Difference between revisions of "Os01g0830100"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os01g0830100| Description = Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region domain containing protein| Version = NM_001051229.1...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0830100|
 
GeneName = Os01g0830100|

Revision as of 19:01, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0830100

Description

Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region domain containing protein

Version

NM_001051229.1 GI:115440828 GeneID:4327426

Length

3945 bp

Definition

Oryza sativa Japonica Group Os01g0830100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37264716..37268660

Sequence Coding Region

37264898..37265341,37266049..37266265,37266611..37266771,37266850..37266915,37267062..37267225
,37267502..37267616,37268373..37268576

Expression

GEO Profiles:Os01g0830100

Genome Context

<gbrowseImage1> name=NC_008394:37264716..37268660 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:37264716..37268660 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgtcgtccttgctccggtcgctctcccgcatctcgcgccgcggctgcgtgggaggcgcggggccgagcccgttccaccacagccgcctcccgtactcgccgttctccaccgcggcggcggatgcggtggagaggagggggttcgcggggctggggccgacggcgaagggggagaaggcgcgggtggtggtgctggggaccgggtgggcggggtcgcggctgatgaaggacatcgacacgaccgggtacgaggtggtgtgcgtctccccgcgcaaccacatggtgttcacgccgctcctcgcctccacctgcgtcggcacgctcgagttccgctccgtcgccgagcctctcgcgcgcatccagcccgccgtgtccaagtcccccggctcctacttcctcctcgcccgctgcaccgccgtcgaccccgacgctcacacgattgattgcgagacagttactgaaggtgagaaagataccttgaaaccttggaaattcaaggtagcgtatgataagctggtctttgcgtgtggagctgaggcctcaacttttgggatacgtggtgttactgaccatgcaatatttctccgggaagttcaccatgctcaagaaattcgcagaaagctccttctgaacctgatgctatctgatgtacctggaatatcggaggaagaaaagcgcagacttttgcattgcgttgttgttggaggtggtccaacaggtgtcgaatttagtggtgaacttagtgattttatcatcagagatgttaaacagcgttattcacatgttaaagattatatccatgttaccttgattgaggcaaatgagatattgtcatcttttgatgttcgcctcaggcaatatgctacaaatcaactaactaagtcaggtgttaggcttgtgagaggcattgtgaaggatgtacaacccaacaaattaatcctggacaatggagaagaggttccttatggtttgctggtatggtctactggagttggtccttcatcattcgttaagtcgttgccatttccaaagtcaccaggtggaaggattggggttgatgagtggttacgtgttccttctgcccgggatgtgttcgctattggggattgcagtggatttcttgaaagcacaggcaaggatgttctcccagctttagctcaggttgcagaacgacaaggcaagtatctagctcacctgcttaaccatgtcatgaaagctggaggagggcatgcgaactgtgagatcgacgttgatctaggtcctgcctttgtgtataagcatctggggagcatggcaactgtcggaagatacaaagctctagtcgatctgaggcaaagcaaggctggttactgtttctgtctgtaa</cdnaseq>

Protein Sequence

<aaseq>MAASSLLRSLSRISRRGCVGGAGPSPFHHSRLPYSPFSTAAADA VERRGFAGLGPTAKGEKARVVVLGTGWAGSRLMKDIDTTGYEVVCVSPRNHMVFTPLL ASTCVGTLEFRSVAEPLARIQPAVSKSPGSYFLLARCTAVDPDAHTIDCETVTEGEKD TLKPWKFKVAYDKLVFACGAEASTFGIRGVTDHAIFLREVHHAQEIRRKLLLNLMLSD VPGISEEEKRRLLHCVVVGGGPTGVEFSGELSDFIIRDVKQRYSHVKDYIHVTLIEAN EILSSFDVRLRQYATNQLTKSGVRLVRGIVKDVQPNKLILDNGEEVPYGLLVWSTGVG PSSFVKSLPFPKSPGGRIGVDEWLRVPSARDVFAIGDCSGFLESTGKDVLPALAQVAE RQGKYLAHLLNHVMKAGGGHANCEIDVDLGPAFVYKHLGSMATVGRYKALVDLRQSKA GYCFCL</aaseq>

Gene Sequence

<dnaseqindica>183..626#1334..1550#1896..2056#2135..2200#2347..2510#2787..2901#3658..3861#gggggagcccctcgccgtccagatctcagcctctcggatcggacggagcgtgaggtcgtcgggtcacccaacattttctccacacgcggcgactttctagcaaaaacgcagttcgtttaacgagagtcgctcacttctcgttcaggttcagcaatcgcaatctcgtctcatcgtcgccggccatggcggcgtcgtccttgctccggtcgctctcccgcatctcgcgccgcggctgcgtgggaggcgcggggccgagcccgttccaccacagccgcctcccgtactcgccgttctccaccgcggcggcggatgcggtggagaggagggggttcgcggggctggggccgacggcgaagggggagaaggcgcgggtggtggtgctggggaccgggtgggcggggtcgcggctgatgaaggacatcgacacgaccgggtacgaggtggtgtgcgtctccccgcgcaaccacatggtgttcacgccgctcctcgcctccacctgcgtcggcacgctcgagttccgctccgtcgccgagcctctcgcgcgcatccagcccgccgtgtccaagtcccccggctcctacttcctcctcgcccgctgcaccgccgtcgaccccgacgctcacacggtgagacccccatagcagctctgggttggtgtgtgcggccaaatggccactggttttacagacgtgcctgcgtggggaatgcctgtttccaacattcttggaggagtgatcaaaatgtgggaatgatcgaagctcgatcctttctatttttcctcgtgcagaatcgatacttttgacctttttgaataggggagaggagtgaatcggatttctgggctttgctggaggaatcttgactttactcatctgcatcgtgatccatccacagcatgtgctgcgtgtctcttaagtagttgattgagtagttggtgagctgccttttggtcacatcgaaggagaagaaagttagaccaataataatggggaaaatagctagagaacgctgctgaacttgcgtatattcacgaattcatctatggttcgtcagattctatgtgatactgtatttattgtttagtactccatccggcccaaaatgtagcaacctatctagtagagtactaggttgctatattttaggacgaaatagcttttgcctggaaaagaggcatggtacttcgtgaatattcaccatctagtgcatatttagggtgcagttttcatttaaactttacaaacccactggatggttaatacatgaatttcctataccaatttttctctgaaaagttgtttcacctatttattcatcgtcctttgacctttagattgattgcgagacagttactgaaggtgagaaagataccttgaaaccttggaaattcaaggtagcgtatgataagctggtctttgcgtgtggagctgaggcctcaacttttgggatacgtggtgttactgaccatgcaatatttctccgggaagttcaccatgctcaagaaattcgcagaaagctccttctgaacctgatgctatctgatgtacctggtatgccacagaaacacaaaacaactcaaatcaagatatttgtgttacttaggtaatttgtcacattgacaactatcacacactcacacttcactggcacaaaggaatcagtaattactcgttacttttacattttgtttgtctcttgatgaaatttgcaactacattaacctgggctcttattgctgtttcttgtttttctctgtttgattgagcagaatttagaatagaactattacattttaggtatacttgttttttacaaaataccttgtgtgctgaaatctaattttgtttatatcctccttattataaccaattggccaatgttatttgttaaaacaggaatatcggaggaagaaaagcgcagacttttgcattgcgttgttgttggaggtggtccaacaggtgtcgaatttagtggtgaacttagtgattttatcatcagagatgttaaacagcgttattcacatgttaaagattatatccatgttaccttgattgaggttagagctgttggcatctctccctctctctaaactttgaccacacttaacaaattttgtttcattttattatttcaggcaaatgagatattgtcatcttttgatgttcgcctcaggcaatatgctacaaatcaactaactaaggtatgtaatctctgtctaatctagtgttgtactgttgtgccattttaagccatcatgtaccaagactccaagacctaaaaatatgtgtggatcgtataagaaagctggcagtgaaatactaaaaataacttgtgatcatccaacagtcaggtgttaggcttgtgagaggcattgtgaaggatgtacaacccaacaaattaatcctggacaatggagaagaggttccttatggtttgctggtatggtctactggagttggtccttcatcattcgttaagtcgttgccatttccaaagtcaccaggtggaaggtattgtaaattggcttgaccgtatggagtttcatgtatatgcatcatatactgaatgggatttgattatatgcacctgcgcaccttctgtactttgaggaatagggatatatatatatatcttctacatgtagttcatttgtgaatcaggtttcaccatgcactataagaagcttctactatctataggcttttggtatccacccaattactggtgtaacatggctatctacatctttggtacctgtgatagatttactggttgcctggtcacaggattggggttgatgagtggttacgtgttccttctgcccgggatgtgttcgctattggggattgcagtggatttcttgaaagcacaggcaaggatgttctcccagctttagctcaggtacttatctgaacatcttcctacagtccgagtcaatcacaaagtatttggcaaactaatatttgggcttccttaatcttttctggagtaccaagaacactgggaggaataggaaccagaaaaaaaaaagacaaaagggccttacatcaacattaaacagattcttggccatgacaaacctcatctattgtataagggcctgttcactttgatgccaaaaaaaatcttaccaaattttggcatgatttcttatatagttaccaaaatttggcagcaaactaaatgtagccacttttttggcaactttaccaaaatttggtaaggttgaaaatggcatcaaagtgaacaggccctaatttctgttctttctcatacaaatactttctgttgtttgaagtagatgcactctctcatatgattacttaattcaattattttctttagaagaaacttccaaaacagtatcatccctcattttgtttaaagaaaaccaagtagttccgcaggtttgaggtaaaggaaaacatgcagggtgtggtataagaccctctttaagttcagaaaacgctttacttaggccaggctaagtagtaacttaaaaggctaaagggtttaacataaaccgaaacaagatctttcggtgaaacaattcccaatcctttcactatcttggattattgatatcggttagaaagaaatgggcatcttctcgtattagatatttatacattctactgcacttgtactctggaacaggttgcagaacgacaaggcaagtatctagctcacctgcttaaccatgtcatgaaagctggaggagggcatgcgaactgtgagatcgacgttgatctaggtcctgcctttgtgtataagcatctggggagcatggcaactgtcggaagatacaaagctctagtcgatctgaggcaaagcaaggctggttactgtttctgtctgtaaaaaaaacttgcattgttctaaacttctgacgagttaactgaaattgtccctttattgtcaggaatcgaaagggatatctcttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0830100, RefSeq:Os01g0830100