaaactgttcataccaggtttgggatgtttgaattttctttcaaatacctttgtaaagaattgcctgaatttgtgataggtacagcctttataattctactattatatgcatgtggcgattgattttttatgtgttaaggactgatggttcataacttcatatgtgccattgagttcagattagctgatgaaacaattcagtgtagcactacttgtagattttgccttccctagactaatccttgcatgctgcctataacattcttggagcatgtggaagctttagtatatgtacattgatcctcaatcatgtaaataattgaattttcccattaacacaaccacttcaattattttgtattattttcactttatttatgcttttttggggttgaatgctaaatttatactcaatcatatcgatttattggctatatatacttaacagtttgaacaaggacagttagctgctcccactgcttctgattctagtgacaggtcaaaggacaaactagatcataaggtatgcgctgtatcaccacatacaatatgctttgatcatacatgcaatccaccattcaaagtaaatgactctttctcaacagacacttcgccgccttgcccaaaatcgtgaagctgctaggaaaagccgtttaagaaagaaggtgtgtttgtaactttgtatgatcttgaaatgttttatctgatattgttgttgaatttgaacttctactgagctacatatatattttctttcatcatctcctgtctaacaagctactttctttaagtagtgtgttacggattatttttaccctgaaattccattagtagcctataaacttgtcctaaaccatgatagtatttgcaattgtagattagataagcatttttttttaaaaaaaattagccctttttcttcagtttgtgctcttttggatgctttgtatggtttcatcatttattttctgcaggcatatatccaaaaccttgagagtagcagattgaaacttactcagatagagcaagagcttcagcgggctcgtcaacaggtagaagctcaatatttttcttgcaggatttatcagaagtttcaagagataaacatgtattcggtttaattgtccaacatgtgcttcagggcatttttatatcaacatcgagtgatcagtcccactcagcgagtggaaatggtaatagtgtactgacttttctctttttctagaattgttggttaatataagcagtgctgtctgttgtattttatcatgtgtcttttaatcatcatttttcttcggtattacttgggataaaggagacaaataaagagagaagaagatagacacgaacatgaccaactatgactagctatcacgatacactactttatacttaagagtcttgtgcaagaaaaaaaaacttctttaggtataataacaaattgtagatatcatggtagctagtttcagttgctcattgttaagtatccaatatactgccaatgcctttttatggtaatgtactgatgttttctaatctgtaggagctttggcatttgacatggagtatgcacggtggttggaggagcataacaaacatataaatgagttgagggctgcagttaatgcacacgctggtgataatgatctcaaaagtacagttgatagtattatggcacactacaatgaaattttcaagctcaagggtgtggcagccaaagcagacgtttttcatgtgctgtcgggaatgtggaaaacccctgctgagaggtgcttcatgtggctaggtggcttccgatcatctgagcttcttaaggtaagaatatactattattatattgcgcctacttattttgaagcctcacccggaggcaaaatgctgacctgaatatatattattttaattgatccaatatttttcttaggctctgttttttttgaaaggaatactaccaggcaatggcccagtagtgtattttatagaagccaacaaagtttttacagggaaaaaaagaaaaaatacaaaaggctacaaccccctatagaagctataaagtttgtaaccaattagaaaccaattgtctaagatcatcattcatcctacacatatgtagaagaatttcatgcttaaaagaattccaccagctgtcaaatgaaggatctatattctggaaaatctttccattcctttgcttccaaatgtgccaacacgcaatgaaataaatctccaagaatccttttttctgaaatctcaatcttgctagcaccagcatccttttttctgaaagaattctagagaagtgttccaagatattcccagcttctgccaacattttctactaaaagggcattgaaagaacaggtgagacaaagtttctctgtcatgcaaagggcataagacacaagtaagatcagcatttaggggggcgtattttctcctgtccaacatgtctctcgtgttcagcctatcagagaaaagaagccatatgaaaacttttatcttcatcacacatttgctcttccagatccatcggaaaggtctgggaggttgcgtggatgcaaaattcaacttgtaaaaagcttttgaggtgtaattgttcctgccccatataaaactccaattatccccctgctgacttgctaaggacagagcatccagctctccctttagcagcagaaattctgtgtaagcttcctgggtcagtggcaacttaaaacaatcctcaaaaggtttagcacaggtgacagccaaggaatcatttctggcaatggcatggccacatagatgtgggtaagtgatgctcctaatttggtcattccacatgtcgtcccaaaacaaaactgtgttacctgagataacctcacactttgcaattcccctgaagtaatctgaaagagaattttttaagagaattcccctgaagtaaactgtgttacctgagatagcctcaaaactgtcttaggctctgtttggaataagagaatttttctcgctcaatttctgtgtgaaatgaactatttcttgtgaaatttgttgcactcgaaacaggtcctttttgtctttgtgattaaataattgccttcatgacttttgaccgacttgaaagctagaaaagctcacgatctacatttctaattagatattatattgttttgctttgctttcccttttcttttataaaaaaatagtcttttgtggaattcaccaatctagttatccctatccacacagttcgtaacaaattcaagatgactgacatctagttccttttataccaacatttctgctgcagttactggcagggcaattagagcctcttacagagcagcagcttgctggcatagccaacctgcaacaatcctcccaacaggctgaagatgctctttctcaagggatggaagcactacaacagtcgcttgcagagaccctggcatcaggatctctcggccctgcaggatcttctggtaatgttgcaaactacatgggacaaatggcaatggctatggggaaacttggtaccctagaaaacttcctacggcaggtaacttgtatttgcttacctcctattttataacctggtttgtttgttcaatattgttcgagttggtttgtgcaatctatttggctcatgcattgtacttggacaactaacgtggcaccttttctgtactcaatagactgttctagctggtgctaatgcacataattaaatgggttaattagatccatgcctttgcaaatatgggttaaaagtgagattgcaacctctctctcatcactaattatattggctcattgtctaaaaattaattaattattccctctgtcccagaacatgatcattttcagcccctcccatttgtcccaaaacaagtttatttttaagcaatcattgcattgaaatttgtcaaagtaggggataaatacattgggaatagataaaaagataaatagacatgtttctgtgttgactaatacagaagggaaaataaccattaaacggaataccaagaaatagacatagagaaatgtatatttctgttgcaaattgtaacttttggtgaactataacgatgccttatctgcaggctgataatctgcggcttcagactcttcagcaaatgcagcgcatattaaccactcgccagtcagcacgagctctacttgcaataagtgactacttctcccggcttcgtgccctgagttctctttggctcgcccgtccaagggaataaataaattgaattgattcgtaagtaggatattgttaggtaatgtatctctagtgttatatcagataggaattgaggtattccctacttcctagattcttcacaatgttcatgtattggtgacagactcggatcactatctttccatgtatgtcttcaagtgaatgttcaatgcatattgtagtctgtatatgacatcatatgatgagttgttgggcaaatttgtaacatttttgagaaaagtggggatgtaaatacttgcagaataattttagagcttatccagtgatt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0808100, RefSeq:Os01g0808100