Difference between revisions of "Os01g0886200"

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(Created page with "{{JaponicaGene| GeneName = Os01g0886200| Description = Similar to AGAMOUS homolog| Version = NM_001051563.1 GI:115441496 GeneID:4324888| Length = 4207 bp| Definition = Or...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0886200|
 
GeneName = Os01g0886200|

Revision as of 19:03, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0886200

Description

Similar to AGAMOUS homolog

Version

NM_001051563.1 GI:115441496 GeneID:4324888

Length

4207 bp

Definition

Oryza sativa Japonica Group Os01g0886200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40256727..40260933

Sequence Coding Region

40256826..40256903,40257691..40257893,40258966..40259047,40259240..40259304,40259502..40259601
,40259888..40259929,40260074..40260115,40260239..40260520

Expression

GEO Profiles:Os01g0886200

Genome Context

<gbrowseImage1> name=NC_008394:40256727..40260933 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:40256727..40260933 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gttgtcttctccaatctccactccccacccatcgatcaactcacagctcgatccagccccctccagatcttcagatcggtggatcgattgatcaacatggggagggggaagattgagataaagagaatcgagaacaagacgagccgtcaggtgaccttctgcaagcgcaggaatgggctgctgaagaaggcctacgagctcgccatactctgcgacgctgagatcgcactcatcgtcttctccagccgaggacgcctctatgagttctccaatgtaaacagcacaaggtcaacaatcgagaggtacaagaaagcctctgccagcacttcaggatccgctccagtgatagacgtcaattctcatcaatactttcagcaagaagcagcaaaaatgcgccaccagatacagaccttgcagaatgcaaacaggcacctcatcggtgagtccattggcaatatgaccgcaaaggagctcaagagccttgaaaatcggcttgaaaagggcatcagccgaattcgatcaaagaagcatgagctgctgttctcggagatcgaatacatgcagaaaagggaagcagatcttcagaacgagaacatgttcctgagagccaaggtggcagaggccgagcgagctgaacatgatgatcagcaggcggcggaggacgacgagatggcgccggcgccggcggtcggcggcgggtcatcgtcggggacagagctggaggcgctgccggcgacgttcgacacaagggaatactaccagccggcgccgccggtgagcatgctggccgccgcggcggcggcggcggcggcgcagtactcgtcggaccaccaccagactgctctccacctcggctacttcaaggtcgactccggcaaaggcggcctcctctag</cdnaseq>

Protein Sequence

<aaseq>VVFSNLHSPPIDQLTARSSPLQIFRSVDRLINMGRGKIEIKRIE NKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEFSNVNSTRSTIERY KKASASTSGSAPVIDVNSHQYFQQEAAKMRHQIQTLQNANRHLIGESIGNMTAKELKS LENRLEKGISRIRSKKHELLFSEIEYMQKREADLQNENMFLRAKVAEAERAEHDDQQA AEDDEMAPAPAVGGGSSSGTELEALPATFDTREYYQPAPPVSMLAAAAAAAAAQYSSD HHQTALHLGYFKVDSGKGGLL</aaseq>

Gene Sequence

<dnaseqindica>100..177#965..1167#2240..2321#2514..2578#2776..2875#3162..3203#3348..3389#3513..3794#ataatgtgcatcagccataactaccagcacacacaacgactacccttctttaaaaggaaacctcacagagcccaaggcttctccatgccgttgccctaagttgtcttctccaatctccactccccacccatcgatcaactcacagctcgatccagccccctccagatcttcagatcggtaagaaaaccgtagtgaaagctagctctttctctctctctgcagattgattggatggagtagtatttgcttttctttgcgccattttgtgctgttcttttggggcagatttgttgagaaacagcaagccctagggcctgcaacgagctgatggaaaggggaaattgaaacataagcagctgcagcaagctgcttgctagatcttgttgtgttgccatttctgcggttctctcctttgccctcttctagctatgcttcttgttcttggaacttgtggttcttttgggggggggggggggggggttcttcaagtgctatatatggatgaggtgttcaaatggataatttgctcctgaaatttcttcttttgctctaaagtcttgtccatctttgatgaagttatgttaattatttccccttcttgaatctttgagttaaggttcttttcgtgttagatcgttcagaacttcagatcgatgctgatgaagattcaaatggtgaacttgagactgaagtttagcgattgaactaagtaataacgataagacatgaatttgtaaaaatccgtgattattcaagattttggttggaccaatatttcctctgaacaaaccaaaaacaatatatgttgtgctttcctagctagatagctaggaatttcttgctttattatatgctgataagtttatgcgcttttactccctttatcttgcttaattgcttctgccatgaattgctaagagggaggtgttgcatggttgtacatgtacatgtttaatttgtgaaggtggatcgattgatcaacatggggagggggaagattgagataaagagaatcgagaacaagacgagccgtcaggtgaccttctgcaagcgcaggaatgggctgctgaagaaggcctacgagctcgccatactctgcgacgctgagatcgcactcatcgtcttctccagccgaggacgcctctatgagttctccaatgtaaacaggtataagtatgcatcatgcatgcatccccatccaccattgcacttcatttaattaatttgctatctgcaacttaattggaaacaattaaagggcaccacacttgactcatgtgtgtgtgtgtgtgtataattaagttgtgactgatcataaagcatttaagcttagatgttttgctgagatagattcaagatgggcggactagtagtgtagtttgtcagttagcagatgcttaattatgagcttattactagtgtacattagtatatctctgtgcaatttgtgtggatcttggaaatggacaacctgtaacagccttgggctagatcttgttcattcatgaaattatacctccacaatcagtccatggtcaaaattagaacacaagggacttgaaggagtaatccattccaagctttcagtcttgagatgtctcaggcagccagtcttgaaatgttgccaggcaagccggcccctgaaaaagctctcgtttcattttatgtgcactgacaagtactcgctatctgatatttctctatctctcggagagagaatgtatgttgcatggggaaggaaattgcaggttgtccctgttcatcttccttggcagtgctaaagagcgttaaagaacgccattgactgtgcctgtgtttttgcagcgagtatggagtattaattcaaatgatgtatctttggcccctctgcatcttttggtgcaacgtaaaggccacaaatatatatacatctgtgacacgtcgtagtgcaaacctatctggagtgaatctttgaatgtgtatcaagtattgcatggtctgctaccttgtgctgtaggctctagcaaagctagggggacagcatacgcatacatgcatgcatgcagcatgcattttactagtagttttttttttttatgttctgctgaagttggtttctgaagctatctttcagttccatttcggtatatatcatgtcatttttctgctaaaaaaatgaagatttgctaattttcatcaaacaatggtttaataatttgtgaaactatactgcttcgttttgacaacacatttggttcagcacaaggtcaacaatcgagaggtacaagaaagcctctgccagcacttcaggatccgctccagtgatagacgtcaattctcatgtaagttgttttgtattcattaattggttatatactgtatatccatatgtataatatatatagcacgcatcgtttatatatttaatttggcctgaaattttacccgtaaataactaaatatactacatacattgtgagatttgtgtgttatcttgagccctctaaaatccagtactgggtatcttcacacagcaatactttcagcaagaagcagcaaaaatgcgccaccagatacagaccttgcagaatgcaaacaggtaattaagcccttaaatccaacatctcgtattgtgatagcttatggctatagcacaatatatattatgcgtctcatgtctgagttaaaaaaagatccatctcatgctgtcatgcatgcatgatgaacgcgtatatagtatatctgaaagtgttcatatatttcatatatattaattgcaatatataatcttgtcaggcacctcatcggtgagtccattggcaatatgaccgcaaaggagctcaagagccttgaaaatcggcttgaaaagggcatcagccgaattcgatcaaagaaggtgaaaatatatataatcgagacaccatgagcacatgctaattataatcaatggattatatatatgtcaacaatgcaagaagatctttgaaatattaattgcagatttataaattatgcgaagaaatttcttgtgtagtaatatgatttcaccaggggttattaatagttggatttgcttaattatactgaactgacaataatacacgtacactatcaatttcaccctgattaattaatctatatatgtctaatttgattcctgattttttccccccacttttcagcatgagctgctgttctcggagatcgaatacatgcagaaaagggtatgcctcgctaaatcgaatactcagatacactatcaaaatttgcatatgcacacgcttaattacttattgtttaatttatttctcccttgcaataatgtacatgatcacacaatgtctttcatgtttcctcatcgcgtgcaggaagcagatcttcagaacgagaacatgttcctgagagccaaggtgagttatccttacactgtcaataatcatgacctgcatactgtaaaaattaaacaacttagttaagtcattagtgatattactactgacagtaattaatttatcgattttacattcgtacaggtggcagaggccgagcgagctgaacatgatgatcagcaggcggcggaggacgacgagatggcgccggcgccggcggtcggcggcgggtcatcgtcggggacagagctggaggcgctgccggcgacgttcgacacaagggaatactaccagccggcgccgccggtgagcatgctggccgccgcggcggcggcggcggcggcgcagtactcgtcggaccaccaccagactgctctccacctcggctacttcaaggtcgactccggcaaaggcggcctcctctagatcgatcgccatggatgcaaatattgcatgcattcgatcgaattatactgtattccgtaagagcgacgacgatgaagatgacaataattattgtggtattgtacgtatagtacgctggtagacctacgtatacgtatacgtatgtatgatgaagaataaggtggtgtttggttggaggggctaaagtggggctaaactttagttcctctcacaaaaatataagttcctattatagagacttatatttttgtgagagagactaaatttagtcctagttcccaaacacccctaatatacatttgtggtgtgcatgcatggtgtgtgggtactatatgatcagagtgtgctgcatatgcgtattccgtttgctagctctgacatgcatttgtctaaatatatatttttatttatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0886200, RefSeq:Os01g0886200