Difference between revisions of "Os01g0888300"

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(Created page with "{{JaponicaGene| GeneName = Os01g0888300| Description = Similar to NAC-domain containing protein 18 (ANAC018) (NO APICAL MERISTEM protein) (AtNAM)| Version = NM_001051573.1 ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0888300|
 
GeneName = Os01g0888300|

Revision as of 19:03, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0888300

Description

Similar to NAC-domain containing protein 18 (ANAC018) (NO APICAL MERISTEM protein) (AtNAM)

Version

NM_001051573.1 GI:115441516 GeneID:4324898

Length

2200 bp

Definition

Oryza sativa Japonica Group Os01g0888300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40367518..40369717

Sequence Coding Region

40367628..40367952,40368042..40368310,40368801..40369565

Expression

GEO Profiles:Os01g0888300

Genome Context

<gbrowseImage1> name=NC_008394:40367518..40369717 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:40367518..40369717 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcatatgcggagggggagagcggcgggaggcgaaggagaggcagctgcggtggtggtgatgaacaggtacgacaacaacgggcatgcggcagcggcggcggcggctgcggtggcgggaggaggaggaggaggaggagggaataaggcggcgggggaggtagatgggcatgaggatgacctggtgatgcccgggttcaggttccacccgacggaggaggagctgatcgagttctacctccggcggaaggtggagggcaagcgcttcaacgtcgagctcatcaccttcctcgacctctaccgctacgacccctgggagctccccgcaatggcggcgataggggagaaggagtggttcttctacgtgcctcgggacaggaagtacaggaacggggaccggccgaaccgggtgacggcgtcggggtactggaaggcgacgggggccgaccggatgatccgagccgagaacaaccgccccatcgggctcaagaagacgcttgtcttctactccggcaaggcccccaagggcgtccgcagcagctggatcatgaacgagtatcgccttccccccgccgacaccgaccgctaccacaagactgaaatctcactatgccgcgtgtacaagcgcaccggcatcgacgacggccatggccaggtatccacggcgcggtcgtcggcgcactcccgcggcggcggcgcggcaccggtacaggacaacaagcaaggctcctcgtcgacgtccacgccgacgccgcctccaactccgtccaagctccacctcctcagcagcgagtgcacgtcgccgcccgccatcgtcacggaccacgccgccatggtggcgcacaaggcaccgtcgccgcggcaccatcagcagcagcagcagctccacgctgccaagccttgcggcggctacctgcagaattcctcgatggcttccgctgccggcggcgatcagcagcagcaatttcagcaagacttcgcggcggcattgtaccagcagtactccaagaacacgagcggtgccttcgcctccacgtactcgctgctcaacctcgtcaacgcggcatccatgggcagctccgccgctgccattgatgagctgagctcgctggtgggccacggcacgccgtcctacattaaccccgcggccggcagccacaactatagtcaattccttcacctgcctacgacgccgtcgtcgcatcaaccaacgccggcgccgctcgggacgacgacggcggcagcggcggcgacgctgccgatgtcgctcgccgccttctccgacaggatctgggactggaataatccgatccccgaggccggaggtagggattacagcaccagtactggattcaagtga</cdnaseq>

Protein Sequence

<aaseq>MHMRRGRAAGGEGEAAAVVVMNRYDNNGHAAAAAAAAVAGGGGG GGGNKAAGEVDGHEDDLVMPGFRFHPTEEELIEFYLRRKVEGKRFNVELITFLDLYRY DPWELPAMAAIGEKEWFFYVPRDRKYRNGDRPNRVTASGYWKATGADRMIRAENNRPI GLKKTLVFYSGKAPKGVRSSWIMNEYRLPPADTDRYHKTEISLCRVYKRTGIDDGHGQ VSTARSSAHSRGGGAAPVQDNKQGSSSTSTPTPPPTPSKLHLLSSECTSPPAIVTDHA AMVAHKAPSPRHHQQQQQLHAAKPCGGYLQNSSMASAAGGDQQQQFQQDFAAALYQQY SKNTSGAFASTYSLLNLVNAASMGSSAAAIDELSSLVGHGTPSYINPAAGSHNYSQFL HLPTTPSSHQPTPAPLGTTTAAAAATLPMSLAAFSDRIWDWNNPIPEAGGRDYSTSTG FK</aaseq>

Gene Sequence

<dnaseqindica>111..435#525..793#1284..2048#atccctttctctcttcttccgccgccgcgtcctcctccccaacttgaacactactactactcccccacggcgagctcgcgttctccgggatcaactagccctagcgacggatgcatatgcggagggggagagcggcgggaggcgaaggagaggcagctgcggtggtggtgatgaacaggtacgacaacaacgggcatgcggcagcggcggcggcggctgcggtggcgggaggaggaggaggaggaggagggaataaggcggcgggggaggtagatgggcatgaggatgacctggtgatgcccgggttcaggttccacccgacggaggaggagctgatcgagttctacctccggcggaaggtggagggcaagcgcttcaacgtcgagctcatcaccttcctcgacctctaccgctacgacccctgggagctccccggtaattagttagttactctccgcctcgatcatatcaatcgattgatttaggaattgagcatctaattaacaagctcgatgggggtgcagcaatggcggcgataggggagaaggagtggttcttctacgtgcctcgggacaggaagtacaggaacggggaccggccgaaccgggtgacggcgtcggggtactggaaggcgacgggggccgaccggatgatccgagccgagaacaaccgccccatcgggctcaagaagacgcttgtcttctactccggcaaggcccccaagggcgtccgcagcagctggatcatgaacgagtatcgccttccccccgccgacaccgaccgctaccacaaggtacccatccatccatgaatctactcgcgcttcgtcttcctcgatcgatctctccttctcatccaattaatttgtaggggattgaattctcagtactagggttagaggagttcttgtgttgttgattctgcttgcttttagttgcactgctagctggcgctcatggtttgcccatgaattctagcggtagtatttaagagtgggtatgattagggtttcatgattcttctttctttgggtgctgattttttttggggtgttcgtcatgagtatgcataattgagtgatagaatatgcacctactcgatcacttcgatccctagatgctatatatcttgaatatatgggggcctagaatcctagattcctcaatcattctgagctgaatttctcacaaactttcagtaatcagtaagatgctaagatctgaactgaatttcagtgaaaaattaacccctatcctgatcttctcgcgtccatgaaattgcagactgaaatctcactatgccgcgtgtacaagcgcaccggcatcgacgacggccatggccaggtatccacggcgcggtcgtcggcgcactcccgcggcggcggcgcggcaccggtacaggacaacaagcaaggctcctcgtcgacgtccacgccgacgccgcctccaactccgtccaagctccacctcctcagcagcgagtgcacgtcgccgcccgccatcgtcacggaccacgccgccatggtggcgcacaaggcaccgtcgccgcggcaccatcagcagcagcagcagctccacgctgccaagccttgcggcggctacctgcagaattcctcgatggcttccgctgccggcggcgatcagcagcagcaatttcagcaagacttcgcggcggcattgtaccagcagtactccaagaacacgagcggtgccttcgcctccacgtactcgctgctcaacctcgtcaacgcggcatccatgggcagctccgccgctgccattgatgagctgagctcgctggtgggccacggcacgccgtcctacattaaccccgcggccggcagccacaactatagtcaattccttcacctgcctacgacgccgtcgtcgcatcaaccaacgccggcgccgctcgggacgacgacggcggcagcggcggcgacgctgccgatgtcgctcgccgccttctccgacaggatctgggactggaataatccgatccccgaggccggaggtagggattacagcaccagtactggattcaagtgaatcagctatagctacagttcatgcacgcgtgcatggcattctgatcagatggtaccaccatgtactacctctctctctctctctctctctctctctctctctctgtgtgtcccactctctggttcacagttattaattctgatgaaacgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0888300, RefSeq:Os01g0888300