Difference between revisions of "Os01g0810600"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os01g0810600| Description = Protein kinase-like domain containing protein| Version = NM_001051120.2 GI:297597822 GeneID:4327353| Length = 5305 b...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0810600|
 
GeneName = Os01g0810600|

Revision as of 19:00, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0810600

Description

Protein kinase-like domain containing protein

Version

NM_001051120.2 GI:297597822 GeneID:4327353

Length

5305 bp

Definition

Oryza sativa Japonica Group Os01g0810600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:36194920..36200224

Sequence Coding Region

36194920..36195394,36195514..36195700,36196058..36196187,36196382..36196713,36197154..36197638
,36197773..36198340,36199167..36199228,36200157..36200224

Expression

GEO Profiles:Os01g0810600

Genome Context

<gbrowseImage1> name=NC_008394:36194920..36200224 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:36194920..36200224 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctattagccttccatctgtttttggctgcctcaatgattcaggtccatgcccagcctcccgctgtccatcagttttaggcagttttcacctgggagatggaaaggtgaaccctgagccccacaataggtttttaagcatcgactgcggatatacagatagtgctggctatgacgacaagaacacaatgttgccatatgtctctgacaaaggatatataaagggcggcaagaccttcagtattctgtcacagtacatgaaagaagctgcaaataagcaagaagaaaccctgagaagtttccctgatggccaacggaactgttatacattaccaaccaaccgtagcaagaagtatctcatcagagccaccttcacttacgggaactacgatggccgcaactcatcagagagtggttcaccgtttctctttggactccatatcggcatcaacttctggacaatggtgaacctgacaaaattgccttcatcgaacacaatctggaaagagctgatcatggttgctccaggcaattccgtatctgtttgtctgataaacaacgaattggggactcccttcatatcgacattggatttgaggcccttgcaagatacaatgtacccctttgtgaatgtttctgtggccgtcagttatttttctcggcaaagatatggacaagtcaatgatgtcatcactagatatccagaggatgtttacgaccggttttgggagggagcgttccacaccagatcctatccctggatcaaccttaacacaacacaagaagtgaaaaggctcccaggtgatgaaaagttcatggtgccgaataccatcctccagaaagcttcaaccataaacatcacattcagttggctcaacatcactgtgaggggcgccaacaacctgcttggcttgggggatctggagctgctaccggtctttcactttgctgagatagccagcaacacgaccaggttgttcgatatctacagcgacagcgaggagctgttcgccaacttctcaccatcccccttccaggtggacagcatgtaccagaatggccggttcttgcccggtgtgagctcaactttcacgttgcgcaagcagcccacatcacagccaccgctcatcaacgcgttcgaggtgtattcacttgtccggatagctactgcttctgatgatggtgaacaaaacagtgggttaaattcagatattttcgtgtatacactatacagtagagcaaagtggattgagccatttgtgaattgtgacttagcaggaaaatcaaaagaacatgatgattatgatatgtatgaagaggatactcccctgcatactgacaccagaagattcacatatacagagttgaagactataactaacaacttccagtctatcattggaaaaggaggatttggtatggtttatcatggcatattggacaatggagaggaagtggcagtcaaggtgcttcgggagacatctataacactatcaaaggacttcctccctgaggtgcaaatattgtcaaaagttcaacacaagaatctcgtcacgtttttaggatattgccacaacaagaaatgccttgcccttgtgtacgatttcatggctagaggaaacctacaagaagttttaagaggaggactggagtatctgcatgaatcatgcaccccgccaatagttcacagagatgtgaaaactgcaaacattctcctggataagaatcttgtggccatgatatctgactttggtctttcacgatcttacactccagcgcacacacacatatcaactgttgctgccggtactgttggctaccttgaccctgagtaccatgctactttccacctcactgtgaaagcagatgtctacagcttcggcattgtcctcttggagatcattactggccaaccttcagtgttagtggactcagaaccagtgcacctaccaaactgggtgcgccaaaagattgctgaagggagcattcatgatgctgtagacagtagactaaggcatcagtatgatgccacttccatacagagtgtcatagatcttgccatgagctgtgtggaaaacacatccactgataggccaagcatgactgacattgttatcaagctcaaagaatgcctaccggcaggtacaggtgaaatgcaactggtgtctaggtcctataaacagaaggaagccatggacgctgacatagcgaggcaattccagctgctgatttctggagtttcaatagaaagcattgagggcaactcaagtgggaccacagaattaagatatccttcgggaaggtga</cdnaseq>

Protein Sequence

<aaseq>MAISLPSVFGCLNDSGPCPASRCPSVLGSFHLGDGKVNPEPHNR FLSIDCGYTDSAGYDDKNTMLPYVSDKGYIKGGKTFSILSQYMKEAANKQEETLRSFP DGQRNCYTLPTNRSKKYLIRATFTYGNYDGRNSSESGSPFLFGLHIGINFWTMVNLTK LPSSNTIWKELIMVAPGNSVSVCLINNELGTPFISTLDLRPLQDTMYPFVNVSVAVSY FSRQRYGQVNDVITRYPEDVYDRFWEGAFHTRSYPWINLNTTQEVKRLPGDEKFMVPN TILQKASTINITFSWLNITVRGANNLLGLGDLELLPVFHFAEIASNTTRLFDIYSDSE ELFANFSPSPFQVDSMYQNGRFLPGVSSTFTLRKQPTSQPPLINAFEVYSLVRIATAS DDGEQNSGLNSDIFVYTLYSRAKWIEPFVNCDLAGKSKEHDDYDMYEEDTPLHTDTRR FTYTELKTITNNFQSIIGKGGFGMVYHGILDNGEEVAVKVLRETSITLSKDFLPEVQI LSKVQHKNLVTFLGYCHNKKCLALVYDFMARGNLQEVLRGGLEYLHESCTPPIVHRDV KTANILLDKNLVAMISDFGLSRSYTPAHTHISTVAAGTVGYLDPEYHATFHLTVKADV YSFGIVLLEIITGQPSVLVDSEPVHLPNWVRQKIAEGSIHDAVDSRLRHQYDATSIQS VIDLAMSCVENTSTDRPSMTDIVIKLKECLPAGTGEMQLVSRSYKQKEAMDADIARQF QLLISGVSIESIEGNSSGTTELRYPSGR</aaseq>

Gene Sequence

<dnaseqindica>4831..5305#4525..4711#4038..4167#3512..3843#2587..3071#1885..2452#997..1058#1..68#atggctattagccttccatctgtttttggctgcctcaatgattcaggtccatgcccagcctcccgctggtaagctcatgtcgcagtttcatcagttctattttggacacatcctttgctttcttgtcctgttacattctttccatagtgaacggttgtttgttgaaattgctagcaagttatttgttccaaacaaactaagttagatattgagaaactatattatactccctccgtctcaaaatataaacatttttagcatagtgacaagtcaaccatttttaacttttactattaataaaaaaataaaaaagatcaatcatgtaaaattgacgtttctagatttatcattaatcaaacaatcataatatgcaattttttttatttaaattattatatttttatagatattgttggtcaaaatagcatctcgaagattgtgttgagatccaaaaatacttatattttgtgacagatggagtatatctcaaaataattccttacaaaaatccacgtgaaaaattttagaatgtgatagttgagtcgcagactcgcaggtgctttacttaacccaccaagttaatattgacacctaaaactgctatgaacttaagtattcccccgtccatataaacatacatctgtacagattcgtaatactagaatatgttagatctggtcttagattcattttttatgagacggagaaagtatgtgtttttaatagaaatttagtgagttttcctttaagcatactaggagagtaggctttaagcttactaggagagtatggtcttttttttaatgatattatatataggttttttttgcgcatatgcatgtactctcttcgtcccataaaaaaatgaatttaggttgatactaggatgtgtcacatcggtacagattgatttttagtgacagagggagtagctcttttattaattgcaaaaaatcttcttgtgctaatttcattatgattgtcggtttgtgatagtccatcagttttaggcagttttcacctgggagatggaaaggtgaaccctgagccccacaatagtgaggcttctcttctctagtgttatgctcatgtaagtccaatcgattggagctcctctaatatcatgctcgtgaaagtctaatcgattggttgagctccagggatgattaaccaaagaaaaccaaaatagcccattttaatttccgatcactttaaccctaaacattttttttcttattttacctttaaactatttgaaatggttcactttacttaacaatatttctgatctttgttcctctttaagctgaaaatttttagagccatagataacactattattagagttccaaaatacttttaatttctttcatggctatttacttggaattaaaaccttgatgtataaatcaatcttagtgattctagcctctataaacagtgataaaagaaattgtaaaaaatattgagaggtaaattataatgcatctatcagtcctactgaatttcaatgcaaaatgcatcttatacaaagagtaaaaaataaaaagaacagagaaatatcatttaaggtgaactatttttaatagatttgggtgtaaaatgagctgaaaaatcatttaggagattaagcgatgcgatgaaataattcagggagtaaaatgttgcattccagaaatcctgacaccaccactccaccagctcgaaggggaaaaaaaactcgcagcctcgcgtcgcagggctgcacagctttcttctcacagacacagttactagtaacccgcagtaggaacaccagctttgaatctaaaaaacttccatccaattatcagaaaaacaacggaagcagcaaacggagctctcttaaagtgtttttatatgcagggtttttaagcatcgactgcggatatacagatagtgctggctatgacgacaagaacacaatgttgccatatgtctctgacaaaggatatataaagggcggcaagaccttcagtattctgtcacagtacatgaaagaagctgcaaataagcaagaagaaaccctgagaagtttccctgatggccaacggaactgttatacattaccaaccaaccgtagcaagaagtatctcatcagagccaccttcacttacgggaactacgatggccgcaactcatcagagagtggttcaccgtttctctttggactccatatcggcatcaacttctggacaatggtgaacctgacaaaattgccttcatcgaacacaatctggaaagagctgatcatggttgctccaggcaattccgtatctgtttgtctgataaacaacgaattggggactcccttcatatcgacattggatttgaggcccttgcaagatacaatgtacccctttgtgaatgtttctgtggccgtcagttatttttctcggcaaagatatggacaagtcaatgatgtcatcactaggtgagatcatatcagcatgttgaaatctgttgcagccttagattggtatcaccagggacagtatgacctatatatatgccatgtaatttaaccgtggaatattgtttctgctttcttgtcattcatgcatgcagatatccagaggatgtttacgaccggttttgggagggagcgttccacaccagatcctatccctggatcaaccttaacacaacacaagaagtgaaaaggctcccaggtgatgaaaagttcatggtgccgaataccatcctccagaaagcttcaaccataaacatcacattcagttggctcaacatcactgtgaggggcgccaacaacctgcttggcttgggggatctggagctgctaccggtctttcactttgctgagatagccagcaacacgaccaggttgttcgatatctacagcgacagcgaggagctgttcgccaacttctcaccatcccccttccaggtggacagcatgtaccagaatggccggttcttgcccggtgtgagctcaactttcacgttgcgcaagcagcccacatcacagccaccgctcatcaacgcgttcgaggtgtattcacttgtccggatagctactgcttctgatgatggtatgatcagcaatatattgcaagagcacactacacattcatcatgtatgcagcaggttcataggatctgtgtagcagcatctcagcattagtccacaatataactcatgagctttatgcaaactagaagaatgaattcgtattaagttaaaggcagcattaacatatcaaaaattacttcgcagctttgtaatttactgtctccatcttatttatagtaaacatataagattgcagtgtaaacaaatatatcatctccttattcctttatgctcttcatgttttttttttcaatcccatgtgctcaaatataattgaaagcgactgtaccacaccagcagataaggcgaggaagaatacagcaacattgctcattgcagtgatagttcctgttgtagctatcatacttatgttaattctatggatgctctgctgtaaaggtgaacaaaacagtgggttaaattcagatattttcgtgtatacactatacagtagagcaaagtggattgagccatttgtgaattgtgacttagcaggaaaatcaaaagaacatgatgattatgatatgtatgaagaggatactcccctgcatactgacaccagaagattcacatatacagagttgaagactataactaacaacttccagtctatcattggaaaaggaggatttggtatggtttatcatggcatattggacaatggagaggaagtggcagtcaaggtgcttcgggagacatctataacactatcaaaggacttcctccctgaggtgaactatcaaactacttaagtcggatcatttccctctagaatgtaaagatgttatgtgcagtcttgaataaaaatcaagatgctagatgcctgtgatatctagaagtcatagttccacacatcttttggatgtccactatttttattgcttccaatgaaagcctgtttgtatgacatctgctgctatttcaggtgcaaatattgtcaaaagttcaacacaagaatctcgtcacgtttttaggatattgccacaacaagaaatgccttgcccttgtgtacgatttcatggctagaggaaacctacaagaagttttaagaggaggtttgcattaattacaataaatttaatgttgctcaccctacatgactcaaaattctaaagatagtacttatacgcaaggagtaaacgccttgatctctgcaacctatggcgacgcaacagcgacaccatagtgatgccttaacaaccatgtatattgcccatacatgtaacatgcccaatattactaatgagtgtcaatttgttgcactttgaaacaggacaagaatacagtttgagctgggaagagcgacttcacattgcacttgatgcagcacaaggtccacttcaatcttgtacctcttttaaaaactaaacagagtagatgttgacaaacatatgaaccttgatgagctgcaggactggagtatctgcatgaatcatgcaccccgccaatagttcacagagatgtgaaaactgcaaacattctcctggataagaatcttgtggccatgatatctgactttggtctttcacgatcttacactccagcgcacacacacatatcaactgttgctgccggtactgttggctaccttgaccctgagtgagttatccttcactgaccgatattagttcaatacacttcttctctagttcgagtcaagcgagaaatgcagattaaagagaagcgtattttgtgctgttcttacatctcattctcaggtaccatgctactttccacctcactgtgaaagcagatgtctacagcttcggcattgtcctcttggagatcattactggccaaccttcagtgttagtggactcagaaccagtgcacctaccaaactgggtgcgccaaaagattgctgaagggagcattcatgatgctgtagacagtagactaaggcatcagtatgatgccacttccatacagagtgtcatagatcttgccatgagctgtgtggaaaacacatccactgataggccaagcatgactgacattgttatcaagctcaaagaatgcctaccggcaggtacaggtgaaatgcaactggtgtctaggtcctataaacagaaggaagccatggacgctgacatagcgaggcaattccagctgctgatttctggagtttcaatagaaagcattgagggcaactcaagtgggaccacagaattaagatatccttcgggaaggtga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0810600, RefSeq:Os01g0810600