Difference between revisions of "Os01g0909600"

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(Created page with "{{JaponicaGene| GeneName = Os01g0909600| Description = Retrotransposon gag protein family protein| Version = NM_001185773.1 GI:297720680 GeneID:9268808| Length = 3438 bp| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0909600|
 
GeneName = Os01g0909600|

Revision as of 19:04, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0909600

Description

Retrotransposon gag protein family protein

Version

NM_001185773.1 GI:297720680 GeneID:9268808

Length

3438 bp

Definition

Oryza sativa Japonica Group Os01g0909600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41372993..41376430

Sequence Coding Region

41373469..41374464

Expression

GEO Profiles:Os01g0909600

Genome Context

<gbrowseImage1> name=NC_008394:41372993..41376430 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:41372993..41376430 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatccattgaaaggggttgaggaatcatcgctggtcactaaaggcgagatgaaaagcctactacaagacttgatagctactgggatgatggggcctagaataggaggggcatcacctgaaataaagctagagcaaatgccgaatgaagttaagttggaggagagccaaaattacttgagctggtctagaaggacaagattgatgttgagggcaaaaggggtagaacactatttggaggaaacttgtattgaaccagatgacaagcttagtgtggactggaaggtgtggaattccaccaactctacggtggcaacatggttaatgacctcagtggctccatccattgcgaggatggtggagacaatttctaatgcatcaactgtgtggaagacattgagcaaaatgtactcaggggaagacaatgcaatgatgatggttgaggctcaagacaaggtggagaacttgaagcaagagggaagaactgttcaagaatatgctagtgagttgcaacaattatgggcagatttggatcactatgagagggggactgggaggaggattgggactggagtcaggcgcaatgggttgtggtacatcaataatgaagaagtaggattggctgcagttgcaggaaatgctgaggagattattttgcttcattgccggttaggacatccatcatttgataacgtaagtaagctatatccaattctctttaatggagtgaacaaaagtagacttgtctgtgacgcttgcgaatttggcaaacatacacggaccccatatgttgggagtggcctccgtagttatgaaccctttatattaatacattatgatgtttggggaccatggccagttactttagtgagtggatttaagtggtttgtttccttcattgattgttacactcgaatgacttggatttatgtacttaagcacaagaatgatgttcttcgatgcttccaagattttcataaattcaaatcagtttga</cdnaseq>

Protein Sequence

<aaseq>MDPLKGVEESSLVTKGEMKSLLQDLIATGMMGPRIGGASPEIKL EQMPNEVKLEESQNYLSWSRRTRLMLRAKGVEHYLEETCIEPDDKLSVDWKVWNSTNS TVATWLMTSVAPSIARMVETISNASTVWKTLSKMYSGEDNAMMMVEAQDKVENLKQEG RTVQEYASELQQLWADLDHYERGTGRRIGTGVRRNGLWYINNEEVGLAAVAGNAEEII LLHCRLGHPSFDNVSKLYPILFNGVNKSRLVCDACEFGKHTRTPYVGSGLRSYEPFIL IHYDVWGPWPVTLVSGFKWFVSFIDCYTRMTWIYVLKHKNDVLRCFQDFHKFKSV</aaseq>

Gene Sequence

<dnaseqindica>477..1472#aggccaacaagctcattccacccctctctcaggcgttaggcagcagcagcaggaaggcgggagaaggtagcagcaggagcagcaccggcgtgcggggcagcagcagcgccgccgcgccactcggcgcgctggtagcagccccgctgcgcgcacgcgaggccctcaggttcgtgggcttcctggaggagaggagctctgtgtgcgcaagctaggaggaagaaaagacggtactgttttgggagttggatttgggactgatttgtgagcttgttgtgggaaagagagcaagtttatttctgtttctttgttgacaggtgcgggaagaagcctggtccagttatgtgatttgggttgctaagagcacaagcgaggatatgttcccgttctttgcttgctgaaaacttgatggaataagagttgccgtgattgtggtgaacacgggcagcaaggagtgttagttggcatcgctctaggagatggatccattgaaaggggttgaggaatcatcgctggtcactaaaggcgagatgaaaagcctactacaagacttgatagctactgggatgatggggcctagaataggaggggcatcacctgaaataaagctagagcaaatgccgaatgaagttaagttggaggagagccaaaattacttgagctggtctagaaggacaagattgatgttgagggcaaaaggggtagaacactatttggaggaaacttgtattgaaccagatgacaagcttagtgtggactggaaggtgtggaattccaccaactctacggtggcaacatggttaatgacctcagtggctccatccattgcgaggatggtggagacaatttctaatgcatcaactgtgtggaagacattgagcaaaatgtactcaggggaagacaatgcaatgatgatggttgaggctcaagacaaggtggagaacttgaagcaagagggaagaactgttcaagaatatgctagtgagttgcaacaattatgggcagatttggatcactatgagagggggactgggaggaggattgggactggagtcaggcgcaatgggttgtggtacatcaataatgaagaagtaggattggctgcagttgcaggaaatgctgaggagattattttgcttcattgccggttaggacatccatcatttgataacgtaagtaagctatatccaattctctttaatggagtgaacaaaagtagacttgtctgtgacgcttgcgaatttggcaaacatacacggaccccatatgttgggagtggcctccgtagttatgaaccctttatattaatacattatgatgtttggggaccatggccagttactttagtgagtggatttaagtggtttgtttccttcattgattgttacactcgaatgacttggatttatgtacttaagcacaagaatgatgttcttcgatgcttccaagattttcataaattcaaatcagtttgatgcaaatgttcgaatcattcgaactgataatgggactgagtatatcaacaacgaatttgtctcttatgtcttggatcaagggatcatacatcaaaccacttgtcctggaacccctcctcaaaatggtgtagctgagaggaagaaccgacatttgttggaggtggcacgttcacttatgtttcagatgaatgtacccaaatacttgtggaagtgatgactgctgcatatcttattaatcgcatatcttgtggagatgacaaggaagaatgatggggaccaaattagggaatttgcacgggagcaagttgaagagtctgaacaacctgagcatccagtccaagaatcctccccgtgcctctctcctccaactcccttgcccctcattgaaacgtctggtgatgttccccctatacttgaacaagtagaattacctcttacacaacgtagggaaactagaagtaatgctgggaaacctcctatacgtcttggctttgaacatattagctctaagcatgacattgcaaattatatctcatactcccacatttcacctgcatacaaaactttcattgcatcattacaagcagtgcctgttccgaaagactggagatgtgccaagcaagatcctaggtggaaagatgcaatgaaggaggagcttcatgcccttcaggagaacaagacatgggaacttgtgagacttccaccaggaaaaagagcagtaagatgtaagtgagtatttacagtaaagcaaactcctgaagggaaggtggatagatacaaagcaagatcaattgcaaaaggttatagtcaaacttatgggattgactatgatgaaacatttgctcctgtggccaagatgggtatagtgagagctttggtgtcttctgcagttaactttggatggcctctacatcagctggatgtgaaaaatgctttcctttatggtgatctacaagaggtctatatggagattccccttggatttggaaataaccaaacggtaggaaaggtatgtaaactcaagagatcattatatggtttgaagcagtctcacgtgcatggtttgatagatttaggcgtgcactatgtgagatgggatattcccaatgcaatggagatcacacggttttttatacacataagggttcatgtattaccatcttggcagtgtatgctgatgatatagtgatcaccggtgatgatgggggaagaaattaggtgcttgaaggaaatgtttggaaagacctttgaggtgaaggatcttggacctcttcgatacttccttgggattgagattgctcggtcgtcaaagggaatcgttctctcccaagggaaatatatccttgatctattggcagaaacatgaatgcttggatgtcgttcaagtgctacaccaattgataaaaatcatcaactatgtgctcagacaggtgatccagttgacaaggaggcttgtaggacgcttgatatatctgtgccatacaagacctgatatctcttatgtagtgagtgtggtaaatagatatatgcatgatcctaggtctggtcttttggaggcagctcatagaatcctaagatacttgaagggatggcactatggtgctccattgtgataataaatcagttatcagcattgcaaacaatccggttcagcatgatcacataaagcatatcgaaattgataggttgttcatcaaagagaaaattgatagtggagtgcttagcctagagtatactaaatcttgtgaacaactagctgattgtctaacaaagggattaggcccaagtgaatgagttattttgtaacaagatgggcatgatcgatatcttttgcccatcttgagggggagtgttggtgtaatatgcaactttatcagggacctgcttgtaattctgttaaataaatatatgcatgtgtgggggtactggtcagtggtgaggccaatcattccccaattcccaaatc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0909600, RefSeq:Os01g0909600