Difference between revisions of "Os01g0901900"

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(Created page with "{{JaponicaGene| GeneName = Os01g0901900| Description = Nucleic acid-binding, OB-fold domain containing protein| Version = NM_001051649.1 GI:115441668 GeneID:4325010| Lengt...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0901900|
 
GeneName = Os01g0901900|

Revision as of 19:04, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0901900

Description

Nucleic acid-binding, OB-fold domain containing protein

Version

NM_001051649.1 GI:115441668 GeneID:4325010

Length

4420 bp

Definition

Oryza sativa Japonica Group Os01g0901900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41026420..41030839

Sequence Coding Region

41027281..41027284,41027368..41027411,41027534..41027710,41027844..41027936,41028077..41028143
,41028283..41028356,41028595..41028676,41028770..41028843,41028942..41028971
,41029063..41029122,41030112..41030813

Expression

GEO Profiles:Os01g0901900

Genome Context

<gbrowseImage1> name=NC_008394:41026420..41030839 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:41026420..41030839 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccactccggccaccgccaccttcccgcacctcggcctccgccccaagcccctcctcaggcgccgcctccgccgcatcgccgtctccgtctccccctccggccccgacgagacccccgcggatgacccgccggtgatcccctcgatcctcgtcaagaacaccgagcccgaggacgtcgcccgccgccggagctgggtggagcacgggtgggcgccgtgggaggagatcatgacccccgaggtcgcgttcgcgcggcacagcctcaacgaaggggaggaggtgccgctccagacgccggagtcgcaggaggcgttccggatgctcaccccggcgtaccgggagaaggtggagtccgagcccgggtacgaggagcgcctcttcgccacgcgcgacacgcccgagcccctcgagacctcgtgggccggcgagctcccgctccggctcgtgccgccgcgggactggccgccgccggggtgggaggtggaccccggcgagctggagttcatcagggaggcgcacagggagttcacggagaggctggacatggcggcggtggcggccaagggggtgacgcacgtggacaaggtggagaacgcgccggatgatctggggctggatcgatacaagatgttcttgaagcagtacaaggaatgggtggaagccaatcgggacaggttggaggaggagtcctacaagtttgatcaggattactaccctggcagacggaaaagaggtgaggactacaaagaggacatgcttgaactcccgttcttctatcctggacagatctgtcgtggtcgagtgatcagtgttcacctctatcagggagcttttgtggacatcggttgtgttcatgatgggtgggtaccaataaaaggaaatgattggtattggatccgtcatcacatcagacctggcatggaagtccatgtagagattctggccaaacgagatccctaccgcttccgtttcccactcgaaatgcgctttgtatatcctaacattgatcatctaatattcaataggttcgactatccaccaatatttcaccgcaaggaagatactaacccagagcagttgtggcgtgaaggtggaagaccacctattcctaggaaaaaacctttgaaagatatggagaaagaacctttggtatcagaccacccctttgttgaaacgctttggctgtggcataatgcagagcaaatgattttagaccatgaggaggaaaatccagataaattcaaggatacgacatatgagtccacagttgatagttccattgttcatgaagaaaatagagttcaacatactgaagggtatttcaaagacacactgctgaaaaaggaagttgtgatatcaaggagcttgatctggatgccgctcgtgctgagcgtcagctga</cdnaseq>

Protein Sequence

<aaseq>MAATPATATFPHLGLRPKPLLRRRLRRIAVSVSPSGPDETPADD PPVIPSILVKNTEPEDVARRRSWVEHGWAPWEEIMTPEVAFARHSLNEGEEVPLQTPE SQEAFRMLTPAYREKVESEPGYEERLFATRDTPEPLETSWAGELPLRLVPPRDWPPPG WEVDPGELEFIREAHREFTERLDMAAVAAKGVTHVDKVENAPDDLGLDRYKMFLKQYK EWVEANRDRLEEESYKFDQDYYPGRRKRGEDYKEDMLELPFFYPGQICRGRVISVHLY QGAFVDIGCVHDGWVPIKGNDWYWIRHHIRPGMEVHVEILAKRDPYRFRFPLEMRFVY PNIDHLIFNRFDYPPIFHRKEDTNPEQLWREGGRPPIPRKKPLKDMEKEPLVSDHPFV ETLWLWHNAEQMILDHEEENPDKFKDTTYESTVDSSIVHEENRVQHTEGYFKDTLLKK EVVISRSLIWMPLVLSVS</aaseq>

Gene Sequence

<dnaseqindica>3556..3559#3429..3472#3130..3306#2904..2996#2697..2763#2484..2557#2164..2245#1997..2070#1869..1898#1718..1777#27..728#ccgtcgtccccaaaacccgagcaagaatggcggccactccggccaccgccaccttcccgcacctcggcctccgccccaagcccctcctcaggcgccgcctccgccgcatcgccgtctccgtctccccctccggccccgacgagacccccgcggatgacccgccggtgatcccctcgatcctcgtcaagaacaccgagcccgaggacgtcgcccgccgccggagctgggtggagcacgggtgggcgccgtgggaggagatcatgacccccgaggtcgcgttcgcgcggcacagcctcaacgaaggggaggaggtgccgctccagacgccggagtcgcaggaggcgttccggatgctcaccccggcgtaccgggagaaggtggagtccgagcccgggtacgaggagcgcctcttcgccacgcgcgacacgcccgagcccctcgagacctcgtgggccggcgagctcccgctccggctcgtgccgccgcgggactggccgccgccggggtgggaggtggaccccggcgagctggagttcatcagggaggcgcacagggagttcacggagaggctggacatggcggcggtggcggccaagggggtgacgcacgtggacaaggtggagaacgcgccggatgatctggggctggatcgatacaagatgttcttgaagcagtacaaggaatgggtggaagccaatcgggacaggttggaggaggagtcctacaaggtaaagccgttaattttgttcgatcatttgtgtgatggtttgatttaactgggaatttgcgtttgactgtgcattgtgttagttagatgtagaagtgttcatgctttagtggtctgtgcctgtaattagatatctgcagaccaattgcttcagttcacattggttatggaacgtgttggcatgctgctaattactatgataattatcagaggtgataagttcacaaaggatggaagaaatacctgtagaatgtaacagtagtccaaaatcattattctggtaataactagatagttgaaaataaacctttttagtgattactgcagtggtttattgtgaatttgtgatatcttaataaaagtattttacatttgtatgaacagtctactattatcagaaaacctagacaacggtatcccgttggaacgggatacccttatatgagacttacctaatacctaatacctgttgtggtaccagctgcatggtaccctatacctgtgatacctgttacccggtacctgtgatacctaggacctgatacctgtgatactcgtgcaagagaatagttaatatatctatcccgttgcaacgggatccccttttgtagcggccctctactattattgtattttcttatcacttaaaaaaagttccttttcgacccaaaaaaaaaaactgttatggtgttcagaaccccctcagatgcctatttccttgtacgtcatgaacacctgtgtcctaaactcttaggttcgatgttggcaagttgttttgttattcatttgagtggctcggtattgtctgttttatgctctcttcagagagaggcacgtcagataaccatgggttgattttatctcctgtaactaagctttgtttgttggtttagacctttagtttaggggttgagtctcacttgtcatctttaagagtatttgtagtgttctaggcggtaatacccctctttggctatttttgtcgtgcagtttgatcaggattactaccctggcagacggaaaagaggtgaggactacaaagaggacatggtatgttcattacctcttgacaattcactgcctggtcaattttaatttcttgatattattagttcctgatgtcttgattgcttttatgcagcttgaactcccgttcttctatcctggacaggtttgctagaagttctgattgtactctcattcttcagcaatttgttgactgttctcgcccttaaattctgattgtttggttgaatgcatctcatgcagatctgtcgtggtcgagtgatcagtgttcacctctatcagggagcttttgtggacatcggttgtgttcatgatgggtatggtttcttgttctgatatacaattgtggacctggtatacttatttgtgaaagaattctgcgtgccatttacatctcattatttgtttaggtgggtaccaataaaaggaaatgattggtattggatccgtcatcacatcagacctggcatggaagtccatgtagagattctggttagtgatctcaaatttcactcttacagtggttaatgatatgatggcagcaatacaaaagattaaggaaatatttaagaagttcgcattgctaagtgaatatgccaattgtgtcttttcaatttgcattaactgaaaatgaatttatttttcatagaaaaagttttattcctttgttgcctgagttgtggaaatttctttaattaattaatggagcttgtataactgtatgatgcaggccaaacgagatccctaccgcttccgtttcccactcgaaatgcgctttgtatatcctaacattgatcatctaatgtgagtatcatcatttgaaatgcgtgtgccaatgatttctgacaatctggaggtttcagtgccctgtgtcttgtgcatttcttcagtttgtttttagttgactaactgtttgtcatcttatttttctttctaaccgcagattcaataggttcgactatccaccaatatttcaccgcaaggaagatactaacccagagcagttgtgggtgtgacctctgtcctcctgaatccataattttgttgaacttaataatttgtgcattctcacgtactagttttgcctaatgaaatgcatactcttcagtattgtgctgtgcatgcatctgactcgtatatgcactgacagcgtgaaggtggaagaccacctattcctaggaaaaaacctttgaaagatatggagaaagaacctttggtatcagaccacccctttgttgaaacggtatctcttgaccatgtctcaaatgataacatgcttatcatgcctctcgccacctatataagcatcctctggcagctttcatgccttgtttccttctattcctgtattaaattgatcctttttttgtttgcagctttggctgtggcataatgcagagcaaatgattttagaccatgaggaggaaaatccagataaattcaaggatacgacatatgagtccacagttgatagttccattgttcatgaagaaaatagagttcaacatactgaagggtatttcaaagacacactgctgaaaaaggaagttgtggtacgcagtcatacgtagctactgattactagctttcaattatcgtagggtgttttttttacagtacaatgatcccccaatgacattctggttgtgttctgaactcttctgttagaatatagatatcaaggagcttgatctggatgccgctcgtgctgagcgtcaggtaccctttccctcatagcgaggacaattctttattgatcactcgctatttcctttcaacatactgaagtttaatttctgcagctgataaaaaaactaagaaaggaagcagaggaaagaggagaggaatacaaagtagggaagctccgacgaaacaaagaaatggatgagtacgatctaatgcaatggcgccgttctttcgaagagcgggaagctcttatcagagacatatgctggtaattgcaactaatgttactactgctacaaatttgatgccaccgaatgtatatccactaactcaaaaattggcagccgtaaagcatttgggcttcctgtcgacgaacctgggcgatatgacgtggatgagaccgaagtttatggcaaagattactacgacccgagtaagcctatgtaccgctacgactactggggagagcccaagaacaccgagaagaccaagctagagagggaggtggagcttcacaaccagcaggttatcggagacgcgaagaaatggtgcgagatgtcgtacgacgactatgtccggcagaaggtgcggatggaagccgctgaagccagggagaggcagaggaaggcatcggagccacaggaggaggacgagaagtatgaggatgagatggaccttgacttgaagaagatgatggatccccaggcgccacacaatcggtgtttcatcacaaaatgacaggttagaatgttaggcacactatgatttagacatagtagctctttttttgggtgttgtatgtgcaaattttgtaggagatgtaacactgttgatgatagaccagcaatatgctttgcctggcatagccctggatgaagccacagttgaagctagactgctagaggctatgctgtttgcttggtcacctgttcaaagctgtaattttggcaattttatgtgtgatggttttctgaagaatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0901900, RefSeq:Os01g0901900